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The map label for this gene is rfbB [H]

Identifier: 150006450

GI number: 150006450

Start: 4887183

End: 4888454

Strand: Reverse

Name: rfbB [H]

Synonym: BVU_3969

Alternate gene names: 150006450

Gene position: 4888454-4887183 (Counterclockwise)

Preceding gene: 150006451

Following gene: 150006449

Centisome position: 94.68

GC content: 46.15

Gene sequence:

>1272_bases
ATGGGAAAAATAGCGATAGAGTTTCAGAATATCAGCAAGCAATATGCATTGGGAAGCATCGGAACCGGCACGCTGAGCCG
TGATTTGAATCGTTGGTGGGCGCGGATCCGTGGAAAGGAGGACCCGTATCTCAGAATCGGGGAAGAGAATGACCGTTCCA
AGAAAGCGACGGGAGATTTTGTATGGGCGTTGAAAGATATTAATTTCCATGTGGAGGAAGGTGAAGTGCTGGGTATTATA
GGTAAGAACGGTGCGGGAAAGTCCACTTTGTTGAAAATCCTTTCGCGGGTGACTTCTCCTACTGCCGGTTGTATCCGTGC
ACGGGGGCGTATTGCCTCTTTGCTGGAAGTGGGTACAGGCTTTCATCCCGAAATGACAGGACGGGAGAATATTTATATGA
ATGGTTCCATCATGGGGATGACCAAGGCGGAGATTACCCGCAAGTTGGATGAGATTGTGGCTTTCGCCGGTGTGGAGAAA
TATATCGATACTCCAGTGAAACGTTATTCTTCGGGTATGACCGTGCGGTTGGGATTTGCTATCGCCGCCCATCTGGAGCC
GGAAATTCTGGTGGTGGACGAGGTGTTGGCAGTGGGAGATGCGGAATTCCAAAAGAAGGCTATTGGCAAGATGCAGGATG
TGTCGAAAGGAGAGGGACGGACAGTCTTGTTTGTCAGTCATAACATGGCAGCGGTAAGAAGTTTGTGTACAAAAGGAATA
TGCTTGGAAAATGGTACCGCGGTTTATCAAGGGACGGTTCATTCTGCCATCGATTATTACTTGAAAGAGAAAGGGACGGT
CCGGAAAAGTAAAATTATAGATTATGTGGGTTGGACGAAAAATACGCTTCATATAGATTGCATTGAGATAAACGGAACGG
AATGTGCCTCTTCCACTATTCATGGAGGTCAGAATTTTCTGACTGTGAAAATACAGGGATATTCTGAAGAGGATATGATG
TATGATGTAATGCTGGTTTTGAAGAGCAGGACGGAAGTGCCTTATGCTACTTATGCTCCGGGACATTATTACGGGAGTAT
CAGTCATTTACCTAAAGGGGATTTTTGCATCGAGAGGCGTATAGAGCTTCCGCCTGTGCTGAGTAAAGGTGTCCTGCAGG
CAGATTTGTTTATACATCATCCTATGGTGGAATATTATTTGAAAGCAGTTCGTTGCTGTTTGCTGGAATGTGAGGGGTTT
CAAAGTGGATTCGGGCATGCACTGACACAAACGTCCAACGGCTTTATCGGATTGGAGGATATAAAAGTTTGA

Upstream 100 bases:

>100_bases
TACACGTTGGTGTTTACAGTGGTGATAATGCTTTGGGGGATGGTGACTTTTAATAGAGTGCAACGTAGTTTCATGGATGT
GATTTAAAAGAAGGGACAGA

Downstream 100 bases:

>100_bases
TCATTATGTTCTATTATGGAGATGGAGAAAAAAAGAATCGTATATAGTTTGACTGGAAGAGGGTTGTTCTCAGAGTTGTC
TAACCTTGCTTTGGCATTGG

Product: ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MGKIAIEFQNISKQYALGSIGTGTLSRDLNRWWARIRGKEDPYLRIGEENDRSKKATGDFVWALKDINFHVEEGEVLGII
GKNGAGKSTLLKILSRVTSPTAGCIRARGRIASLLEVGTGFHPEMTGRENIYMNGSIMGMTKAEITRKLDEIVAFAGVEK
YIDTPVKRYSSGMTVRLGFAIAAHLEPEILVVDEVLAVGDAEFQKKAIGKMQDVSKGEGRTVLFVSHNMAAVRSLCTKGI
CLENGTAVYQGTVHSAIDYYLKEKGTVRKSKIIDYVGWTKNTLHIDCIEINGTECASSTIHGGQNFLTVKIQGYSEEDMM
YDVMLVLKSRTEVPYATYAPGHYYGSISHLPKGDFCIERRIELPPVLSKGVLQADLFIHHPMVEYYLKAVRCCLLECEGF
QSGFGHALTQTSNGFIGLEDIKV

Sequences:

>Translated_423_residues
MGKIAIEFQNISKQYALGSIGTGTLSRDLNRWWARIRGKEDPYLRIGEENDRSKKATGDFVWALKDINFHVEEGEVLGII
GKNGAGKSTLLKILSRVTSPTAGCIRARGRIASLLEVGTGFHPEMTGRENIYMNGSIMGMTKAEITRKLDEIVAFAGVEK
YIDTPVKRYSSGMTVRLGFAIAAHLEPEILVVDEVLAVGDAEFQKKAIGKMQDVSKGEGRTVLFVSHNMAAVRSLCTKGI
CLENGTAVYQGTVHSAIDYYLKEKGTVRKSKIIDYVGWTKNTLHIDCIEINGTECASSTIHGGQNFLTVKIQGYSEEDMM
YDVMLVLKSRTEVPYATYAPGHYYGSISHLPKGDFCIERRIELPPVLSKGVLQADLFIHHPMVEYYLKAVRCCLLECEGF
QSGFGHALTQTSNGFIGLEDIKV
>Mature_422_residues
GKIAIEFQNISKQYALGSIGTGTLSRDLNRWWARIRGKEDPYLRIGEENDRSKKATGDFVWALKDINFHVEEGEVLGIIG
KNGAGKSTLLKILSRVTSPTAGCIRARGRIASLLEVGTGFHPEMTGRENIYMNGSIMGMTKAEITRKLDEIVAFAGVEKY
IDTPVKRYSSGMTVRLGFAIAAHLEPEILVVDEVLAVGDAEFQKKAIGKMQDVSKGEGRTVLFVSHNMAAVRSLCTKGIC
LENGTAVYQGTVHSAIDYYLKEKGTVRKSKIIDYVGWTKNTLHIDCIEINGTECASSTIHGGQNFLTVKIQGYSEEDMMY
DVMLVLKSRTEVPYATYAPGHYYGSISHLPKGDFCIERRIELPPVLSKGVLQADLFIHHPMVEYYLKAVRCCLLECEGFQ
SGFGHALTQTSNGFIGLEDIKV

Specific function: May form an ATP-driven O-antigen export apparatus, in association with RfbA [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27436953, Length=188, Percent_Identity=29.7872340425532, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI153792144, Length=205, Percent_Identity=26.3414634146341, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI6005701, Length=190, Percent_Identity=25.7894736842105, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI27477115, Length=190, Percent_Identity=25.2631578947368, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI31657092, Length=199, Percent_Identity=30.6532663316583, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI105990541, Length=195, Percent_Identity=28.7179487179487, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI27262624, Length=204, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI27262626, Length=204, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI150417984, Length=188, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI45446740, Length=205, Percent_Identity=27.3170731707317, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI47078218, Length=205, Percent_Identity=27.3170731707317, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI30795238, Length=195, Percent_Identity=26.1538461538462, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI27881501, Length=197, Percent_Identity=25.8883248730964, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI116734710, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI21536376, Length=203, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1786398, Length=244, Percent_Identity=25, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789032, Length=226, Percent_Identity=26.5486725663717, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788450, Length=206, Percent_Identity=27.6699029126214, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788225, Length=213, Percent_Identity=29.1079812206573, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87081709, Length=192, Percent_Identity=23.9583333333333, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788210, Length=261, Percent_Identity=28.3524904214559, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=23.175965665236, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1790467, Length=207, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=25.4807692307692, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=240, Percent_Identity=25.4166666666667, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI48995001, Length=204, Percent_Identity=25.9803921568627, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=206, Percent_Identity=25.7281553398058, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=213, Percent_Identity=26.7605633802817, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789891, Length=215, Percent_Identity=22.7906976744186, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI48994943, Length=213, Percent_Identity=24.4131455399061, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787370, Length=199, Percent_Identity=22.1105527638191, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1786319, Length=234, Percent_Identity=25.2136752136752, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788506, Length=216, Percent_Identity=26.8518518518519, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=197, Percent_Identity=24.3654822335025, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87081834, Length=191, Percent_Identity=25.6544502617801, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786563, Length=193, Percent_Identity=26.4248704663212, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI87082267, Length=199, Percent_Identity=23.1155778894472, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787712, Length=244, Percent_Identity=24.5901639344262, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788165, Length=189, Percent_Identity=25.3968253968254, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI48994997, Length=215, Percent_Identity=26.5116279069767, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI87081782, Length=213, Percent_Identity=23.0046948356808, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=187, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=208, Percent_Identity=27.8846153846154, Blast_Score=76, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6321121, Length=217, Percent_Identity=29.4930875576037, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666092, Length=216, Percent_Identity=26.3888888888889, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221512771, Length=209, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24643674, Length=234, Percent_Identity=25.6410256410256, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24659289, Length=208, Percent_Identity=30.2884615384615, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007184, Length=187, Percent_Identity=25.668449197861, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221500365, Length=187, Percent_Identity=25.668449197861, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 46738; Mature: 46607

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIAIEFQNISKQYALGSIGTGTLSRDLNRWWARIRGKEDPYLRIGEENDRSKKATGDF
CCEEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCE
VWALKDINFHVEEGEVLGIIGKNGAGKSTLLKILSRVTSPTAGCIRARGRIASLLEVGTG
EEEEEECEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
FHPEMTGRENIYMNGSIMGMTKAEITRKLDEIVAFAGVEKYIDTPVKRYSSGMTVRLGFA
CCCCCCCCCEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEE
IAAHLEPEILVVDEVLAVGDAEFQKKAIGKMQDVSKGEGRTVLFVSHNMAAVRSLCTKGI
EEECCCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCE
CLENGTAVYQGTVHSAIDYYLKEKGTVRKSKIIDYVGWTKNTLHIDCIEINGTECASSTI
EECCCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCHHCCCCC
HGGQNFLTVKIQGYSEEDMMYDVMLVLKSRTEVPYATYAPGHYYGSISHLPKGDFCIERR
CCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEECC
IELPPVLSKGVLQADLFIHHPMVEYYLKAVRCCLLECEGFQSGFGHALTQTSNGFIGLED
CCCCCCHHCCCHHHHHHEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCEEEEEE
IKV
CCC
>Mature Secondary Structure 
GKIAIEFQNISKQYALGSIGTGTLSRDLNRWWARIRGKEDPYLRIGEENDRSKKATGDF
CEEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCE
VWALKDINFHVEEGEVLGIIGKNGAGKSTLLKILSRVTSPTAGCIRARGRIASLLEVGTG
EEEEEECEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
FHPEMTGRENIYMNGSIMGMTKAEITRKLDEIVAFAGVEKYIDTPVKRYSSGMTVRLGFA
CCCCCCCCCEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEE
IAAHLEPEILVVDEVLAVGDAEFQKKAIGKMQDVSKGEGRTVLFVSHNMAAVRSLCTKGI
EEECCCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCE
CLENGTAVYQGTVHSAIDYYLKEKGTVRKSKIIDYVGWTKNTLHIDCIEINGTECASSTI
EECCCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCHHCCCCC
HGGQNFLTVKIQGYSEEDMMYDVMLVLKSRTEVPYATYAPGHYYGSISHLPKGDFCIERR
CCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEECC
IELPPVLSKGVLQADLFIHHPMVEYYLKAVRCCLLECEGFQSGFGHALTQTSNGFIGLED
CCCCCCHHCCCHHHHHHEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCEEEEEE
IKV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]