| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is phoP [H]
Identifier: 150006437
GI number: 150006437
Start: 4873781
End: 4874146
Strand: Direct
Name: phoP [H]
Synonym: BVU_3956
Alternate gene names: 150006437
Gene position: 4873781-4874146 (Clockwise)
Preceding gene: 150006431
Following gene: 150006438
Centisome position: 94.39
GC content: 39.62
Gene sequence:
>366_bases ATGAGAAAGAAAATTTTGGTCTTGGACGACAAAATAGCAATTGCAAAAGTCCTTTCAATCTATCTGGCCAGTGATTATGA TTGTATTTGGTTACCGAATGGCATCGAAGGGGTAAAATGGCCTCAGGAAGGTAACATACCAGATTTGATTATATCAGATA TCCGTATGCCCGAAATGCGTGGAGACGAGTTTCTGGAATGGATAAAATCCAATCAGTTATTCAAACACATTCCGGTGGTT ATGCTAAGCAGCGAAGACAGTACCACAGAACGCATCCGCCTGTTACAAGAAGGCGCGGAAGACTATATTGTCAAACCTTT CAATCCCATGGAGTTAAAAGTAAGAATTAAGAAAATCATTGAGTAA
Upstream 100 bases:
>100_bases TAAGGAAAAGCAATCTTTACGCCAAAAAATTAATAGAATAAAGTTGTTTATTCACAATAATTTTCTTTACTTTTGCCCAT TAAAATCTAAAGATTACTCT
Downstream 100 bases:
>100_bases ATCAGCATGACCTTTCTGCTTTATATAGGAAAGAACAAGGATTTTTTGCGTAAATTCAGCAAGCTCGAAAATGTCCAGAT GATTTATGCCCAAAACTACC
Product: putative two-component system response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MRKKILVLDDKIAIAKVLSIYLASDYDCIWLPNGIEGVKWPQEGNIPDLIISDIRMPEMRGDEFLEWIKSNQLFKHIPVV MLSSEDSTTERIRLLQEGAEDYIVKPFNPMELKVRIKKIIE
Sequences:
>Translated_121_residues MRKKILVLDDKIAIAKVLSIYLASDYDCIWLPNGIEGVKWPQEGNIPDLIISDIRMPEMRGDEFLEWIKSNQLFKHIPVV MLSSEDSTTERIRLLQEGAEDYIVKPFNPMELKVRIKKIIE >Mature_121_residues MRKKILVLDDKIAIAKVLSIYLASDYDCIWLPNGIEGVKWPQEGNIPDLIISDIRMPEMRGDEFLEWIKSNQLFKHIPVV MLSSEDSTTERIRLLQEGAEDYIVKPFNPMELKVRIKKIIE
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=129, Percent_Identity=34.1085271317829, Blast_Score=72, Evalue=1e-14, Organism=Escherichia coli, GI1788394, Length=118, Percent_Identity=30.5084745762712, Blast_Score=60, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 14085; Mature: 14085
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKILVLDDKIAIAKVLSIYLASDYDCIWLPNGIEGVKWPQEGNIPDLIISDIRMPEMR CCCCEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEHHCCCCCCCC GDEFLEWIKSNQLFKHIPVVMLSSEDSTTERIRLLQEGAEDYIVKPFNPMELKVRIKKII CHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHC E C >Mature Secondary Structure MRKKILVLDDKIAIAKVLSIYLASDYDCIWLPNGIEGVKWPQEGNIPDLIISDIRMPEMR CCCCEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEHHCCCCCCCC GDEFLEWIKSNQLFKHIPVVMLSSEDSTTERIRLLQEGAEDYIVKPFNPMELKVRIKKII CHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]