| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006413
Identifier: 150006413
GI number: 150006413
Start: 4844212
End: 4845309
Strand: Reverse
Name: 150006413
Synonym: BVU_3932
Alternate gene names: NA
Gene position: 4845309-4844212 (Counterclockwise)
Preceding gene: 150006414
Following gene: 150006412
Centisome position: 93.84
GC content: 51.28
Gene sequence:
>1098_bases ATGAAAAAGCTATCCCATCAGTTTGATAAACCGAAGCGTTCTGTGGCATCTCCCGAAGCGTTGGAAGCTTTGCGGAATAA CAATGCCGTGCGTTGGTATGTGTTGTCGCTTCCCGACTGTCATCGGGGAGGAGTGCGCGGTTTGCAACGGGAACAGGACC GGCGCATACAGGCAGGCGAGCCCTCATTCGGCTTTTTTGCTCCTTCCTATCAGGAAGTGAGGCGTATAGACGGCAAATTC GTCAATACCCAGCGTCCGTTACTCTTCAACTATGTATTTGTCCGTGCTTCCGAGCGTGATGTTTTCCAACTGATGCAACG TTTTCCTGTACTCAGTTTCCTGCCTCGGGTGAGGGAACGGAAGCGGGAGTATTTTCCCTACCTTTCCGATGCCGCAATGG AGAATTTGCAGTGGGTGGCCCGTTCTTATTCCAATACACTTCCTGTTTATATACCCCAGCCGGATGGTTTGCGCAAGGGC GACCGGATACGCATTACCGAGGGACGGTTTAAGGGGGTGGAGGCGACTGTTGTCATTCAGCCGGGAGCCGGGCGAAAGGA TGTGATGGTATGTGTGGAGAACTGGATGTGGGTTCCGCTGCTGCGTGTGATGCCGGGTGAGTACGAGGTAATTGCCCTGA ATGATGAGGACAAGCATGTATATACCCGTCTGGACAATGACTGTATGTTGAATGGTTTGCACAGTGCTCTTCAGCGTTAT CACAGTGCGGAGGGGGTGAATGAGGAAGATCGTTCCCTGGCTGCCAGGGCGTTGAAAGAATATGGCAATCTCCGGATGGA TACGGATGTGATGCGTTGCAAGCTTTATGCTATTTTGTTGCCGGCTTATACTATATTGGGTATGGAAGAAGAGGCGGCAA AGCTGGTTGGCGTTATGCAGACTATGCTTCCTCTCGTCAAGGCGGAGCAGTCGCGTGCACTTGCTGTGGTTACACTTTAT GGTTGTACGGATAGCAGTATCTATTATCATTTGGCGCACGAGGCGGTTGATCCGTGGAAGAAAGAGGAAAAGCCGAAAAA GAGTAAGCAGCAGCTGATCAACCGGTTGGCTGATTATGATCGGTGGTTGAGGCATTGA
Upstream 100 bases:
>100_bases AATGAAATCTGTGTAAAATACTATTTATCAGCCAGTTATAAACACTGTGCTGATATAGTCTTCCAGTATCGGTCAGCGTG GATTTCTGACGATAAACCTC
Downstream 100 bases:
>100_bases ATATTACTGAGCAGAACAAGGATCTTAGGTTGACAGGAGAGGTTATGAAGCTTGTCCTAGAAGATTTTATAGCTTAAAGA CAAAGCTTGAGAGAAAGATG
Product: putative transcriptional regulator UpxY-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKKLSHQFDKPKRSVASPEALEALRNNNAVRWYVLSLPDCHRGGVRGLQREQDRRIQAGEPSFGFFAPSYQEVRRIDGKF VNTQRPLLFNYVFVRASERDVFQLMQRFPVLSFLPRVRERKREYFPYLSDAAMENLQWVARSYSNTLPVYIPQPDGLRKG DRIRITEGRFKGVEATVVIQPGAGRKDVMVCVENWMWVPLLRVMPGEYEVIALNDEDKHVYTRLDNDCMLNGLHSALQRY HSAEGVNEEDRSLAARALKEYGNLRMDTDVMRCKLYAILLPAYTILGMEEEAAKLVGVMQTMLPLVKAEQSRALAVVTLY GCTDSSIYYHLAHEAVDPWKKEEKPKKSKQQLINRLADYDRWLRH
Sequences:
>Translated_365_residues MKKLSHQFDKPKRSVASPEALEALRNNNAVRWYVLSLPDCHRGGVRGLQREQDRRIQAGEPSFGFFAPSYQEVRRIDGKF VNTQRPLLFNYVFVRASERDVFQLMQRFPVLSFLPRVRERKREYFPYLSDAAMENLQWVARSYSNTLPVYIPQPDGLRKG DRIRITEGRFKGVEATVVIQPGAGRKDVMVCVENWMWVPLLRVMPGEYEVIALNDEDKHVYTRLDNDCMLNGLHSALQRY HSAEGVNEEDRSLAARALKEYGNLRMDTDVMRCKLYAILLPAYTILGMEEEAAKLVGVMQTMLPLVKAEQSRALAVVTLY GCTDSSIYYHLAHEAVDPWKKEEKPKKSKQQLINRLADYDRWLRH >Mature_365_residues MKKLSHQFDKPKRSVASPEALEALRNNNAVRWYVLSLPDCHRGGVRGLQREQDRRIQAGEPSFGFFAPSYQEVRRIDGKF VNTQRPLLFNYVFVRASERDVFQLMQRFPVLSFLPRVRERKREYFPYLSDAAMENLQWVARSYSNTLPVYIPQPDGLRKG DRIRITEGRFKGVEATVVIQPGAGRKDVMVCVENWMWVPLLRVMPGEYEVIALNDEDKHVYTRLDNDCMLNGLHSALQRY HSAEGVNEEDRSLAARALKEYGNLRMDTDVMRCKLYAILLPAYTILGMEEEAAKLVGVMQTMLPLVKAEQSRALAVVTLY GCTDSSIYYHLAHEAVDPWKKEEKPKKSKQQLINRLADYDRWLRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42315; Mature: 42315
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSHQFDKPKRSVASPEALEALRNNNAVRWYVLSLPDCHRGGVRGLQREQDRRIQAGE CCCHHHHCCCCHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCC PSFGFFAPSYQEVRRIDGKFVNTQRPLLFNYVFVRASERDVFQLMQRFPVLSFLPRVRER CCCCCCCCCHHHHHHHCCCEECCCCCCEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHH KREYFPYLSDAAMENLQWVARSYSNTLPVYIPQPDGLRKGDRIRITEGRFKGVEATVVIQ HHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCCCEEEEEEC PGAGRKDVMVCVENWMWVPLLRVMPGEYEVIALNDEDKHVYTRLDNDCMLNGLHSALQRY CCCCCCHHHHHHHHCHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH HSAEGVNEEDRSLAARALKEYGNLRMDTDVMRCKLYAILLPAYTILGMEEEAAKLVGVMQ HHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TMLPLVKAEQSRALAVVTLYGCTDSSIYYHLAHEAVDPWKKEEKPKKSKQQLINRLADYD HHHHHHHHHCCCEEEEEEEECCCCCCCEEEEHHHHCCCHHHCCCCHHHHHHHHHHHHHHH RWLRH HHHCC >Mature Secondary Structure MKKLSHQFDKPKRSVASPEALEALRNNNAVRWYVLSLPDCHRGGVRGLQREQDRRIQAGE CCCHHHHCCCCHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCC PSFGFFAPSYQEVRRIDGKFVNTQRPLLFNYVFVRASERDVFQLMQRFPVLSFLPRVRER CCCCCCCCCHHHHHHHCCCEECCCCCCEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHH KREYFPYLSDAAMENLQWVARSYSNTLPVYIPQPDGLRKGDRIRITEGRFKGVEATVVIQ HHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCCCEEEEEEC PGAGRKDVMVCVENWMWVPLLRVMPGEYEVIALNDEDKHVYTRLDNDCMLNGLHSALQRY CCCCCCHHHHHHHHCHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH HSAEGVNEEDRSLAARALKEYGNLRMDTDVMRCKLYAILLPAYTILGMEEEAAKLVGVMQ HHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TMLPLVKAEQSRALAVVTLYGCTDSSIYYHLAHEAVDPWKKEEKPKKSKQQLINRLADYD HHHHHHHHHCCCEEEEEEEECCCCCCCEEEEHHHHCCCHHHCCCCHHHHHHHHHHHHHHH RWLRH HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA