| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yjbH [C]
Identifier: 150006404
GI number: 150006404
Start: 4833543
End: 4834355
Strand: Reverse
Name: yjbH [C]
Synonym: BVU_3923
Alternate gene names: 150006404
Gene position: 4834355-4833543 (Counterclockwise)
Preceding gene: 150006405
Following gene: 150006402
Centisome position: 93.63
GC content: 44.4
Gene sequence:
>813_bases ATGAAAAGAATCTTATTGCTCGTTTTTTGGTGTAGTGTTTCCTTATGGGCTGATGCCCAGGCATTGCTGGGAACTACCGG ACTGCTTCATGCTCCCACGGCTGATATGCAGCGTGATAAAACTTTTCTATTTGGTGGAAACTATTTGAATACTCATCCGT TATCCACCCATTTTCGTAGCAGTGAAGTGGGGTATACCTTCAATTATTACATTAATATTACTATTTTCCCTTGGCTGGAG GTGTCGTATATCTGTACATTGGTACATGCGGATCATGGCTCTACTTATTTCCCGGAACAGTCTTGGGGAAAATTCACGAA TCAGGACCGGGCTTTCAGTGCGCGTCTGCGCCTTTGGAAAGAAGGGTGGTGGAAGGAGTGGACACCGCAAATAGTCCTTG GTCTGGACGATCCCACCTCTCATGCCGATCATGGTGGTGGGGAATTGGTGTCCGGTAATACAAGCGGTTCCAATAATTAC GCAACACGTTATTATCTGGCTGTAACCAAACATTTGGATGTTCAGAATATAGGTGAATGGGGTATTCATGCCGCATTTGT ATATGGTAATGCCAAAGGTATAGAGCATTATAAACGTCCTTCATTCGGCACAAACTTCCGTTTTCAGTTACTCGGTGACC AGCCTTTGATTAAAGTTGTAAATAATCTTAACCTGATGGCCGAATATGACGCCCGCACAGTGAACATCGGGGCGCACTAC CAGCTTTGGAAAGACCACATCAACCTGATTGCCGAATTGAACAACGGGAAATACTTCTCTGGTGGCATTTACTTCAAAAT CCATCTGAAATGA
Upstream 100 bases:
>100_bases GAATGGTGTTACCGGTTATTGAAAGAACCCCGCCGGATGTGGAAACGTTACATTATCGGCAATCTGTTGTTCATGTGGAA TATATGTAAGGAGTAGCTTG
Downstream 100 bases:
>100_bases TAAAAAAGATTATCCGATTAGGATCTCCGGAATAGATTTTACTCTACAACATTTTGAACATCGGGTGTAAGGGAGATATT GTTGCAAGATTTATCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKRILLLVFWCSVSLWADAQALLGTTGLLHAPTADMQRDKTFLFGGNYLNTHPLSTHFRSSEVGYTFNYYINITIFPWLE VSYICTLVHADHGSTYFPEQSWGKFTNQDRAFSARLRLWKEGWWKEWTPQIVLGLDDPTSHADHGGGELVSGNTSGSNNY ATRYYLAVTKHLDVQNIGEWGIHAAFVYGNAKGIEHYKRPSFGTNFRFQLLGDQPLIKVVNNLNLMAEYDARTVNIGAHY QLWKDHINLIAELNNGKYFSGGIYFKIHLK
Sequences:
>Translated_270_residues MKRILLLVFWCSVSLWADAQALLGTTGLLHAPTADMQRDKTFLFGGNYLNTHPLSTHFRSSEVGYTFNYYINITIFPWLE VSYICTLVHADHGSTYFPEQSWGKFTNQDRAFSARLRLWKEGWWKEWTPQIVLGLDDPTSHADHGGGELVSGNTSGSNNY ATRYYLAVTKHLDVQNIGEWGIHAAFVYGNAKGIEHYKRPSFGTNFRFQLLGDQPLIKVVNNLNLMAEYDARTVNIGAHY QLWKDHINLIAELNNGKYFSGGIYFKIHLK >Mature_270_residues MKRILLLVFWCSVSLWADAQALLGTTGLLHAPTADMQRDKTFLFGGNYLNTHPLSTHFRSSEVGYTFNYYINITIFPWLE VSYICTLVHADHGSTYFPEQSWGKFTNQDRAFSARLRLWKEGWWKEWTPQIVLGLDDPTSHADHGGGELVSGNTSGSNNY ATRYYLAVTKHLDVQNIGEWGIHAAFVYGNAKGIEHYKRPSFGTNFRFQLLGDQPLIKVVNNLNLMAEYDARTVNIGAHY QLWKDHINLIAELNNGKYFSGGIYFKIHLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30845; Mature: 30845
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLLVFWCSVSLWADAQALLGTTGLLHAPTADMQRDKTFLFGGNYLNTHPLSTHFRS CCCEEEEEEECCCHHCCCCHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCC SEVGYTFNYYINITIFPWLEVSYICTLVHADHGSTYFPEQSWGKFTNQDRAFSARLRLWK CCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EGWWKEWTPQIVLGLDDPTSHADHGGGELVSGNTSGSNNYATRYYLAVTKHLDVQNIGEW CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCHHCCCCC GIHAAFVYGNAKGIEHYKRPSFGTNFRFQLLGDQPLIKVVNNLNLMAEYDARTVNIGAHY CEEEEEEEECCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHCCCEEEECCCEEEEECCCH QLWKDHINLIAELNNGKYFSGGIYFKIHLK HHHHHHEEEEEEECCCEEEECEEEEEEEEC >Mature Secondary Structure MKRILLLVFWCSVSLWADAQALLGTTGLLHAPTADMQRDKTFLFGGNYLNTHPLSTHFRS CCCEEEEEEECCCHHCCCCHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCC SEVGYTFNYYINITIFPWLEVSYICTLVHADHGSTYFPEQSWGKFTNQDRAFSARLRLWK CCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EGWWKEWTPQIVLGLDDPTSHADHGGGELVSGNTSGSNNYATRYYLAVTKHLDVQNIGEW CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCHHCCCCC GIHAAFVYGNAKGIEHYKRPSFGTNFRFQLLGDQPLIKVVNNLNLMAEYDARTVNIGAHY CEEEEEEEECCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHCCCEEEECCCEEEEECCCH QLWKDHINLIAELNNGKYFSGGIYFKIHLK HHHHHHEEEEEEECCCEEEECEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA