| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150006388
Identifier: 150006388
GI number: 150006388
Start: 4817691
End: 4818779
Strand: Reverse
Name: 150006388
Synonym: BVU_3907
Alternate gene names: NA
Gene position: 4818779-4817691 (Counterclockwise)
Preceding gene: 150006389
Following gene: 150006387
Centisome position: 93.33
GC content: 41.41
Gene sequence:
>1089_bases ATGATACAGAAAATAACGATTGAAGGATACAAATCAATAAAGGAACAAACTGTAGAGCTGTTTCCCATAAATATATTGAT AGGTGGGAATGGAATAGGAAAGAGCAATTTCATTTCTGCCTTTACTCTTATACATAACCTGTACGAGCGGAATCTTCAGA ATTATGTTCTCACCAAAGGCGGCTCCGACAGTTTGTTGTATATGGGAAAAAAAGAAACTGATCATTTGTCCTTTGACTTG TTTTTTGCGGAACGCGGTAAGGATGCTCATAATCGTTTTATTGTAAATATGAAAGAGGCTCAGGATTCTTTATTTATTGA GCGTATTGATACGGCTTATCACAATGGGGTATCCTGGCACAAACAACTGCACGAGGTCAACAAGCAGGAATCTTCATTTA AGAACGACCATACCGGACAGGCATTTTATGTAAACAGCTTCTTACGCGAATTTGAGGTGTATCATTTCCATGATACGGGA GACCGTTCCCCCATGAAAGGAAAATGTAATATGGATGATAATGTCAGCTTGAAGAACAATGGGGCTAACATTGCCGCATT CTTATATTATCTGAAAGAAAAGCATCCAAAACATTTCACACGTATAGAAAAGGCGGTAGCTTCGGTTTCTCCTTTTTTTG AGGGATTCTGTTTAATGCCCAACCGCTTGAACGAACAGCTGATCCAGCTGGAGTGGAAGCAGAAGGGAGCTGTTGATACG TATTTTAATGCGTACCAGTTATCAGACGGAACGCTGCGTTTTATCTGTCTGGCAACCTTGTTGCTTCAGCCGGATCTGCC AAAGACGGTCATCATTGACGAGCCGGAACTCGGACTACATCCGGTAGCGGTCAACAAACTGGCTGCTTTGATCAAAAAAG CTTCCAGAGAAGCTCAGATAATTATCTCCACTCAATCTGTCAATTTGGTGGATAACTTTGAACCGGAAGATATCATTGTT GTGGATCGTAAAGACAACGCGACTGTTTTCAACCGGCTTGATTCTGAGAATTTAGCGCATTGGCTGGAAGATTACAGCTT GGGAGAAATATGGGAGAAGAATGTCATTGGCGGGCAGCCTTTAAATTGA
Upstream 100 bases:
>100_bases AAAGAAATGAAAAATAAGAGATTTGCAACCGGCAAAATTGTAGTATTCAGGCAAAAAAGCTACTTTTGTATTGTTGTTTG AGAATGTAAACAAAATTTTG
Downstream 100 bases:
>100_bases GTGGGAATGAAAAGAGTAGTGTTTATAGTTGAAGGCGATACGGAAGTGAGTTTTATTCAGAAGCGTGTAATTCCCTATTT GTATTCGAAAGGATTTACTA
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase-Like Protein; SMC Domain-Containing Protein; ATPase; RecF/RecN/SMC N Terminal Domain; RecF Protein; ATPase-Like; Recf Like Family Protein; Endonuclease III
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKGGSDSLLYMGKKETDHLSFDL FFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWHKQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTG DRSPMKGKCNMDDNVSLKNNGANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQIIISTQSVNLVDNFEPEDIIV VDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQPLN
Sequences:
>Translated_362_residues MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKGGSDSLLYMGKKETDHLSFDL FFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWHKQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTG DRSPMKGKCNMDDNVSLKNNGANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQIIISTQSVNLVDNFEPEDIIV VDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQPLN >Mature_362_residues MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKGGSDSLLYMGKKETDHLSFDL FFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWHKQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTG DRSPMKGKCNMDDNVSLKNNGANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQIIISTQSVNLVDNFEPEDIIV VDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQPLN
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41394; Mature: 41394
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKG CCEEEEHHHHHHHHHCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC GSDSLLYMGKKETDHLSFDLFFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWH CCCCEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHH KQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTGDRSPMKGKCNMDDNVSLKNN HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCEEECC GANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCEEECCCHHHHHHHEEHHHCCCCEEH YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQI EECEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE IISTQSVNLVDNFEPEDIIVVDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQP EEEECCEEEECCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCC LN CC >Mature Secondary Structure MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKG CCEEEEHHHHHHHHHCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC GSDSLLYMGKKETDHLSFDLFFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWH CCCCEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHH KQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTGDRSPMKGKCNMDDNVSLKNN HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCEEECC GANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCEEECCCHHHHHHHEEHHHCCCCEEH YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQI EECEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE IISTQSVNLVDNFEPEDIIVVDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQP EEEECCEEEECCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCC LN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA