Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150006388

Identifier: 150006388

GI number: 150006388

Start: 4817691

End: 4818779

Strand: Reverse

Name: 150006388

Synonym: BVU_3907

Alternate gene names: NA

Gene position: 4818779-4817691 (Counterclockwise)

Preceding gene: 150006389

Following gene: 150006387

Centisome position: 93.33

GC content: 41.41

Gene sequence:

>1089_bases
ATGATACAGAAAATAACGATTGAAGGATACAAATCAATAAAGGAACAAACTGTAGAGCTGTTTCCCATAAATATATTGAT
AGGTGGGAATGGAATAGGAAAGAGCAATTTCATTTCTGCCTTTACTCTTATACATAACCTGTACGAGCGGAATCTTCAGA
ATTATGTTCTCACCAAAGGCGGCTCCGACAGTTTGTTGTATATGGGAAAAAAAGAAACTGATCATTTGTCCTTTGACTTG
TTTTTTGCGGAACGCGGTAAGGATGCTCATAATCGTTTTATTGTAAATATGAAAGAGGCTCAGGATTCTTTATTTATTGA
GCGTATTGATACGGCTTATCACAATGGGGTATCCTGGCACAAACAACTGCACGAGGTCAACAAGCAGGAATCTTCATTTA
AGAACGACCATACCGGACAGGCATTTTATGTAAACAGCTTCTTACGCGAATTTGAGGTGTATCATTTCCATGATACGGGA
GACCGTTCCCCCATGAAAGGAAAATGTAATATGGATGATAATGTCAGCTTGAAGAACAATGGGGCTAACATTGCCGCATT
CTTATATTATCTGAAAGAAAAGCATCCAAAACATTTCACACGTATAGAAAAGGCGGTAGCTTCGGTTTCTCCTTTTTTTG
AGGGATTCTGTTTAATGCCCAACCGCTTGAACGAACAGCTGATCCAGCTGGAGTGGAAGCAGAAGGGAGCTGTTGATACG
TATTTTAATGCGTACCAGTTATCAGACGGAACGCTGCGTTTTATCTGTCTGGCAACCTTGTTGCTTCAGCCGGATCTGCC
AAAGACGGTCATCATTGACGAGCCGGAACTCGGACTACATCCGGTAGCGGTCAACAAACTGGCTGCTTTGATCAAAAAAG
CTTCCAGAGAAGCTCAGATAATTATCTCCACTCAATCTGTCAATTTGGTGGATAACTTTGAACCGGAAGATATCATTGTT
GTGGATCGTAAAGACAACGCGACTGTTTTCAACCGGCTTGATTCTGAGAATTTAGCGCATTGGCTGGAAGATTACAGCTT
GGGAGAAATATGGGAGAAGAATGTCATTGGCGGGCAGCCTTTAAATTGA

Upstream 100 bases:

>100_bases
AAAGAAATGAAAAATAAGAGATTTGCAACCGGCAAAATTGTAGTATTCAGGCAAAAAAGCTACTTTTGTATTGTTGTTTG
AGAATGTAAACAAAATTTTG

Downstream 100 bases:

>100_bases
GTGGGAATGAAAAGAGTAGTGTTTATAGTTGAAGGCGATACGGAAGTGAGTTTTATTCAGAAGCGTGTAATTCCCTATTT
GTATTCGAAAGGATTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase-Like Protein; SMC Domain-Containing Protein; ATPase; RecF/RecN/SMC N Terminal Domain; RecF Protein; ATPase-Like; Recf Like Family Protein; Endonuclease III

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKGGSDSLLYMGKKETDHLSFDL
FFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWHKQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTG
DRSPMKGKCNMDDNVSLKNNGANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT
YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQIIISTQSVNLVDNFEPEDIIV
VDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQPLN

Sequences:

>Translated_362_residues
MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKGGSDSLLYMGKKETDHLSFDL
FFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWHKQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTG
DRSPMKGKCNMDDNVSLKNNGANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT
YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQIIISTQSVNLVDNFEPEDIIV
VDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQPLN
>Mature_362_residues
MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKGGSDSLLYMGKKETDHLSFDL
FFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWHKQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTG
DRSPMKGKCNMDDNVSLKNNGANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT
YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQIIISTQSVNLVDNFEPEDIIV
VDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQPLN

Specific function: Unknown

COG id: COG4637

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41394; Mature: 41394

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKG
CCEEEEHHHHHHHHHCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC
GSDSLLYMGKKETDHLSFDLFFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWH
CCCCEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHH
KQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTGDRSPMKGKCNMDDNVSLKNN
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCEEECC
GANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCEEECCCHHHHHHHEEHHHCCCCEEH
YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQI
EECEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
IISTQSVNLVDNFEPEDIIVVDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQP
EEEECCEEEECCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCC
LN
CC
>Mature Secondary Structure
MIQKITIEGYKSIKEQTVELFPINILIGGNGIGKSNFISAFTLIHNLYERNLQNYVLTKG
CCEEEEHHHHHHHHHCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC
GSDSLLYMGKKETDHLSFDLFFAERGKDAHNRFIVNMKEAQDSLFIERIDTAYHNGVSWH
CCCCEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHH
KQLHEVNKQESSFKNDHTGQAFYVNSFLREFEVYHFHDTGDRSPMKGKCNMDDNVSLKNN
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCEEECC
GANIAAFLYYLKEKHPKHFTRIEKAVASVSPFFEGFCLMPNRLNEQLIQLEWKQKGAVDT
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCEEECCCHHHHHHHEEHHHCCCCEEH
YFNAYQLSDGTLRFICLATLLLQPDLPKTVIIDEPELGLHPVAVNKLAALIKKASREAQI
EECEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
IISTQSVNLVDNFEPEDIIVVDRKDNATVFNRLDSENLAHWLEDYSLGEIWEKNVIGGQP
EEEECCEEEECCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCC
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA