| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is yycG [H]
Identifier: 150006384
GI number: 150006384
Start: 4813005
End: 4813646
Strand: Direct
Name: yycG [H]
Synonym: BVU_3903
Alternate gene names: 150006384
Gene position: 4813005-4813646 (Clockwise)
Preceding gene: 150006383
Following gene: 150006393
Centisome position: 93.22
GC content: 46.42
Gene sequence:
>642_bases ATGAGCCATGAAATCCGTACTCCGCTTAATGCCATCGTGGGATTCTCCAACCTGCTCACTACCGAGAAAAACATCTCGGA AGAAGAGAAAAAAGAGTTTGCCTCCATCATAGACAACAATACCAGACTCTTGTTGAAGCTGGTCAATGATGTGCTGGAAC TATCCCGTATAGAATCCGGCAATATGTCCTTTCATTGCGAGGATTGCAGCGCGCATCATTTCGCCGAAACGGTCTATCAG ACCCATCAGGTAATTATTCTCCCTCCAGTGGAATTCATCAAAGAATTTCCCGACGAGGATGTGACCATACACATAGACCG TATGCGCCTCACCCAAGTCATCACCAACTTTTTGGGAAACGCCAAGAAGTTCACCTCCCAAGGACACATCAAACTGGGTT ATTTCTGCGACAAAGAGAAAAAGGAAATCCATATCTTCGTAGAAGATACCGGTGCGGGAATCCCTAAAGAAGAATTACAA ATGATATTCGAGCGGTTCTACAAGCGGAATGAGTTTGTACAGGGTGTAGGGCTGGGACTCGCCATCAGCAAGGTCATTGT AGAAAAAATGAACGGACACATCGATGTGCAATCCGAGGTGAACAAGGGCAGCCGTTTCACCGCCGTACTGCCCTATCTGT AA
Upstream 100 bases:
>100_bases TCTGGTAAACATTCAGGAGATCAAAGACAAGGAAGAAGAACTGATACGCGCCCGCAAACTGGCGGAACAGGCGGAACTGA AACAATCCTTCCTGGCCAAC
Downstream 100 bases:
>100_bases TTTTATTCCTGTGCAGGCTGTTTAGGCAGGGCGAACTGCAAGACCAGATACGCCAGCACACCCGCCAGCACCGTTCCCAG TATGACACCCATCTTTGCCT
Product: putative two-component regulator sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSHEIRTPLNAIVGFSNLLTTEKNISEEEKKEFASIIDNNTRLLLKLVNDVLELSRIESGNMSFHCEDCSAHHFAETVYQ THQVIILPPVEFIKEFPDEDVTIHIDRMRLTQVITNFLGNAKKFTSQGHIKLGYFCDKEKKEIHIFVEDTGAGIPKEELQ MIFERFYKRNEFVQGVGLGLAISKVIVEKMNGHIDVQSEVNKGSRFTAVLPYL
Sequences:
>Translated_213_residues MSHEIRTPLNAIVGFSNLLTTEKNISEEEKKEFASIIDNNTRLLLKLVNDVLELSRIESGNMSFHCEDCSAHHFAETVYQ THQVIILPPVEFIKEFPDEDVTIHIDRMRLTQVITNFLGNAKKFTSQGHIKLGYFCDKEKKEIHIFVEDTGAGIPKEELQ MIFERFYKRNEFVQGVGLGLAISKVIVEKMNGHIDVQSEVNKGSRFTAVLPYL >Mature_212_residues SHEIRTPLNAIVGFSNLLTTEKNISEEEKKEFASIIDNNTRLLLKLVNDVLELSRIESGNMSFHCEDCSAHHFAETVYQT HQVIILPPVEFIKEFPDEDVTIHIDRMRLTQVITNFLGNAKKFTSQGHIKLGYFCDKEKKEIHIFVEDTGAGIPKEELQM IFERFYKRNEFVQGVGLGLAISKVIVEKMNGHIDVQSEVNKGSRFTAVLPYL
Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=217, Percent_Identity=35.4838709677419, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1789149, Length=218, Percent_Identity=31.1926605504587, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1788713, Length=220, Percent_Identity=31.8181818181818, Blast_Score=106, Evalue=9e-25, Organism=Escherichia coli, GI48994928, Length=217, Percent_Identity=32.7188940092166, Blast_Score=106, Evalue=9e-25, Organism=Escherichia coli, GI87081816, Length=215, Percent_Identity=33.953488372093, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786912, Length=217, Percent_Identity=29.4930875576037, Blast_Score=91, Evalue=4e-20, Organism=Escherichia coli, GI1788549, Length=213, Percent_Identity=29.5774647887324, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1790436, Length=215, Percent_Identity=29.7674418604651, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1786600, Length=216, Percent_Identity=28.7037037037037, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788393, Length=231, Percent_Identity=29.8701298701299, Blast_Score=77, Evalue=6e-16, Organism=Escherichia coli, GI87082128, Length=222, Percent_Identity=28.3783783783784, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1786783, Length=222, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI1790346, Length=220, Percent_Identity=26.3636363636364, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 24354; Mature: 24223
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHEIRTPLNAIVGFSNLLTTEKNISEEEKKEFASIIDNNTRLLLKLVNDVLELSRIESG CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC NMSFHCEDCSAHHFAETVYQTHQVIILPPVEFIKEFPDEDVTIHIDRMRLTQVITNFLGN CCEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCC AKKFTSQGHIKLGYFCDKEKKEIHIFVEDTGAGIPKEELQMIFERFYKRNEFVQGVGLGL HHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AISKVIVEKMNGHIDVQSEVNKGSRFTAVLPYL HHHHHHHHHHCCCEEEHHHCCCCCEEEEECCCC >Mature Secondary Structure SHEIRTPLNAIVGFSNLLTTEKNISEEEKKEFASIIDNNTRLLLKLVNDVLELSRIESG CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC NMSFHCEDCSAHHFAETVYQTHQVIILPPVEFIKEFPDEDVTIHIDRMRLTQVITNFLGN CCEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCC AKKFTSQGHIKLGYFCDKEKKEIHIFVEDTGAGIPKEELQMIFERFYKRNEFVQGVGLGL HHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AISKVIVEKMNGHIDVQSEVNKGSRFTAVLPYL HHHHHHHHHHCCCEEEHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 9829949; 10878122; 11758928 [H]