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The map label for this gene is rnfE [H]

Identifier: 150006367

GI number: 150006367

Start: 4791378

End: 4791962

Strand: Reverse

Name: rnfE [H]

Synonym: BVU_3886

Alternate gene names: 150006367

Gene position: 4791962-4791378 (Counterclockwise)

Preceding gene: 150006368

Following gene: 150006366

Centisome position: 92.81

GC content: 42.22

Gene sequence:

>585_bases
ATGAATAATTTTAAAGTATTAATGAACGGGATTGTCAAAGAGAATCCTACGTTTGTACTCCTTTTGGGTATGTGTCCTAC
ATTGGGAACCACTTCTTCTGCCATCAATGGTATGGGTATGGGACTGGCAACCATGTTTGTGTTGATTTGTTCGAATGTGG
TAATTTCATCTATCAAGAATCTGATTCCTGATATGGTGCGTATTCCTGCATTCATTGTGGTTATTGCATCATTTGTAACC
TTGTTGCAGATGATTATGCAGGCATATGTGCCGGCGCTGTATGCTACTTTGGGATTGTTTATTCCGTTGATTGTGGTAAA
CTGTATCTTGCTGGGACGCGCCGAAGCGTTTGCCGCAAAGAACGGTCCTGTTCCTTCATTCTTTGACGGATTGGGTATGG
GACTAGGATTTACACTTGCATTGACCATCCTTGGTGGTGTACGTGAGTTCCTTGGTACAGGTAAATTGTTTGATATCGCT
ATTATGCCGGAGCAATACGGAATGTTGATTTTCGTTCTCGCACCGGGAGCCTTCATTGCATTGGGTTACCTCATTGCGAT
TGTGAATAAACTGAAGAAAGCATAA

Upstream 100 bases:

>100_bases
GTGGTAAATGTGATCCTGCTAACTGCGACAAGGCGGACTGTAAAAAAGCAGAATGCCCAAAGCAAGATTGTAAAAACAAA
AAATAAGGAAGGAGCAGACT

Downstream 100 bases:

>100_bases
CCCGTAAAAAGTAAGAAAATGGAATATATATTGATATTTATCACCGCTATATTTGTGAACAACATTGTGTTGTCACAATT
CTTGGGTATTTGTCCATTCC

Product: electron transport complex RsxE subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNNFKVLMNGIVKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKNLIPDMVRIPAFIVVIASFVT
LLQMIMQAYVPALYATLGLFIPLIVVNCILLGRAEAFAAKNGPVPSFFDGLGMGLGFTLALTILGGVREFLGTGKLFDIA
IMPEQYGMLIFVLAPGAFIALGYLIAIVNKLKKA

Sequences:

>Translated_194_residues
MNNFKVLMNGIVKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKNLIPDMVRIPAFIVVIASFVT
LLQMIMQAYVPALYATLGLFIPLIVVNCILLGRAEAFAAKNGPVPSFFDGLGMGLGFTLALTILGGVREFLGTGKLFDIA
IMPEQYGMLIFVLAPGAFIALGYLIAIVNKLKKA
>Mature_194_residues
MNNFKVLMNGIVKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKNLIPDMVRIPAFIVVIASFVT
LLQMIMQAYVPALYATLGLFIPLIVVNCILLGRAEAFAAKNGPVPSFFDGLGMGLGFTLALTILGGVREFLGTGKLFDIA
IMPEQYGMLIFVLAPGAFIALGYLIAIVNKLKKA

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4660

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family [H]

Homologues:

Organism=Escherichia coli, GI1787919, Length=207, Percent_Identity=43.9613526570048, Blast_Score=153, Evalue=9e-39,
Organism=Escherichia coli, GI1787914, Length=165, Percent_Identity=35.7575757575758, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003667
- InterPro:   IPR010968 [H]

Pfam domain/function: PF02508 Rnf-Nqr [H]

EC number: NA

Molecular weight: Translated: 20626; Mature: 20626

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFKVLMNGIVKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKN
CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LIPDMVRIPAFIVVIASFVTLLQMIMQAYVPALYATLGLFIPLIVVNCILLGRAEAFAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NGPVPSFFDGLGMGLGFTLALTILGGVREFLGTGKLFDIAIMPEQYGMLIFVLAPGAFIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCHHHHH
LGYLIAIVNKLKKA
HHHHHHHHHHHHCC
>Mature Secondary Structure
MNNFKVLMNGIVKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKN
CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LIPDMVRIPAFIVVIASFVTLLQMIMQAYVPALYATLGLFIPLIVVNCILLGRAEAFAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NGPVPSFFDGLGMGLGFTLALTILGGVREFLGTGKLFDIAIMPEQYGMLIFVLAPGAFIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCHHHHH
LGYLIAIVNKLKKA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA