| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is ptpA [H]
Identifier: 150006357
GI number: 150006357
Start: 4779203
End: 4781434
Strand: Direct
Name: ptpA [H]
Synonym: BVU_3876
Alternate gene names: 150006357
Gene position: 4779203-4781434 (Clockwise)
Preceding gene: 150006356
Following gene: 150006358
Centisome position: 92.56
GC content: 46.55
Gene sequence:
>2232_bases ATGACGAAAAAGAACTTATTTACATTAGTCTTATGCTTATTCTGTTTCGGAACCACAACTCATGCGCAACGTATCCCCAC ATTGGAGGAGGCCGTATACGGAGGACTGATCAAGACAGAAGGCGGAAGTAACGTGAACTGGATGAAAGATGGAGAACGTT ATTCCAAAATAGAGAAAAATGCCGAGGGAGCATACGAAGTCACTGCCTACAAAGCAAAGGACAATTCCAAAGAAGTGCTG ATCCCTGCCAATATGCTTTTGAATCCGCAAACAGGAAAACCTATCTCTGTCCGCAATTTCGTATTCAGCGAGGATAACTC CAAAGTATTGATCTATACCAATACCCGTCGCGTATGGCGTTATGATACCCGCGGTGATTACTGGGTGCTTAATTTGAAAG ACGGCAAACTGCAACAATTGGGCAAAAGCTTGCCGGAAGCTACCTTGATGTTCGCCAAGTTCTCGCCGGATGCCAGCCGG GTAGCATATGTCTCCAGAAACAACATTTATGTAGAGAGTCTGGTTGACGGGAAAATCAACCAACTAACTCAAGACGGAAA TAATGAAATTGTAAACGGAACATTCGACTGGGTATACGAAGAAGAATTCAACTGCCGCGACGGTTTCCGCTGGAGTCCCG ACGGGCAATACATAGCCTATTGGCAAAGCGATACCCAAGGTACGGGATGGTTTGATATCATCAATAATGTAGATTCCATT TATCCTAAAATCCAACGTTTTCCCTACCCTAAAGCCGGAACAGCAAACTCCGCTGTAAAAGTAGGCTATGTATCAGCCGA CGGTGGAAACACCACTTGGCTGGCTCTTCCAGGTGATGCACGCAACCACTATATTCCACGTATGGAATTCATTCCGGGCT GCAACGAACTGTTCATCCAGCAAATGAACCGTGCCCAAAACACCAATAAAGTATGGATTGCGAAAATAGGTGAAAATACC CCCGTCAATATCTTTACCGATCAAGATGCCGCATGGTTGGAAACGAATGACAATGTGCGTTGGTTGAAAGGGAACAAGTA TTTCACTTGGGAAAGCGAACGTGACGGATGGCGCCACCTGTATCGTGTAAGCCGTGATGGTAAAGAAATCAAGCCCATCA CCCAAGGAGCTTTTGATTATATTCAAGAAGTAGGTGCGGATATGGATAAAGGTTTTGTGTACTTTATCGCCTCTCCCGAC AACTTCACCCAGCGCTATCTCTACCGGGCACGTCTTTTCGGCAATGGAGAGGTAAAGCGGCTAAGTCCTGTTGACCAAAG CGGGCAACATCGTTATATCATGTCACCGTCCGGCAAATGGGCAGTCCATACATTCAGTAACTCGGAAACTCCCCCTGTAA TCGACATGGTGTCTTTCCCTGCCCATAAAAGTATACGTCTGATTACTGACAATGCAAAAGCCAAGGAGCAATACAAAGCC TTGGGGCTGCAACCGAAAGAATTTGTAAAAACCCGTTCAGGAGAACTGGAACTGGATGCATGGATGATCAAACCCGTAAA CTTTGATCCCAGCAAAAAATATCCGGTCATAATTGATGTCTATGGAGAACCTGCCAACGCCACCGTGCAGGATGTATGGA GCGGAGGAAGTTTATGGCACCAGTACTTGGCAAACCTGGGGTATATCATAGTCAGCATCGAGAACCGTGGTGCCAATGCA CCCCGTGGACGCGAATGGCGCAAATGTATTTATGGAGAAGTCGGAACCTTTGCCAGTGAAGATCAGGCAAGAGGCATCCA AGACTTGGCACGTCAATACTCTTTCATTGACACCGCACGTATCGGTATCACCGGCTGGAGTGGCGGAGGCAGCCAGACGC TGAACAGTATGTTCCGTTATCCCGATGTTTTCCACACAGGTATTGCCATTGCTTTTGTGGCCGACCAGCGTCTGTATGAC ACGGTTTATCAAGAACGTTATATGAATACTCCTCAAAATAATCCGGAGGGTTACCGCAAAGGGTCTCCCATCTCGTATGC AGCAGGATTGAAAGGCAACTTGCTGTTAATTCACGGTACAGGAGATGACAATGTCCATTATCAGAATTGTGAAATGTTGG TCAATGAACTGGTACGGCACGGAAAAATCTTCTCACAGATTTCTTACCCGATGCGTTCCCATGGAATTTACGAAGGCGAG GGAACCAGCTTGCATCTGCGAAAGACAATGGCTGATTACTGGCTGAAAAACCTGCCTGCCGGAGGAAAATAA
Upstream 100 bases:
>100_bases AAATAGACGCCCGTTTTTTGAAAACAGATATCCGGAATCCCAATACATACTTGTGTTTTCAAATGGACATCTATTTTTTA GTAAAAGATTCATAATAACT
Downstream 100 bases:
>100_bases ATATGCCAAAATTCCTGCTGATATGATTATACAGTCGGCCATTCTGAACATTAGTGAAACTTTTCATATACATAAAATGA TTAGAGTCCAAATTTTTCAC
Product: dipeptidyl aminopeptidase
Products: NA
Alternate protein names: PTP; Prolyl tripeptidyl peptidase A [H]
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MTKKNLFTLVLCLFCFGTTTHAQRIPTLEEAVYGGLIKTEGGSNVNWMKDGERYSKIEKNAEGAYEVTAYKAKDNSKEVL IPANMLLNPQTGKPISVRNFVFSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKDGKLQQLGKSLPEATLMFAKFSPDASR VAYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSI YPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENT PVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYFIASPD NFTQRYLYRARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSIRLITDNAKAKEQYKA LGLQPKEFVKTRSGELELDAWMIKPVNFDPSKKYPVIIDVYGEPANATVQDVWSGGSLWHQYLANLGYIIVSIENRGANA PRGREWRKCIYGEVGTFASEDQARGIQDLARQYSFIDTARIGITGWSGGGSQTLNSMFRYPDVFHTGIAIAFVADQRLYD TVYQERYMNTPQNNPEGYRKGSPISYAAGLKGNLLLIHGTGDDNVHYQNCEMLVNELVRHGKIFSQISYPMRSHGIYEGE GTSLHLRKTMADYWLKNLPAGGK
Sequences:
>Translated_743_residues MTKKNLFTLVLCLFCFGTTTHAQRIPTLEEAVYGGLIKTEGGSNVNWMKDGERYSKIEKNAEGAYEVTAYKAKDNSKEVL IPANMLLNPQTGKPISVRNFVFSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKDGKLQQLGKSLPEATLMFAKFSPDASR VAYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSI YPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENT PVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYFIASPD NFTQRYLYRARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSIRLITDNAKAKEQYKA LGLQPKEFVKTRSGELELDAWMIKPVNFDPSKKYPVIIDVYGEPANATVQDVWSGGSLWHQYLANLGYIIVSIENRGANA PRGREWRKCIYGEVGTFASEDQARGIQDLARQYSFIDTARIGITGWSGGGSQTLNSMFRYPDVFHTGIAIAFVADQRLYD TVYQERYMNTPQNNPEGYRKGSPISYAAGLKGNLLLIHGTGDDNVHYQNCEMLVNELVRHGKIFSQISYPMRSHGIYEGE GTSLHLRKTMADYWLKNLPAGGK >Mature_742_residues TKKNLFTLVLCLFCFGTTTHAQRIPTLEEAVYGGLIKTEGGSNVNWMKDGERYSKIEKNAEGAYEVTAYKAKDNSKEVLI PANMLLNPQTGKPISVRNFVFSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKDGKLQQLGKSLPEATLMFAKFSPDASRV AYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIY PKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTP VNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYFIASPDN FTQRYLYRARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSIRLITDNAKAKEQYKAL GLQPKEFVKTRSGELELDAWMIKPVNFDPSKKYPVIIDVYGEPANATVQDVWSGGSLWHQYLANLGYIIVSIENRGANAP RGREWRKCIYGEVGTFASEDQARGIQDLARQYSFIDTARIGITGWSGGGSQTLNSMFRYPDVFHTGIAIAFVADQRLYDT VYQERYMNTPQNNPEGYRKGSPISYAAGLKGNLLLIHGTGDDNVHYQNCEMLVNELVRHGKIFSQISYPMRSHGIYEGEG TSLHLRKTMADYWLKNLPAGGK
Specific function: Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position [H]
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI18765694, Length=706, Percent_Identity=29.4617563739377, Blast_Score=216, Evalue=7e-56, Organism=Homo sapiens, GI16933540, Length=684, Percent_Identity=27.3391812865497, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI18450280, Length=710, Percent_Identity=26.4788732394366, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI37577089, Length=710, Percent_Identity=26.4788732394366, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI85787627, Length=674, Percent_Identity=23.8872403560831, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI295842403, Length=674, Percent_Identity=23.8872403560831, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI52426756, Length=674, Percent_Identity=23.8872403560831, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI295842359, Length=674, Percent_Identity=23.8872403560831, Blast_Score=187, Evalue=4e-47, Organism=Homo sapiens, GI295849272, Length=674, Percent_Identity=23.8872403560831, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI86792774, Length=718, Percent_Identity=22.4233983286908, Blast_Score=167, Evalue=4e-41, Organism=Homo sapiens, GI86792863, Length=718, Percent_Identity=22.4233983286908, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI86792778, Length=718, Percent_Identity=22.4233983286908, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI194394146, Length=366, Percent_Identity=31.9672131147541, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI37577091, Length=710, Percent_Identity=23.6619718309859, Blast_Score=131, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17508019, Length=236, Percent_Identity=38.135593220339, Blast_Score=151, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17508017, Length=236, Percent_Identity=38.135593220339, Blast_Score=151, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17550672, Length=656, Percent_Identity=25.7621951219512, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17564632, Length=630, Percent_Identity=24.2857142857143, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17564634, Length=621, Percent_Identity=24.3156199677939, Blast_Score=123, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6321817, Length=731, Percent_Identity=26.9493844049248, Blast_Score=236, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6324793, Length=725, Percent_Identity=25.1034482758621, Blast_Score=177, Evalue=5e-45, Organism=Drosophila melanogaster, GI45550825, Length=707, Percent_Identity=24.1867043847242, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI45553511, Length=707, Percent_Identity=24.1867043847242, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI45551969, Length=707, Percent_Identity=24.6110325318246, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI17933704, Length=653, Percent_Identity=27.718223583461, Blast_Score=180, Evalue=4e-45, Organism=Drosophila melanogaster, GI161083744, Length=653, Percent_Identity=27.718223583461, Blast_Score=179, Evalue=8e-45, Organism=Drosophila melanogaster, GI221331178, Length=653, Percent_Identity=27.718223583461, Blast_Score=179, Evalue=9e-45, Organism=Drosophila melanogaster, GI24582032, Length=662, Percent_Identity=26.1329305135952, Blast_Score=169, Evalue=8e-42, Organism=Drosophila melanogaster, GI24582257, Length=275, Percent_Identity=30.5454545454545, Blast_Score=125, Evalue=2e-28, Organism=Drosophila melanogaster, GI221372266, Length=442, Percent_Identity=25.1131221719457, Blast_Score=96, Evalue=1e-19, Organism=Drosophila melanogaster, GI221372263, Length=442, Percent_Identity=25.1131221719457, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI45551475, Length=442, Percent_Identity=25.1131221719457, Blast_Score=95, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 - InterPro: IPR002469 [H]
Pfam domain/function: PF00930 DPPIV_N; PF00326 Peptidase_S9 [H]
EC number: =3.4.14.12 [H]
Molecular weight: Translated: 84406; Mature: 84275
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKNLFTLVLCLFCFGTTTHAQRIPTLEEAVYGGLIKTEGGSNVNWMKDGERYSKIEKN CCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHC AEGAYEVTAYKAKDNSKEVLIPANMLLNPQTGKPISVRNFVFSEDNSKVLIYTNTRRVWR CCCCEEEEEEECCCCCCEEEEECCEEECCCCCCCEEEEEEEEECCCCEEEEEECCCEEEE YDTRGDYWVLNLKDGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESLVDGKIN ECCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCHHH QLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSI HHHCCCCCCEECCEEEEEEECCCCCCCCCEECCCCCEEEEECCCCCCCCHHHHHHHHHHH YPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQ HHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHCCCCHHHHHHH QMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHL HHHHCCCCCEEEEEEECCCCCEEEEECCCCEEEECCCCEEEEECCEEEEECCCCCHHHHH YRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYFIASPDNFTQRYLYRARLFGNGEVKR HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHEEECCCCEEE LSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSIRLITDNAKAKEQYKA ECCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHH LGLQPKEFVKTRSGELELDAWMIKPVNFDPSKKYPVIIDVYGEPANATVQDVWSGGSLWH CCCCHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHHH QYLANLGYIIVSIENRGANAPRGREWRKCIYGEVGTFASEDQARGIQDLARQYSFIDTAR HHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHEEEE IGITGWSGGGSQTLNSMFRYPDVFHTGIAIAFVADQRLYDTVYQERYMNTPQNNPEGYRK EEEEECCCCCHHHHHHHHCCCCHHHCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCC GSPISYAAGLKGNLLLIHGTGDDNVHYQNCEMLVNELVRHGKIFSQISYPMRSHGIYEGE CCCCEEECCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCCHHHHHHCCCHHHCCEECCC GTSLHLRKTMADYWLKNLPAGGK CCEEEHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKKNLFTLVLCLFCFGTTTHAQRIPTLEEAVYGGLIKTEGGSNVNWMKDGERYSKIEKN CCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHC AEGAYEVTAYKAKDNSKEVLIPANMLLNPQTGKPISVRNFVFSEDNSKVLIYTNTRRVWR CCCCEEEEEEECCCCCCEEEEECCEEECCCCCCCEEEEEEEEECCCCEEEEEECCCEEEE YDTRGDYWVLNLKDGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESLVDGKIN ECCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCHHH QLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSI HHHCCCCCCEECCEEEEEEECCCCCCCCCEECCCCCEEEEECCCCCCCCHHHHHHHHHHH YPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQ HHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHCCCCHHHHHHH QMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHL HHHHCCCCCEEEEEEECCCCCEEEEECCCCEEEECCCCEEEEECCEEEEECCCCCHHHHH YRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYFIASPDNFTQRYLYRARLFGNGEVKR HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHEEECCCCEEE LSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSIRLITDNAKAKEQYKA ECCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHH LGLQPKEFVKTRSGELELDAWMIKPVNFDPSKKYPVIIDVYGEPANATVQDVWSGGSLWH CCCCHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHHH QYLANLGYIIVSIENRGANAPRGREWRKCIYGEVGTFASEDQARGIQDLARQYSFIDTAR HHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHEEEE IGITGWSGGGSQTLNSMFRYPDVFHTGIAIAFVADQRLYDTVYQERYMNTPQNNPEGYRK EEEEECCCCCHHHHHHHHCCCCHHHCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCC GSPISYAAGLKGNLLLIHGTGDDNVHYQNCEMLVNELVRHGKIFSQISYPMRSHGIYEGE CCCCEEECCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCCHHHHHHCCCHHHCCEECCC GTSLHLRKTMADYWLKNLPAGGK CCEEEHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA