| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006356
Identifier: 150006356
GI number: 150006356
Start: 4777882
End: 4779072
Strand: Direct
Name: 150006356
Synonym: BVU_3875
Alternate gene names: NA
Gene position: 4777882-4779072 (Clockwise)
Preceding gene: 150006355
Following gene: 150006357
Centisome position: 92.54
GC content: 42.91
Gene sequence:
>1191_bases ATGAAGACAAAAGTATTCACACTAGCCGCACTGCTATGCTGTGCATCAGCCATGTATGCACAAGAAAGTGGTTACAAATT CACGACTGTTGCATCACAGAAAGCAACTCCAGTCAAAAATCAGGCCTCTACCGGAACTTGCTGGTGCTTTGCCACCACTT CGTTCATGGAATCCGAACTGCTCCGTATGGGCAAAGGGGAATATGATCTTTCTGAAATGTTCATTGTACGCCAAAAGTAC TTGAACCAATTGGAAGACAACTATTACCGGGGAGGCAACGGGAATTTAGGACAAGGAAGCCTTTCACACACATGGAAGAA TGCTTTCAACCAAGTGGGTATCGTACCCGAGGAAGTATATCACGGAATCAACTATAACTCAGAAAAACATAACCACGGTG AAATGGTGAGATATATCAACGCTTTAGGAAACACAGCCGTTAAGATGAAACGTCGCAGCCCGGAATACTACAAGCTGATC AACAACCTTTTCGATACTTATCTAGGAGAACTTCCTGAAAAGTTCACTTACAAAGGAAAAGAGTACACTCCGAAATCTTT TGCCGAAAGTCTGGGTTTGAACATGGACGATTATATCGAACTGACTAGTTTCACTCACAAACCGTATTACCAGAAATTCT CTCCGGAAGTACCCGACAATTGGGAAAATGAACAAATGTACAATCTTCCGCTGGACGAAATGATGGAAGTTGCCGACTAT GCTTTGACCCACGGATATACCGTATGTTGGGACGGTGATGTCAGTGAAAAAGGTTTTTCATTCAAAAATGGTGTAGCCAT CAATCCGGTAGTGAAAAAAGCGGAAGATCTCTCGGGTTCCGACCGTGCACGTTTTGAGAAAATGGACCCTAAAGAACAAA GAGAGATGCTGGCGGAAGCCTACAAATTTGAAAAACCGTGTCCCGAAGTAAATGTCACTCCGGAAGTCCGTCAGGAAGGT TATGAAGCATTTGTCACTACAGATGACCACCTGATGCATCTTACCGGTATTACCAAAGACCAGAACGGGACCAAATACTA TATCACCAAAAATTCTTGGGGTACAGAACGCAATACATTTGGCGGTTATCTGAATATGTCCGAAAGCTATGTACGTGCCA AGACTATTTTCCTCATGGTGCATAAAGATGCTATTCCGGCTGCAATCAAACAGAAATTAGGAATTAAATAA
Upstream 100 bases:
>100_bases GGCGCCACCATCCTTCGCTGGGACGAAATGGCAAACCAATATTGGATTGAGTCACGCTTCGGCTTTTAATTGTTAACCTT ATCATATTAAAAACAAACTT
Downstream 100 bases:
>100_bases AAAAGAAAAGAGCAGGCGTCCGTTTTTCTAAAATAGACGCCCGTTTTTTGAAAACAGATATCCGGAATCCCAATACATAC TTGTGTTTTCAAATGGACAT
Product: aminopeptidase C
Products: NA
Alternate protein names: Aminopeptidase C; Peptidase C1B Bleomycin Hydrolase; Peptidase C1b Bleomycin Hydrolase; Peptidase C1a Papain; C1 Family Peptidase; Bleomycin Hydrolase
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKTKVFTLAALLCCASAMYAQESGYKFTTVASQKATPVKNQASTGTCWCFATTSFMESELLRMGKGEYDLSEMFIVRQKY LNQLEDNYYRGGNGNLGQGSLSHTWKNAFNQVGIVPEEVYHGINYNSEKHNHGEMVRYINALGNTAVKMKRRSPEYYKLI NNLFDTYLGELPEKFTYKGKEYTPKSFAESLGLNMDDYIELTSFTHKPYYQKFSPEVPDNWENEQMYNLPLDEMMEVADY ALTHGYTVCWDGDVSEKGFSFKNGVAINPVVKKAEDLSGSDRARFEKMDPKEQREMLAEAYKFEKPCPEVNVTPEVRQEG YEAFVTTDDHLMHLTGITKDQNGTKYYITKNSWGTERNTFGGYLNMSESYVRAKTIFLMVHKDAIPAAIKQKLGIK
Sequences:
>Translated_396_residues MKTKVFTLAALLCCASAMYAQESGYKFTTVASQKATPVKNQASTGTCWCFATTSFMESELLRMGKGEYDLSEMFIVRQKY LNQLEDNYYRGGNGNLGQGSLSHTWKNAFNQVGIVPEEVYHGINYNSEKHNHGEMVRYINALGNTAVKMKRRSPEYYKLI NNLFDTYLGELPEKFTYKGKEYTPKSFAESLGLNMDDYIELTSFTHKPYYQKFSPEVPDNWENEQMYNLPLDEMMEVADY ALTHGYTVCWDGDVSEKGFSFKNGVAINPVVKKAEDLSGSDRARFEKMDPKEQREMLAEAYKFEKPCPEVNVTPEVRQEG YEAFVTTDDHLMHLTGITKDQNGTKYYITKNSWGTERNTFGGYLNMSESYVRAKTIFLMVHKDAIPAAIKQKLGIK >Mature_396_residues MKTKVFTLAALLCCASAMYAQESGYKFTTVASQKATPVKNQASTGTCWCFATTSFMESELLRMGKGEYDLSEMFIVRQKY LNQLEDNYYRGGNGNLGQGSLSHTWKNAFNQVGIVPEEVYHGINYNSEKHNHGEMVRYINALGNTAVKMKRRSPEYYKLI NNLFDTYLGELPEKFTYKGKEYTPKSFAESLGLNMDDYIELTSFTHKPYYQKFSPEVPDNWENEQMYNLPLDEMMEVADY ALTHGYTVCWDGDVSEKGFSFKNGVAINPVVKKAEDLSGSDRARFEKMDPKEQREMLAEAYKFEKPCPEVNVTPEVRQEG YEAFVTTDDHLMHLTGITKDQNGTKYYITKNSWGTERNTFGGYLNMSESYVRAKTIFLMVHKDAIPAAIKQKLGIK
Specific function: Unknown
COG id: COG4870
COG function: function code O; Cysteine protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45289; Mature: 45289
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00139 THIOL_PROTEASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKVFTLAALLCCASAMYAQESGYKFTTVASQKATPVKNQASTGTCWCFATTSFMESEL CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHH LRMGKGEYDLSEMFIVRQKYLNQLEDNYYRGGNGNLGQGSLSHTWKNAFNQVGIVPEEVY HHHCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHH HGINYNSEKHNHGEMVRYINALGNTAVKMKRRSPEYYKLINNLFDTYLGELPEKFTYKGK CCCCCCCCCCCHHHHHHHHHHHCCHHEEHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCC EYTPKSFAESLGLNMDDYIELTSFTHKPYYQKFSPEVPDNWENEQMYNLPLDEMMEVADY CCCHHHHHHHHCCCHHHHEEHHHCCCCCHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHH ALTHGYTVCWDGDVSEKGFSFKNGVAINPVVKKAEDLSGSDRARFEKMDPKEQREMLAEA HHHCCEEEEECCCCCCCCCCCCCCEEECHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHH YKFEKPCPEVNVTPEVRQEGYEAFVTTDDHLMHLTGITKDQNGTKYYITKNSWGTERNTF HHCCCCCCCCCCCHHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCC GGYLNMSESYVRAKTIFLMVHKDAIPAAIKQKLGIK CCEECCCHHHHEEEEEEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure MKTKVFTLAALLCCASAMYAQESGYKFTTVASQKATPVKNQASTGTCWCFATTSFMESEL CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHH LRMGKGEYDLSEMFIVRQKYLNQLEDNYYRGGNGNLGQGSLSHTWKNAFNQVGIVPEEVY HHHCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHH HGINYNSEKHNHGEMVRYINALGNTAVKMKRRSPEYYKLINNLFDTYLGELPEKFTYKGK CCCCCCCCCCCHHHHHHHHHHHCCHHEEHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCC EYTPKSFAESLGLNMDDYIELTSFTHKPYYQKFSPEVPDNWENEQMYNLPLDEMMEVADY CCCHHHHHHHHCCCHHHHEEHHHCCCCCHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHH ALTHGYTVCWDGDVSEKGFSFKNGVAINPVVKKAEDLSGSDRARFEKMDPKEQREMLAEA HHHCCEEEEECCCCCCCCCCCCCCEEECHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHH YKFEKPCPEVNVTPEVRQEGYEAFVTTDDHLMHLTGITKDQNGTKYYITKNSWGTERNTF HHCCCCCCCCCCCHHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCC GGYLNMSESYVRAKTIFLMVHKDAIPAAIKQKLGIK CCEECCCHHHHEEEEEEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA