Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is 150006330

Identifier: 150006330

GI number: 150006330

Start: 4750038

End: 4750673

Strand: Reverse

Name: 150006330

Synonym: BVU_3846

Alternate gene names: NA

Gene position: 4750673-4750038 (Counterclockwise)

Preceding gene: 150006339

Following gene: 150006329

Centisome position: 92.01

GC content: 39.47

Gene sequence:

>636_bases
ATGAAAGTTTTGTTCTTCGCTCTGAAGAGCAGATTGTTGAAAAATGGTGAAGCACCTATTATTCTTCGTGTGACAATTGA
CGGGCAAAGTGAAGATGCCCGTATCCAAAGAAGTGTTCCTCTAAAGATGTGGAATAATGTTAAGGGATGCAGCAAAGGTA
AAGACCGGGCGTCGGTGGAACTGAACTGCTATATTGAGTCGCTGACAGTCCGTTTATACCAGATTCACAAGGAACTTTTG
TGTCAGGAGGCTTTGGTAATTCCTAAACATCTTTTGGTGAAGCTGTTCTCTAAAGAGGAACGTCGTATTGTTTTGGGTAC
GATGAAGAAGTGCATGGATGACTGGACGGCATTAATCGGCAAGGAATATCAGAAATCCACTCTTTCCCGTTATGGGAACT
GCTATGAATTGCTGGAGATTGTAATCCACGAATTCTACAGGAAAGAGTATATTTCCTTCAACGAGTTGAAGGGTGAGTTT
ATTGATGCTTTTGAAATGCACCTGCGGATAGTGAGAAAATTGTCTCAGAATACGCTGACCAAATATATGAGCTGCTTCAG
AAAAATAATGTATCAAGATGAATTATTGTTGATGTGGAAATATATAAAAAATCATGCAGTCAATGTGCTAATTTAA

Upstream 100 bases:

>100_bases
AGATATTTCTCTGAATTTCCTTATTTTATAAGGAAGTGCCTTGCTCCATATTTATTGCGTTTGTAACGCTAAAAACAGAA
TAGGATGAAACTAAGGTGCA

Downstream 100 bases:

>100_bases
AATAGCTTCTTCTTTTGTAAGCCTGAAACCGTACTTATTGCTTGTTCCCCTTGTATTTTTTTAGTGGATCGGTTATCGCT
ATATCGTACTTACATTCAAT

Product: transposase

Products: NA

Alternate protein names: Site-Specific Recombinase; Integrase Family Protein; Tyrosine Type Site-Specific Recombinase; Phage Integrase Family Protein; Integrase; Site-Specific Recombinase Phage Integrase Family; Bacteriophage Integrase

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVELNCYIESLTVRLYQIHKELL
CQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIGKEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEF
IDAFEMHLRIVRKLSQNTLTKYMSCFRKIMYQDELLLMWKYIKNHAVNVLI

Sequences:

>Translated_211_residues
MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVELNCYIESLTVRLYQIHKELL
CQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIGKEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEF
IDAFEMHLRIVRKLSQNTLTKYMSCFRKIMYQDELLLMWKYIKNHAVNVLI
>Mature_211_residues
MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVELNCYIESLTVRLYQIHKELL
CQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIGKEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEF
IDAFEMHLRIVRKLSQNTLTKYMSCFRKIMYQDELLLMWKYIKNHAVNVLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24965; Mature: 24965

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVE
CHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCEEE
LNCYIESLTVRLYQIHKELLCQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
KEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEFIDAFEMHLRIVRKLSQNTLT
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYMSCFRKIMYQDELLLMWKYIKNHAVNVLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVE
CHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCEEE
LNCYIESLTVRLYQIHKELLCQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
KEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEFIDAFEMHLRIVRKLSQNTLT
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYMSCFRKIMYQDELLLMWKYIKNHAVNVLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA