| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006281
Identifier: 150006281
GI number: 150006281
Start: 4685203
End: 4686858
Strand: Direct
Name: 150006281
Synonym: BVU_3792
Alternate gene names: NA
Gene position: 4685203-4686858 (Clockwise)
Preceding gene: 150006278
Following gene: 150006291
Centisome position: 90.74
GC content: 46.32
Gene sequence:
>1656_bases ATGACAAAGATACATTTTCGTTCTTACAATCCCAACCAAACCGTTCTTTTTCCTCAAAGAATTGATGAGGATATTGCAGA AAACGATCCGGTGCGCATGGTTGACGCCCTGGTTGAGGGCTTGAATCTTGAAAGTTTCAGAAAGCTGTATAAGGAATGCG GGCGTAGCCCTTACCACCCCAGGATGATGCTCAAGGTCATTCTGTATGCCTATATGAACAACATCTACTCCTGCCGGAAA ATTGAAAAGCTCCTTCACCGTGACATCCATTATATCTGGCTGGCCGGATATGAGAAACCGGATTTCATCACCATCAACCG TTTCCGCAACCGGGTGAAGAATGAAATCAACGAGGTGTTTACCCAAACCGTACTCCTTCTCTCTTCCAAAGGCTTCATCA GCTTGAATGTGGAATACATTGACGGGACAAAGATTGAGTCCAAAGCCAATAAGTATACTTTCGTCTGGCGGAAAACGGTT GAGCGGAACCGTGAACGCCTGATGAAGAAAATACATATCCTGCTAGGGCAGATAGACAATGTCATCGCCCAGGAGAACTC ATCGGAAAGCAATGAGGAGATTGAGTTCACTCCGGCCATGCTGACTGAAATGGCAGGAGAATTGCGTCAAGCACTCGAAC AGGTTCCTGAACCCTCCACGAAAGAGGAAAAGACTGCGTTGAAAAAGAAACGCAAACAGCTGAAGGAGTTGGAAGAGCAC AGGGACAAGCTACAGGAATACGACAACCGTCTGGACACGCTGCAGGACAGGAATTCCTATTCCAAAACGGACAATGACGC TACTTTCATGAGAATGAAGGAGGATGCCATGCGCAACGGACAGACGAAGCCCGGTTACAACCTTCAAATCGGCACCGAAA ATCAGTTCATCACCGATTTTGCACTCTTCCCGAACCCTACGGATACACTGACCCTGATTCCTTTCCTGCAATCTTTTTCA AACAGGTATGACCGGATGGCCCATACGGTGGTTGCTGATTCCGGCTATGGCTCCGAAGAGAATTACCGCTTCATGTCCGA AAACGGCATGGAAGCCTACGTAAAGTACAACTACTTCCACATGGAGCAGCGGCCGAGATTCAAACCGGACCCGTTCAAGG CCGAAAACTTCTACTACAATGAAGAACATGACTTCTGCATCTGCCCTATGGGGCAAAGGATGCGGAGGATAGGCACCAGG AATGTGAAAACCGCATCCGGATATGTCAACGAAAATGCACGGTACAGAGCTGTCAGGTGTGAAGGCTGTCCCCTGCGATG CCGCTGTTTTAAAGCAAAAGGAAACAGGACGATAGAACTGAATCATAGGCTTAGACAATACAAGCGGAGAGCCAAAGAAC TGCTCTGCTCTGAGAAAGGACTGAAACACAGAGGGCAGAGATGCATAGAACCGGAAGCCGTGTTCGGACAAATTAAAAAC AATATGAACTACAAACGTTTCCGACATTTTGGAAAGGACAAGGTCTTCATGGACTTTGCCTTCCTAGCCATTGCCTTCAA TATAAAAAAGATGTGTGCAAAACTGACAAAAAAGGGTATGAACTGGCTGATTAGACTGTTTTATGAGCTTACAACTGCTG TTTTTAGATGCTGGGAACACATAAATCAAAGAAATCTTCAAAAGATCGCAGCTTAA
Upstream 100 bases:
>100_bases GCACACCTTCTGTTTTTTACGCACAAAGCCCCGACTTTCACAAGCTGGGGCTTTGTTATTACCTAAAGATTTTGTATCTT TAGGTAATAAGAATTTCACT
Downstream 100 bases:
>100_bases AGAAAGTGAACAGATTTGTATAGTGATGAACAAAAAAAGAGGTGCATCGTGCATTACGACACACCTCCTTTAAAACATAA ACAAACAGGCGTTCATTTCC
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISPsy6 Transposase; Transposase Is4 Family Protein; Transposase IS4 Family; ISCpe5 Transposase; ISCps6 Transposase; ISNCY Family Transposase; ISPpu20 Transposase; LOW QUALITY PROTEIN ISNCY Family Transposase; Transposase Is4 Family; Transposase ISNCY Family Protein
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MTKIHFRSYNPNQTVLFPQRIDEDIAENDPVRMVDALVEGLNLESFRKLYKECGRSPYHPRMMLKVILYAYMNNIYSCRK IEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTV ERNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDFALFPNPTDTLTLIPFLQSFS NRYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTR NVKTASGYVNENARYRAVRCEGCPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKN NMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKKGMNWLIRLFYELTTAVFRCWEHINQRNLQKIAA
Sequences:
>Translated_551_residues MTKIHFRSYNPNQTVLFPQRIDEDIAENDPVRMVDALVEGLNLESFRKLYKECGRSPYHPRMMLKVILYAYMNNIYSCRK IEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTV ERNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDFALFPNPTDTLTLIPFLQSFS NRYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTR NVKTASGYVNENARYRAVRCEGCPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKN NMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKKGMNWLIRLFYELTTAVFRCWEHINQRNLQKIAA >Mature_550_residues TKIHFRSYNPNQTVLFPQRIDEDIAENDPVRMVDALVEGLNLESFRKLYKECGRSPYHPRMMLKVILYAYMNNIYSCRKI EKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVE RNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEHR DKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDFALFPNPTDTLTLIPFLQSFSN RYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTRN VKTASGYVNENARYRAVRCEGCPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKNN MNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKKGMNWLIRLFYELTTAVFRCWEHINQRNLQKIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65439; Mature: 65308
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIHFRSYNPNQTVLFPQRIDEDIAENDPVRMVDALVEGLNLESFRKLYKECGRSPYHP CCEEEEECCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH RMMLKVILYAYMNNIYSCRKIEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHH TQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVERNRERLMKKIHILLGQIDN HHHHHHHCCCCEEEEEEEEECCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH VIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH HHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDF HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE ALFPNPTDTLTLIPFLQSFSNRYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFH EECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCEEEEEEEEEE MEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTRNVKTASGYVNENARYRAVRC ECCCCCCCCCCCCCCCCEECCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE EGCPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKN CCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHC NMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKKGMNWLIRLFYELTTAVFRCWEH CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INQRNLQKIAA HHHHHHHHHCC >Mature Secondary Structure TKIHFRSYNPNQTVLFPQRIDEDIAENDPVRMVDALVEGLNLESFRKLYKECGRSPYHP CEEEEECCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH RMMLKVILYAYMNNIYSCRKIEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHH TQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVERNRERLMKKIHILLGQIDN HHHHHHHCCCCEEEEEEEEECCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH VIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH HHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDF HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE ALFPNPTDTLTLIPFLQSFSNRYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFH EECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCEEEEEEEEEE MEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTRNVKTASGYVNENARYRAVRC ECCCCCCCCCCCCCCCCEECCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE EGCPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKN CCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHC NMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKKGMNWLIRLFYELTTAVFRCWEH CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INQRNLQKIAA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA