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The map label for this gene is intQ [C]

Identifier: 150006166

GI number: 150006166

Start: 4549701

End: 4550627

Strand: Reverse

Name: intQ [C]

Synonym: BVU_3677

Alternate gene names: 150006166

Gene position: 4550627-4549701 (Counterclockwise)

Preceding gene: 150006172

Following gene: 150006161

Centisome position: 88.14

GC content: 38.08

Gene sequence:

>927_bases
ATGAGACAAAAGACAATTAGAGAAATCTCGGTTGCATGGAAAGAGTACAAGCAACCTTATGTGAAACAGTCCACAATGGC
TGCTTATGTGCTTATCTTGGAGAATCATATTCTTCCAAACTTTGGAGAAAGTGATACGCTCCATGAACAGGCTGTGCAAG
ACTTCGTTTTGCGGAAAATTGAGAATGGGCTGAGTGTGAAATCCGTAAAAGACATTTTGATTGTTCTGAAAATGGTTATG
AAATTCGGTGTGAAAAATGAATGGATGGATTATCAAGAGTGGGACATCAAATATCCGTCTTCTTCAACAACCAAAGAATT
GGAAGTACTGTCAGTTGCCAATCACAAGAAAATACTCAATCATATTCAAAACCATTTCTCCTTTACCGGACTGGGTATCT
ACATCAGTCTTTGTACAGGACTTCGTATTGGGGAAGTTTGCGCTTTGAAGTGGAGTGACATCAATGTTTCTGAGGGAACG
ATTACCGTTAATCGTACAATTGAACGGATTTACATTATTGATGGAACGAAGAAACATACTGAGTTGGTAATCAATACTCC
CAAGACACAAAACTCATGTCGGGAAATTCCTATGACAAAGGAGCTTCTTGCAATGGTAAAACCACTAAAGAAGGTCGTTA
ATGAAGATTTCTATGTCTTGACTAATGATGAATATCCAACCGAACCTCGTACCTACCGTAATTATTACGGCAAATTAATG
GAAAAATTGGGTATTCCTAAATTAAAATATCATGGGCTTCGCCATAGTTTTGCCACTCGTTGTATAGAAGCTGGCTGTGA
CTACAAAACCGTTAGTGTATTGTTAGGGCATTCCAACATATCAACTACATTGGACTTATATGTTCATCCAAATATGGAAC
AGAAAAAGCGTTGTATTGCGAAAGTCTTTAAATCGCTGGGGAAATGA

Upstream 100 bases:

>100_bases
TACCATTTCCCACTCCCCACTAAACTCCGGGAATCTCAAATGGGGAACATCAGTGATTTATTATTCTCTAATTATATGTA
CAACATATTAATATACGATT

Downstream 100 bases:

>100_bases
TGTAATATGTAGAGCGAAGGAATTTTATAGTAATTTCTTCGCTCTCAATCATTGCGTACATTATGAGAATGGAGTAATAA
CACTTTTACCAACATTTATA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRQKTIREISVAWKEYKQPYVKQSTMAAYVLILENHILPNFGESDTLHEQAVQDFVLRKIENGLSVKSVKDILIVLKMVM
KFGVKNEWMDYQEWDIKYPSSSTTKELEVLSVANHKKILNHIQNHFSFTGLGIYISLCTGLRIGEVCALKWSDINVSEGT
ITVNRTIERIYIIDGTKKHTELVINTPKTQNSCREIPMTKELLAMVKPLKKVVNEDFYVLTNDEYPTEPRTYRNYYGKLM
EKLGIPKLKYHGLRHSFATRCIEAGCDYKTVSVLLGHSNISTTLDLYVHPNMEQKKRCIAKVFKSLGK

Sequences:

>Translated_308_residues
MRQKTIREISVAWKEYKQPYVKQSTMAAYVLILENHILPNFGESDTLHEQAVQDFVLRKIENGLSVKSVKDILIVLKMVM
KFGVKNEWMDYQEWDIKYPSSSTTKELEVLSVANHKKILNHIQNHFSFTGLGIYISLCTGLRIGEVCALKWSDINVSEGT
ITVNRTIERIYIIDGTKKHTELVINTPKTQNSCREIPMTKELLAMVKPLKKVVNEDFYVLTNDEYPTEPRTYRNYYGKLM
EKLGIPKLKYHGLRHSFATRCIEAGCDYKTVSVLLGHSNISTTLDLYVHPNMEQKKRCIAKVFKSLGK
>Mature_308_residues
MRQKTIREISVAWKEYKQPYVKQSTMAAYVLILENHILPNFGESDTLHEQAVQDFVLRKIENGLSVKSVKDILIVLKMVM
KFGVKNEWMDYQEWDIKYPSSSTTKELEVLSVANHKKILNHIQNHFSFTGLGIYISLCTGLRIGEVCALKWSDINVSEGT
ITVNRTIERIYIIDGTKKHTELVINTPKTQNSCREIPMTKELLAMVKPLKKVVNEDFYVLTNDEYPTEPRTYRNYYGKLM
EKLGIPKLKYHGLRHSFATRCIEAGCDYKTVSVLLGHSNISTTLDLYVHPNMEQKKRCIAKVFKSLGK

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 35527; Mature: 35527

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQKTIREISVAWKEYKQPYVKQSTMAAYVLILENHILPNFGESDTLHEQAVQDFVLRKI
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ENGLSVKSVKDILIVLKMVMKFGVKNEWMDYQEWDIKYPSSSTTKELEVLSVANHKKILN
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH
HIQNHFSFTGLGIYISLCTGLRIGEVCALKWSDINVSEGTITVNRTIERIYIIDGTKKHT
HHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCCC
ELVINTPKTQNSCREIPMTKELLAMVKPLKKVVNEDFYVLTNDEYPTEPRTYRNYYGKLM
EEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHH
EKLGIPKLKYHGLRHSFATRCIEAGCDYKTVSVLLGHSNISTTLDLYVHPNMEQKKRCIA
HHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCHHHHHHHHH
KVFKSLGK
HHHHHHCC
>Mature Secondary Structure
MRQKTIREISVAWKEYKQPYVKQSTMAAYVLILENHILPNFGESDTLHEQAVQDFVLRKI
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ENGLSVKSVKDILIVLKMVMKFGVKNEWMDYQEWDIKYPSSSTTKELEVLSVANHKKILN
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH
HIQNHFSFTGLGIYISLCTGLRIGEVCALKWSDINVSEGTITVNRTIERIYIIDGTKKHT
HHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCCC
ELVINTPKTQNSCREIPMTKELLAMVKPLKKVVNEDFYVLTNDEYPTEPRTYRNYYGKLM
EEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHH
EKLGIPKLKYHGLRHSFATRCIEAGCDYKTVSVLLGHSNISTTLDLYVHPNMEQKKRCIA
HHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCHHHHHHHHH
KVFKSLGK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]