| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006068
Identifier: 150006068
GI number: 150006068
Start: 4437123
End: 4438556
Strand: Reverse
Name: 150006068
Synonym: BVU_3577
Alternate gene names: NA
Gene position: 4438556-4437123 (Counterclockwise)
Preceding gene: 150006069
Following gene: 150006067
Centisome position: 85.97
GC content: 42.89
Gene sequence:
>1434_bases ATGCATTATAAAATATTTTTATGTGTTCTTTTGTTCCCGGTTTCATTATCAGCTCAAAACGGGGAATTATCTTTAACATT GGAACAATCTGCCAGCCTGATGAACAAGGGCAGCCGCACGTTGCAAATGGCGGATAAGGCTGTAGATATAGCACGCAGTG AGCGACAAAAGATGAATGCTTTTTGGTATCCGTCTTTGAATGCATCGGGTGCATACGTCCATTTGTCCAACCATATTGAG GTCAAGGAACCTTTAAGGCAATTTACCGATCCGGCAAAAGACTTTGTACATTCCATTGTGCCCGATGATAAATTTATTTC TTCTATTCTTGATAATATAGGTGCGCATACCCTTACTTTTCCTTTATTAGAACGTAACCTGACGACCATAGATGCTAATG TGATGTGGCCGCTTTTTACAGGCGGAAAACGAATTTTTGCAAGCCGTATCGGCAACCGTATGGTAGATTTGGCCAAAGCA GGTAGGGAAGAGGCGGGAGCTACTTTGCAATCGGAGTTGGTGGAAACTTATTATGCTTTGCGTCTGGCGCAAAGAGTGGT GGATGTACGCGAGCAAACCTTTTTAGGCTTGCAGAAACATTACCGTAATGCCATGAAGCTGGAGGAGAACGGTATGATAA ATAAGGCCGAACGCCTCTTTGCTCAGGTCACTATGGACGAGGCCAGACGTGAGTTGGAATCTGCCCGGAAAGATTTGAAT GTGGCGCAAAATGCCTTGAAAGTCTTGTTGAATGTGGAAGACGCCATATCCATCAACCCCAGTTCTCCTTTGTTTATGAA CCATGATCTGCCCGATGAACTTTATTTCAAGAATCTGGTAAGTACCGGCAGCTATATAGTAAGTAAATTGCGAATACAGG AGGCGATGGCTGATAATCAATTGAAAATCAGTAAAAGTGCATATATTCCTACCATTGCATTGTTTGGAAAGCAGACACTT TATGCAGAGAATCTTCCGAAAAACCTGATGCCCCGTACTTTGGTAGGAGTGGGTTTTACTTGGAATATATTCGACGGACT GAACCGTGAAGCCAATATCCGTCAGACACGTCTTACTAAACAAACTTTGCAACTGGGAAGGGAAAAGGCTCAGAATGAAT TGGGTGTTTTGGTAGACAAGTTATATAGCGAAATTCAGAATGCAAAGGATGATGTTGCCGCACTCAACACCACGATTGAG ATGAGTCGTGAATTGGTACGTATCCGTAAAAAATCCTTTCAGGAAGGAATGGCTACCTCTACTGATGTGATTGATGCGGA AACGATGTTATCCAAGGTGCAGATTGCTTTTTTGCTGGCTTATTATAAATATGATGTGGCACTGGCATCTCTGCTCTCTA CTTGCGGAATGCCCGAAAGTTTTTGGCAGTATAGCCGTACCGGACAAACCGAGAACTTTATATTCGGGAAATAA
Upstream 100 bases:
>100_bases TTGGTTTTAAATTCACTTTCGAGTTATTTAATAAATAATCCTGTTCAAACAATCTGTTTGGTTTTCTGTTTATTACAACA TAACAGAAACTAAACAGTGT
Downstream 100 bases:
>100_bases TAAAAAAAGAAAACAATATGGAAAAAGAGAAGAAACAGTTAGGAGTCGCTTTTATCGTTGTTCTTGTGGCCATTGTTATG GTGTCTGCCATTGGGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein; Type I Secretion Outer Membrane Protein; LipD Protein; RND Family Drug Transporter; Outer Membrane Efflux Protein Domain Protein; Outer Membrane Protein-Like; RND Family Efflux Pump Outer Membrane Protein
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MHYKIFLCVLLFPVSLSAQNGELSLTLEQSASLMNKGSRTLQMADKAVDIARSERQKMNAFWYPSLNASGAYVHLSNHIE VKEPLRQFTDPAKDFVHSIVPDDKFISSILDNIGAHTLTFPLLERNLTTIDANVMWPLFTGGKRIFASRIGNRMVDLAKA GREEAGATLQSELVETYYALRLAQRVVDVREQTFLGLQKHYRNAMKLEENGMINKAERLFAQVTMDEARRELESARKDLN VAQNALKVLLNVEDAISINPSSPLFMNHDLPDELYFKNLVSTGSYIVSKLRIQEAMADNQLKISKSAYIPTIALFGKQTL YAENLPKNLMPRTLVGVGFTWNIFDGLNREANIRQTRLTKQTLQLGREKAQNELGVLVDKLYSEIQNAKDDVAALNTTIE MSRELVRIRKKSFQEGMATSTDVIDAETMLSKVQIAFLLAYYKYDVALASLLSTCGMPESFWQYSRTGQTENFIFGK
Sequences:
>Translated_477_residues MHYKIFLCVLLFPVSLSAQNGELSLTLEQSASLMNKGSRTLQMADKAVDIARSERQKMNAFWYPSLNASGAYVHLSNHIE VKEPLRQFTDPAKDFVHSIVPDDKFISSILDNIGAHTLTFPLLERNLTTIDANVMWPLFTGGKRIFASRIGNRMVDLAKA GREEAGATLQSELVETYYALRLAQRVVDVREQTFLGLQKHYRNAMKLEENGMINKAERLFAQVTMDEARRELESARKDLN VAQNALKVLLNVEDAISINPSSPLFMNHDLPDELYFKNLVSTGSYIVSKLRIQEAMADNQLKISKSAYIPTIALFGKQTL YAENLPKNLMPRTLVGVGFTWNIFDGLNREANIRQTRLTKQTLQLGREKAQNELGVLVDKLYSEIQNAKDDVAALNTTIE MSRELVRIRKKSFQEGMATSTDVIDAETMLSKVQIAFLLAYYKYDVALASLLSTCGMPESFWQYSRTGQTENFIFGK >Mature_477_residues MHYKIFLCVLLFPVSLSAQNGELSLTLEQSASLMNKGSRTLQMADKAVDIARSERQKMNAFWYPSLNASGAYVHLSNHIE VKEPLRQFTDPAKDFVHSIVPDDKFISSILDNIGAHTLTFPLLERNLTTIDANVMWPLFTGGKRIFASRIGNRMVDLAKA GREEAGATLQSELVETYYALRLAQRVVDVREQTFLGLQKHYRNAMKLEENGMINKAERLFAQVTMDEARRELESARKDLN VAQNALKVLLNVEDAISINPSSPLFMNHDLPDELYFKNLVSTGSYIVSKLRIQEAMADNQLKISKSAYIPTIALFGKQTL YAENLPKNLMPRTLVGVGFTWNIFDGLNREANIRQTRLTKQTLQLGREKAQNELGVLVDKLYSEIQNAKDDVAALNTTIE MSRELVRIRKKSFQEGMATSTDVIDAETMLSKVQIAFLLAYYKYDVALASLLSTCGMPESFWQYSRTGQTENFIFGK
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53879; Mature: 53879
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYKIFLCVLLFPVSLSAQNGELSLTLEQSASLMNKGSRTLQMADKAVDIARSERQKMNA CCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCE FWYPSLNASGAYVHLSNHIEVKEPLRQFTDPAKDFVHSIVPDDKFISSILDNIGAHTLTF EECCCCCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH PLLERNLTTIDANVMWPLFTGGKRIFASRIGNRMVDLAKAGREEAGATLQSELVETYYAL HHHHCCCEEEECCEEEEEHHCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHH RLAQRVVDVREQTFLGLQKHYRNAMKLEENGMINKAERLFAQVTMDEARRELESARKDLN HHHHHHHHHHHHHHHHHHHHHHHHHHECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQNALKVLLNVEDAISINPSSPLFMNHDLPDELYFKNLVSTGSYIVSKLRIQEAMADNQ HHHHHHHHHHHHHHHEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LKISKSAYIPTIALFGKQTLYAENLPKNLMPRTLVGVGFTWNIFDGLNREANIRQTRLTK EEECCCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHHCCEEEEHHHCCCCCCCHHHHHHHH QTLQLGREKAQNELGVLVDKLYSEIQNAKDDVAALNTTIEMSRELVRIRKKSFQEGMATS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TDVIDAETMLSKVQIAFLLAYYKYDVALASLLSTCGMPESFWQYSRTGQTENFIFGK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHYKIFLCVLLFPVSLSAQNGELSLTLEQSASLMNKGSRTLQMADKAVDIARSERQKMNA CCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCE FWYPSLNASGAYVHLSNHIEVKEPLRQFTDPAKDFVHSIVPDDKFISSILDNIGAHTLTF EECCCCCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH PLLERNLTTIDANVMWPLFTGGKRIFASRIGNRMVDLAKAGREEAGATLQSELVETYYAL HHHHCCCEEEECCEEEEEHHCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHH RLAQRVVDVREQTFLGLQKHYRNAMKLEENGMINKAERLFAQVTMDEARRELESARKDLN HHHHHHHHHHHHHHHHHHHHHHHHHHECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQNALKVLLNVEDAISINPSSPLFMNHDLPDELYFKNLVSTGSYIVSKLRIQEAMADNQ HHHHHHHHHHHHHHHEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LKISKSAYIPTIALFGKQTLYAENLPKNLMPRTLVGVGFTWNIFDGLNREANIRQTRLTK EEECCCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHHCCEEEEHHHCCCCCCCHHHHHHHH QTLQLGREKAQNELGVLVDKLYSEIQNAKDDVAALNTTIEMSRELVRIRKKSFQEGMATS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TDVIDAETMLSKVQIAFLLAYYKYDVALASLLSTCGMPESFWQYSRTGQTENFIFGK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA