Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150005947

Identifier: 150005947

GI number: 150005947

Start: 4293393

End: 4294214

Strand: Reverse

Name: 150005947

Synonym: BVU_3445

Alternate gene names: NA

Gene position: 4294214-4293393 (Counterclockwise)

Preceding gene: 150005948

Following gene: 150005946

Centisome position: 83.17

GC content: 40.75

Gene sequence:

>822_bases
ATGATTAAGGATATGAAGACCATGCATCGTAACAAACCCAACCGTATGAGTGATGCAGAGATTATGGTTATTCTAATCCT
GTTTCACTCCGGTGGTTTCCGTTGTTTCAAGCATTACTACAAGGAGTATGTCTGTAAACATCTGAAACACCTTTTTCCTC
GTCAGGTTTCTTATAACCGTTTTGTGGAACTGGAGAAGGAAGTATTGCTTCCCATGACCATATTCATCAAAAGAGTACTG
CTGGGAACTTGTACCGGCATCAGTTTCGTTGATTCCACTCCCTTATGTGTATGTCGTAACCAAAGAATCTTGATTCATAA
GACATTTGAAGGGCTTGCCGAGCGTGGAAGATGTTCTATGGGATGGTTCTTCGGATTCAAGCTGCATCTGATAATCAATG
ACAAGGGTGAAATCCTCAATTTCATGTTCACGCCTGGAAACGTGGATGACCGGGAACCGTTGAAACAGGGTAGGTTTCTG
GAAAACATCAAAGGAAAACTATGTGCAGACAAGGGATATATAGGTCAGGCTCTGTTTGAAAACCTTTTCCTTAATGGCAT
ACAACTTGTTACTAAAGTTAAAAATAATATGAGGAACTCACTGATGAGTATTGCCGACAAGATTTTGCTAAGAAAAAGAG
CCTTGATTGAAACGGTCAATGACGAACTGAAGAACATCGCACAGATTGAACACTCAAGACATCGTTCATTCAGTAACTTT
ATAGCCAACTCCTTGTCGGCTATCGCGGCATACTGCTTTTTTGAAAAGAAGCCCGCCATTGACGTAAAGTTTGTCAATGA
CGGACAACTTGCTATTTTTTGA

Upstream 100 bases:

>100_bases
TTAAACGATTACCACTATGTTTCCAGAGTCTAAAGTTACAGAGATTTATTGTATGGCCGATGATTTTTGCAAGGAATTTA
CATTGCAACAGGAAAAATAT

Downstream 100 bases:

>100_bases
TTTTATTTCGAACTCACGTTATATTAAAACATGATTGTGTATCTTTTGACATATTTGATACATTAGTAAAAAGATATGTT
TCCTTGCCTACAGATGTGTT

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; IS4 Family Transposase; Transposase And Inactivated Derivative; Transposase For Insertion Sequence Element; Membrane-Associated Metal-Dependent Hydrolase; Transposase Family Protein; Transposase IS; Protease; LOW QUALITY PROTEIN ISPg3 Transposase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIKDMKTMHRNKPNRMSDAEIMVILILFHSGGFRCFKHYYKEYVCKHLKHLFPRQVSYNRFVELEKEVLLPMTIFIKRVL
LGTCTGISFVDSTPLCVCRNQRILIHKTFEGLAERGRCSMGWFFGFKLHLIINDKGEILNFMFTPGNVDDREPLKQGRFL
ENIKGKLCADKGYIGQALFENLFLNGIQLVTKVKNNMRNSLMSIADKILLRKRALIETVNDELKNIAQIEHSRHRSFSNF
IANSLSAIAAYCFFEKKPAIDVKFVNDGQLAIF

Sequences:

>Translated_273_residues
MIKDMKTMHRNKPNRMSDAEIMVILILFHSGGFRCFKHYYKEYVCKHLKHLFPRQVSYNRFVELEKEVLLPMTIFIKRVL
LGTCTGISFVDSTPLCVCRNQRILIHKTFEGLAERGRCSMGWFFGFKLHLIINDKGEILNFMFTPGNVDDREPLKQGRFL
ENIKGKLCADKGYIGQALFENLFLNGIQLVTKVKNNMRNSLMSIADKILLRKRALIETVNDELKNIAQIEHSRHRSFSNF
IANSLSAIAAYCFFEKKPAIDVKFVNDGQLAIF
>Mature_273_residues
MIKDMKTMHRNKPNRMSDAEIMVILILFHSGGFRCFKHYYKEYVCKHLKHLFPRQVSYNRFVELEKEVLLPMTIFIKRVL
LGTCTGISFVDSTPLCVCRNQRILIHKTFEGLAERGRCSMGWFFGFKLHLIINDKGEILNFMFTPGNVDDREPLKQGRFL
ENIKGKLCADKGYIGQALFENLFLNGIQLVTKVKNNMRNSLMSIADKILLRKRALIETVNDELKNIAQIEHSRHRSFSNF
IANSLSAIAAYCFFEKKPAIDVKFVNDGQLAIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31622; Mature: 31622

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDMKTMHRNKPNRMSDAEIMVILILFHSGGFRCFKHYYKEYVCKHLKHLFPRQVSYNR
CCCCHHHHHCCCCCCCCCHHHEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FVELEKEVLLPMTIFIKRVLLGTCTGISFVDSTPLCVCRNQRILIHKTFEGLAERGRCSM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEHHHHHHHHCCCCCE
GWFFGFKLHLIINDKGEILNFMFTPGNVDDREPLKQGRFLENIKGKLCADKGYIGQALFE
EEEEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHCHHHHHHCCCEECCCCCHHHHHHH
NLFLNGIQLVTKVKNNMRNSLMSIADKILLRKRALIETVNDELKNIAQIEHSRHRSFSNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IANSLSAIAAYCFFEKKPAIDVKFVNDGQLAIF
HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEC
>Mature Secondary Structure
MIKDMKTMHRNKPNRMSDAEIMVILILFHSGGFRCFKHYYKEYVCKHLKHLFPRQVSYNR
CCCCHHHHHCCCCCCCCCHHHEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FVELEKEVLLPMTIFIKRVLLGTCTGISFVDSTPLCVCRNQRILIHKTFEGLAERGRCSM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEHHHHHHHHCCCCCE
GWFFGFKLHLIINDKGEILNFMFTPGNVDDREPLKQGRFLENIKGKLCADKGYIGQALFE
EEEEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHCHHHHHHCCCEECCCCCHHHHHHH
NLFLNGIQLVTKVKNNMRNSLMSIADKILLRKRALIETVNDELKNIAQIEHSRHRSFSNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IANSLSAIAAYCFFEKKPAIDVKFVNDGQLAIF
HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA