| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yjbH [C]
Identifier: 150005943
GI number: 150005943
Start: 4288667
End: 4289521
Strand: Reverse
Name: yjbH [C]
Synonym: BVU_3441
Alternate gene names: 150005943
Gene position: 4289521-4288667 (Counterclockwise)
Preceding gene: 150005944
Following gene: 150005940
Centisome position: 83.08
GC content: 42.46
Gene sequence:
>855_bases GTGAAATTAAGAACTCTAATATTTCTGGGGGGACTCTTTGGAGGAATGAATGTTATCAAAGGGCAGGCTTTTTATGGTAC TACAGGACTACTTCATGCACCTACTGCCGTTATGCAGAAAGATAAAACCGTTATGCTGGGAGGAAATATGCTTGATGTAA ATATACTTTCCCGATATTGGGTGAGAAGTGAATATCATCCCTATACCTATAACTATTATATAAATTGTACTTTGTTTCCT TGGCTGGAAGTAGCATATACTTGTACGTTGGTAAAGGGGATACATGGTTCTTCTTATTGGCCTCAGCAAACTTGGGGCAG GTTTACCAATCAGGACAGATCGTTTCATTTCCGGTTGAGGGCATGGAAAGAAGGCTGGTGGAAGGCTTGGACGCCTCAGA TAGTGATTGGTGCGAATGATCCGGGAAGCCATTCTTCAAATGGAGGTGGAGACATAGATTGGGGGGGCGGTGGTAGCGGA AACCACAATTACTTGACACGTTATTATCTGGCGGCAACGAAACATGTTGAATTTAGTGGAATAGGTACAGTGGGGGGGCA TGTAGCTTGGGTTATCGGTAAAGCTATGAGTGATGTGCATTATAGCCGTCTTGCTGCAGGGGTAAACTTTCATTTTGGCA TGAAGGGCGAAGGTTTCTGGCAGAAAGCTCTGAATGGATTTAATCTGATGGCGGAAGTGTGTCCCGGACATGCGGAAGAT CTGCATACAGCAACTTATACTGTGAATGTGGGTGGAACTTATTCAATATGGAAAGACCATATCAATCTTATTGCTGAACT GAATGACGGTAAATTTTTTAGCGGAGGTATATTCTTTAAATTACATCTCAAATAA
Upstream 100 bases:
>100_bases TGGCAACAACAGGACGAAGATAGCAGTAGGAATAATTTTTCCGAGTATTTTTAATACATCTGTTTTCATGCTGCAAATAT AAATTAAAATTCATAGAATA
Downstream 100 bases:
>100_bases CTGACTTGATTTCTAGTGGATGAAGCATTATAAGAATAGCCGGAATCACTTGGAAAAAGTAGTTCCGGCTATTCTTATAT AACGATATTTGTATGTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYWVRSEYHPYTYNYYINCTLFP WLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLRAWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSG NHNYLTRYYLAATKHVEFSGIGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK
Sequences:
>Translated_284_residues MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYWVRSEYHPYTYNYYINCTLFP WLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLRAWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSG NHNYLTRYYLAATKHVEFSGIGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK >Mature_284_residues MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYWVRSEYHPYTYNYYINCTLFP WLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLRAWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSG NHNYLTRYYLAATKHVEFSGIGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31765; Mature: 31765
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYW CCEEEEEEEHHHHCCCHHHCCCEEECCCCCCCCCHHHHCCCCEEEECCCEEEHHHHHHHH VRSEYHPYTYNYYINCTLFPWLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLR HCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEE AWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSGNHNYLTRYYLAATKHVEFSG EECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECEEEECC IGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCHHHHHHHCCCCCCC LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK CEEEEEEEECCCCHHHHHHCEEEEEEECCCEEEECEEEEEEEEC >Mature Secondary Structure MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYW CCEEEEEEEHHHHCCCHHHCCCEEECCCCCCCCCHHHHCCCCEEEECCCEEEHHHHHHHH VRSEYHPYTYNYYINCTLFPWLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLR HCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEE AWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSGNHNYLTRYYLAATKHVEFSG EECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECEEEECC IGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCHHHHHHHCCCCCCC LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK CEEEEEEEECCCCHHHHHHCEEEEEEECCCEEEECEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA