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The map label for this gene is yrrC [H]

Identifier: 150005913

GI number: 150005913

Start: 4249215

End: 4251476

Strand: Reverse

Name: yrrC [H]

Synonym: BVU_3409

Alternate gene names: 150005913

Gene position: 4251476-4249215 (Counterclockwise)

Preceding gene: 150005914

Following gene: 150005912

Centisome position: 82.34

GC content: 52.61

Gene sequence:

>2262_bases
ATGCTCAAACTTCGCTGCGTAGTAGAAAGAATCACCTACCAAAATCCCGAGAACGGGTATTCGGTGATGAGGGTCAAGGT
CAAAAGCTATGACGACCTGGTGACACTGGTGGGCAACCTGCTGGAGGTGCCTGCCGGAAGTGTGCTGTTATGTGAGGGCG
AATGGAAGGTGGACAAACGCTACGGCAGCCAGTTCGTGTGCCAATCGTGGGAGGAGGTGATGCCGGCCACGGTCTATGGC
ATTGAGAAGTATCTGGGAAGCGGACTGGTAAAAGGCATCGGTCCGAAGTTTGCCCAACTCATCGTCCGTCAGTTTGGTCT
GGAAACCATCGATGTGATCGAGACCGACATCGAACGGCTCTACGAGGTGCCGGGCATCGGCAAGAAGCGCGTGGAGAAGA
TTTGCGAGAGTTGGGAGAAGCAGAAGGACATCAAGAATGTGATGCTTTTCCTGCAGGGGTATGGTGTCAGTACGGCCTAT
GCGGCCAAGATTTACCGCCAGTACGGCAAGGAAAGCATCGACAAGGTAAAGGAGAACCCTTACCGACTGGCTGACGACAT
CTGGGGCATCGGCTTCAAGACGGCCGACAGCATTGCAGCGAAGATGGGCTACGAAAAAAATGACCTCCGCCGCTGTAAGA
GTGGCATCATCTACACCTTGAATCAGTTGGCCAACGAAGGGCATGTCTATGCTGAAGAGGAACAGTTGGTACAAGCTGCG
TTGGAATTGCTGGAAGCGGACGAAGCGCCTATCCGTGAGGCTTTGAATAATATGGTGCAGACGGATGACTTGAAGTTGGA
AGACGAAGCCATCTATCTGCCGCCTTTCTACTTTGCCGAAGTAGGTACGACGAACAGGCTGCAGGCTTTGCTCCGTGAAT
CGGAACAGAACCTCTTTGCCAAGAAGGTAGATGTGCAGGCTTTATCAAAGGAAACTGGCATTGAATATGACGAGGTGCAG
CTGCAGGCCATCGAGGAAGCCATCCGTTCAAAAGTAATGGTACTGACGGGGGGACCGGGTACGGGTAAGACTACCACCAC
GCAGGGTATCATTGCGGCTTTGAAGCATATGGGACTTCGCATTCTGCTGGCGGCTCCTACGGGACGGGCAGCCAAACGTA
TGAGTGAAGCCACCGGGATGGAGTCCAAGACCATTCACCGGCTGCTGGAGTTCAATCCGAAAGACGGCTACAAGCGGAAT
GATGAGAATCCCTTGGAAGGGGACGCACTGATTGTGGACGAGTGTTCGATGATTGACATCATCCTGATGAACAACCTGAT
GAAGGCCATTCCCTCTTCCATGCGCGTGGTCTTCGTGGGCGACATTGACCAGTTGCCGAGTGTTGGTGCCGGCAATGTGT
TGCGCGACATCATTGAGAGTGAAAAGATTCCGGTGATTCGACTGACCCGTATTTTCCGTCAGGCGCAGACCAGCCGCATT
GTGATGAGTGCCCATGCCATCAACCAGGGACGTTTCCCCGATACGAGCAACGGCAAGCAGACGGATTTCTTTTTCATCCA
ACAGGAGGAGCCGGAGAAGGTGGCGGAGGAAATTGTGAATCTGGTGAAGAACCGCCTGCCGAAAGCCTACAGCCAAGGGG
TGAGCAACATTCAGGTTTTGACCCCCATGCAACGCGGTGTGGTGGGTGCTGCCAATCTGAACATGGCCTTGCAAAATGCA
CTGAATCCTTCCCAGATTGCCTTGAACAGGGGAGGTTATTCCTTCCGTCAGGGCGACCGGGTGATGCAGCTGCGCAACAA
CTACGACAAGGATGTGTTCAACGGGGACCTCGGCTATGTGGAATCGGTAGATATGGAGGAACGTACGCTGCTGGTGAACT
TTGAGGAGCGTCAGGTGGAATACGAAGCCTCAGAACTGGATGAGTTGACACTGGCCTACGCTACGACCATTCACAAGTCG
CAAGGATCGGAATATCCCATCGTGGTGATGCCAGTTCTTATGACACACTATGTAATGCTGCAGCGTAACCTGGTTTATAC
GGGCATCACCCGTGCCAAGAAGATTTGCGTGCTCATCGGTACCAAAAAGGCGCTTTCATTTGCCATCCGCAACATGTCGG
TGTTGAAACGGAACACGAAACTGAAGGAGCGACTGAATCCGGAATTGGCAAAACCCACGGAGAAGAAGCCTGTAGAGAAG
AAGTTGAGCAAAATTTATCCGATGAACGAACCTGTTTTGGAAGCTGCCGCCGAACCCAGCGAAAGTTACGGAAAGAAACA
ACCTACCATTGAAACGAAATAG

Upstream 100 bases:

>100_bases
TAAGCATAATTAGATTGCCTCAAGACGAGGAGTATGAACAAGTTCTAAACGGGCAATCAGATACTCCGCCATTTGATGAA
CTATAAGATATTTTTTAATC

Downstream 100 bases:

>100_bases
AATGACAACCATGATGACCATTGATACTACCAATATGTGTTCCCACCTTCAAAAGAAGCTGTTTCAGCCGGAAGGTGCAT
ATTATCCGATATGGAAAGCC

Product: exonuclease V subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MLKLRCVVERITYQNPENGYSVMRVKVKSYDDLVTLVGNLLEVPAGSVLLCEGEWKVDKRYGSQFVCQSWEEVMPATVYG
IEKYLGSGLVKGIGPKFAQLIVRQFGLETIDVIETDIERLYEVPGIGKKRVEKICESWEKQKDIKNVMLFLQGYGVSTAY
AAKIYRQYGKESIDKVKENPYRLADDIWGIGFKTADSIAAKMGYEKNDLRRCKSGIIYTLNQLANEGHVYAEEEQLVQAA
LELLEADEAPIREALNNMVQTDDLKLEDEAIYLPPFYFAEVGTTNRLQALLRESEQNLFAKKVDVQALSKETGIEYDEVQ
LQAIEEAIRSKVMVLTGGPGTGKTTTTQGIIAALKHMGLRILLAAPTGRAAKRMSEATGMESKTIHRLLEFNPKDGYKRN
DENPLEGDALIVDECSMIDIILMNNLMKAIPSSMRVVFVGDIDQLPSVGAGNVLRDIIESEKIPVIRLTRIFRQAQTSRI
VMSAHAINQGRFPDTSNGKQTDFFFIQQEEPEKVAEEIVNLVKNRLPKAYSQGVSNIQVLTPMQRGVVGAANLNMALQNA
LNPSQIALNRGGYSFRQGDRVMQLRNNYDKDVFNGDLGYVESVDMEERTLLVNFEERQVEYEASELDELTLAYATTIHKS
QGSEYPIVVMPVLMTHYVMLQRNLVYTGITRAKKICVLIGTKKALSFAIRNMSVLKRNTKLKERLNPELAKPTEKKPVEK
KLSKIYPMNEPVLEAAAEPSESYGKKQPTIETK

Sequences:

>Translated_753_residues
MLKLRCVVERITYQNPENGYSVMRVKVKSYDDLVTLVGNLLEVPAGSVLLCEGEWKVDKRYGSQFVCQSWEEVMPATVYG
IEKYLGSGLVKGIGPKFAQLIVRQFGLETIDVIETDIERLYEVPGIGKKRVEKICESWEKQKDIKNVMLFLQGYGVSTAY
AAKIYRQYGKESIDKVKENPYRLADDIWGIGFKTADSIAAKMGYEKNDLRRCKSGIIYTLNQLANEGHVYAEEEQLVQAA
LELLEADEAPIREALNNMVQTDDLKLEDEAIYLPPFYFAEVGTTNRLQALLRESEQNLFAKKVDVQALSKETGIEYDEVQ
LQAIEEAIRSKVMVLTGGPGTGKTTTTQGIIAALKHMGLRILLAAPTGRAAKRMSEATGMESKTIHRLLEFNPKDGYKRN
DENPLEGDALIVDECSMIDIILMNNLMKAIPSSMRVVFVGDIDQLPSVGAGNVLRDIIESEKIPVIRLTRIFRQAQTSRI
VMSAHAINQGRFPDTSNGKQTDFFFIQQEEPEKVAEEIVNLVKNRLPKAYSQGVSNIQVLTPMQRGVVGAANLNMALQNA
LNPSQIALNRGGYSFRQGDRVMQLRNNYDKDVFNGDLGYVESVDMEERTLLVNFEERQVEYEASELDELTLAYATTIHKS
QGSEYPIVVMPVLMTHYVMLQRNLVYTGITRAKKICVLIGTKKALSFAIRNMSVLKRNTKLKERLNPELAKPTEKKPVEK
KLSKIYPMNEPVLEAAAEPSESYGKKQPTIETK
>Mature_753_residues
MLKLRCVVERITYQNPENGYSVMRVKVKSYDDLVTLVGNLLEVPAGSVLLCEGEWKVDKRYGSQFVCQSWEEVMPATVYG
IEKYLGSGLVKGIGPKFAQLIVRQFGLETIDVIETDIERLYEVPGIGKKRVEKICESWEKQKDIKNVMLFLQGYGVSTAY
AAKIYRQYGKESIDKVKENPYRLADDIWGIGFKTADSIAAKMGYEKNDLRRCKSGIIYTLNQLANEGHVYAEEEQLVQAA
LELLEADEAPIREALNNMVQTDDLKLEDEAIYLPPFYFAEVGTTNRLQALLRESEQNLFAKKVDVQALSKETGIEYDEVQ
LQAIEEAIRSKVMVLTGGPGTGKTTTTQGIIAALKHMGLRILLAAPTGRAAKRMSEATGMESKTIHRLLEFNPKDGYKRN
DENPLEGDALIVDECSMIDIILMNNLMKAIPSSMRVVFVGDIDQLPSVGAGNVLRDIIESEKIPVIRLTRIFRQAQTSRI
VMSAHAINQGRFPDTSNGKQTDFFFIQQEEPEKVAEEIVNLVKNRLPKAYSQGVSNIQVLTPMQRGVVGAANLNMALQNA
LNPSQIALNRGGYSFRQGDRVMQLRNNYDKDVFNGDLGYVESVDMEERTLLVNFEERQVEYEASELDELTLAYATTIHKS
QGSEYPIVVMPVLMTHYVMLQRNLVYTGITRAKKICVLIGTKKALSFAIRNMSVLKRNTKLKERLNPELAKPTEKKPVEK
KLSKIYPMNEPVLEAAAEPSESYGKKQPTIETK

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789182, Length=443, Percent_Identity=30.6997742663657, Blast_Score=140, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 84650; Mature: 84650

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLRCVVERITYQNPENGYSVMRVKVKSYDDLVTLVGNLLEVPAGSVLLCEGEWKVDKR
CCHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCEEHHH
YGSQFVCQSWEEVMPATVYGIEKYLGSGLVKGIGPKFAQLIVRQFGLETIDVIETDIERL
HCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
YEVPGIGKKRVEKICESWEKQKDIKNVMLFLQGYGVSTAYAAKIYRQYGKESIDKVKENP
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHCCC
YRLADDIWGIGFKTADSIAAKMGYEKNDLRRCKSGIIYTLNQLANEGHVYAEEEQLVQAA
HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHH
LELLEADEAPIREALNNMVQTDDLKLEDEAIYLPPFYFAEVGTTNRLQALLRESEQNLFA
HHHHCCCCCHHHHHHHHHHCCCCCEECCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHH
KKVDVQALSKETGIEYDEVQLQAIEEAIRSKVMVLTGGPGTGKTTTTQGIIAALKHMGLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCEE
ILLAAPTGRAAKRMSEATGMESKTIHRLLEFNPKDGYKRNDENPLEGDALIVDECSMIDI
EEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
ILMNNLMKAIPSSMRVVFVGDIDQLPSVGAGNVLRDIIESEKIPVIRLTRIFRQAQTSRI
HHHHHHHHHCCCCCEEEEEECHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VMSAHAINQGRFPDTSNGKQTDFFFIQQEEPEKVAEEIVNLVKNRLPKAYSQGVSNIQVL
HHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEEE
TPMQRGVVGAANLNMALQNALNPSQIALNRGGYSFRQGDRVMQLRNNYDKDVFNGDLGYV
CHHHHCCEEECHHHHHHHHCCCHHHEEEECCCCCHHCCHHHHHHHHCCCCHHCCCCCCCC
ESVDMEERTLLVNFEERQVEYEASELDELTLAYATTIHKSQGSEYPIVVMPVLMTHYVML
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
QRNLVYTGITRAKKICVLIGTKKALSFAIRNMSVLKRNTKLKERLNPELAKPTEKKPVEK
HCCHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
KLSKIYPMNEPVLEAAAEPSESYGKKQPTIETK
HHHHHCCCCCHHHHHHCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MLKLRCVVERITYQNPENGYSVMRVKVKSYDDLVTLVGNLLEVPAGSVLLCEGEWKVDKR
CCHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCEEHHH
YGSQFVCQSWEEVMPATVYGIEKYLGSGLVKGIGPKFAQLIVRQFGLETIDVIETDIERL
HCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
YEVPGIGKKRVEKICESWEKQKDIKNVMLFLQGYGVSTAYAAKIYRQYGKESIDKVKENP
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHCCC
YRLADDIWGIGFKTADSIAAKMGYEKNDLRRCKSGIIYTLNQLANEGHVYAEEEQLVQAA
HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHH
LELLEADEAPIREALNNMVQTDDLKLEDEAIYLPPFYFAEVGTTNRLQALLRESEQNLFA
HHHHCCCCCHHHHHHHHHHCCCCCEECCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHH
KKVDVQALSKETGIEYDEVQLQAIEEAIRSKVMVLTGGPGTGKTTTTQGIIAALKHMGLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCEE
ILLAAPTGRAAKRMSEATGMESKTIHRLLEFNPKDGYKRNDENPLEGDALIVDECSMIDI
EEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
ILMNNLMKAIPSSMRVVFVGDIDQLPSVGAGNVLRDIIESEKIPVIRLTRIFRQAQTSRI
HHHHHHHHHCCCCCEEEEEECHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VMSAHAINQGRFPDTSNGKQTDFFFIQQEEPEKVAEEIVNLVKNRLPKAYSQGVSNIQVL
HHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEEE
TPMQRGVVGAANLNMALQNALNPSQIALNRGGYSFRQGDRVMQLRNNYDKDVFNGDLGYV
CHHHHCCEEECHHHHHHHHCCCHHHEEEECCCCCHHCCHHHHHHHHCCCCHHCCCCCCCC
ESVDMEERTLLVNFEERQVEYEASELDELTLAYATTIHKSQGSEYPIVVMPVLMTHYVML
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
QRNLVYTGITRAKKICVLIGTKKALSFAIRNMSVLKRNTKLKERLNPELAKPTEKKPVEK
HCCHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
KLSKIYPMNEPVLEAAAEPSESYGKKQPTIETK
HHHHHCCCCCHHHHHHCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]