| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005819
Identifier: 150005819
GI number: 150005819
Start: 4150872
End: 4151663
Strand: Reverse
Name: 150005819
Synonym: BVU_3315
Alternate gene names: NA
Gene position: 4151663-4150872 (Counterclockwise)
Preceding gene: 150005820
Following gene: 150005817
Centisome position: 80.41
GC content: 39.77
Gene sequence:
>792_bases ATGGCTAGAGAAGCAAAGAAAGACCCGAGCGAATTAACAGTGGAAGAAAAGCTGAAGGCTTTGTACCAGTTGCAAACCAT GTTGTCTGAAATCGATAAAATTAAGACTCTGAGAGGGGAACTTCCTCTTGAAGTTCAAGACCTTGAAGATGAGGTTGCCG GTTTGAGCACTCGTATCGAGAAAATTAAAGCTGATATCGAGGAATTGAAATCAAACATTGCAACTAAGAAAATTGAAATC GAGACAGCTAAGACTTCTGTTGAAAAATATAAAGCTCAGCAGGATAATGTGCGTAATAATCGTGAATATGATGTGTTGAC AAAGGAGATTGAATTCCAGTCATTGGAAATCGAACTTTGCGAGAAACGCATAAAGGAATATATTGCAGCAGAAAAAGCAA AGAGCGAGGAGATAGAGCACAGTAATCAAGACTTGGATGAAAGAAAGAAGGACTTGGAAGCGAAGAAATCCGAATTGGAA GAAATTGTTTCTGAAACCAAGCAGGAAGAAGAAAAGCTGAGAGAGAAAGCAAAAGTATTGGAGACAACAATCGAACCGCG TCTGTTGCAGGCATTTAAACGTATCCGTAAGAATTCTCGAAATGGATTGGGAATTGTATATGTTCAGCGTGATGCATGTG GTGGTTGTTTTAACAAGATTCCGCCCCAGAAACAGCTTGATATCCGTATGCGTAAGAAAATTATCGTATGTGAATATTGT GGTCGCATCATGATTGACCCTGAATTGGCGGGTGTGATTGCTGAACAGCATTTGGAAACTGTCAAGAGATAA
Upstream 100 bases:
>100_bases AAGAAATATTTTATTCAATCATACAGGAGATGTTTCCGGAGCTGGAAGTCCAGATAACCCGGGTAAATACAAATCCTATT AAATATTTGTAAGAAAAACT
Downstream 100 bases:
>100_bases TATATCTCCTGAAGCAGTATCTTTTTCTTTGTGGAAAAAGAATTTTATCACATTCTAAGCAAGATCTTGTAAGAAGATGT TGCTTAGAATGTTTTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: Zinc Ribbon Domain-Containing Protein; Protein Containing Zinc Ribbon Domain
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MAREAKKDPSELTVEEKLKALYQLQTMLSEIDKIKTLRGELPLEVQDLEDEVAGLSTRIEKIKADIEELKSNIATKKIEI ETAKTSVEKYKAQQDNVRNNREYDVLTKEIEFQSLEIELCEKRIKEYIAAEKAKSEEIEHSNQDLDERKKDLEAKKSELE EIVSETKQEEEKLREKAKVLETTIEPRLLQAFKRIRKNSRNGLGIVYVQRDACGGCFNKIPPQKQLDIRMRKKIIVCEYC GRIMIDPELAGVIAEQHLETVKR
Sequences:
>Translated_263_residues MAREAKKDPSELTVEEKLKALYQLQTMLSEIDKIKTLRGELPLEVQDLEDEVAGLSTRIEKIKADIEELKSNIATKKIEI ETAKTSVEKYKAQQDNVRNNREYDVLTKEIEFQSLEIELCEKRIKEYIAAEKAKSEEIEHSNQDLDERKKDLEAKKSELE EIVSETKQEEEKLREKAKVLETTIEPRLLQAFKRIRKNSRNGLGIVYVQRDACGGCFNKIPPQKQLDIRMRKKIIVCEYC GRIMIDPELAGVIAEQHLETVKR >Mature_262_residues AREAKKDPSELTVEEKLKALYQLQTMLSEIDKIKTLRGELPLEVQDLEDEVAGLSTRIEKIKADIEELKSNIATKKIEIE TAKTSVEKYKAQQDNVRNNREYDVLTKEIEFQSLEIELCEKRIKEYIAAEKAKSEEIEHSNQDLDERKKDLEAKKSELEE IVSETKQEEEKLREKAKVLETTIEPRLLQAFKRIRKNSRNGLGIVYVQRDACGGCFNKIPPQKQLDIRMRKKIIVCEYCG RIMIDPELAGVIAEQHLETVKR
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30516; Mature: 30385
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREAKKDPSELTVEEKLKALYQLQTMLSEIDKIKTLRGELPLEVQDLEDEVAGLSTRIE CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KIKADIEELKSNIATKKIEIETAKTSVEKYKAQQDNVRNNREYDVLTKEIEFQSLEIELC HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH EKRIKEYIAAEKAKSEEIEHSNQDLDERKKDLEAKKSELEEIVSETKQEEEKLREKAKVL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETTIEPRLLQAFKRIRKNSRNGLGIVYVQRDACGGCFNKIPPQKQLDIRMRKKIIVCEYC HHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHC GRIMIDPELAGVIAEQHLETVKR CCEEECHHHHHHHHHHHHHHHCC >Mature Secondary Structure AREAKKDPSELTVEEKLKALYQLQTMLSEIDKIKTLRGELPLEVQDLEDEVAGLSTRIE CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KIKADIEELKSNIATKKIEIETAKTSVEKYKAQQDNVRNNREYDVLTKEIEFQSLEIELC HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH EKRIKEYIAAEKAKSEEIEHSNQDLDERKKDLEAKKSELEEIVSETKQEEEKLREKAKVL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETTIEPRLLQAFKRIRKNSRNGLGIVYVQRDACGGCFNKIPPQKQLDIRMRKKIIVCEYC HHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHC GRIMIDPELAGVIAEQHLETVKR CCEEECHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA