| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is serB [H]
Identifier: 150005668
GI number: 150005668
Start: 3976097
End: 3977329
Strand: Reverse
Name: serB [H]
Synonym: BVU_3158
Alternate gene names: 150005668
Gene position: 3977329-3976097 (Counterclockwise)
Preceding gene: 150005671
Following gene: 150005667
Centisome position: 77.03
GC content: 44.04
Gene sequence:
>1233_bases ATGAATAATAATACTGAACTTATTTTAATCAGAATTACCGGTCTTGACCGGCCGGGATTAACCGCTTCCATTACGGAAAT TTTGTCAAAATATGATGTTACCATTTTGGATATTGGCCAGGCCGATATTCATAGCACCCTGTCATTAGGCATTTTATTCA AAAGCCAGGAAAAAGATTCAGGGAATATCATGAAAGAGTTGCTATTTAAAGCTTCCGCATTAGGCATCAATATCCGTTTC TATCCCGTTACTGTGGAAGAATATGAGGAATGGGTAAACATGCAAGGCAAGAACCGGTACATCCTGACTTTACTGGGACG CAAGCTGACAGCCAAACAAATCGCGGCAGTCACAGGAATATTGGCGGAACAAGGTTTGAATATTGATGCTATCAAACGTC TTACAGGGCGTATTCCATTGGATGAACGAAAAGCGAATGTACGGGCTTGTATCGAATTCTCCGTCCGTGGCACCCCCCGC CAAAGGGAAGAGATGCAACAGGCGTTAATGAAACTGAGCAGTGACCTGGAAATGGACTTTTCTTTCCAGCTGGACAATAT GTACCGGCGTATGCGACGCTTGATTTGTTTTGATATGGATTCCACATTGATACAGACAGAGTGTATAGATGAATTAGCCG AACGCGCCGGTGTGGGTGACCAAGTACGAGAAATCACAGAACGCGCCATGCGTGGAGAAATTGATTTCATAGAAAGCTTC ACAGAACGGGTGGCTTTGCTGAAAGGACTGGATGAAAGCGTAATGAAAGAAATCGCAGAAAACCTTCCCATCACCGAAGG TGTGGAACGTCTGATGTTCGTGTTGAAAAGATATGGTTACAAAATAGCCATCCTATCCGGTGGATTCACCTATTTCGGCA ATTATCTGAAAGATAAATTCGGCATAGATTACGTATATGCCAATGAACTGGAAATAGTAAATGGCAAATTAACCGGAAGA TATCTGGGAGATGTAGTTGACGGAAAACGTAAAGCCGAACTGCTGAAACTGATCGCTCAAGTAGAACGTGTGGACATAGC ACAAACTATTGCTGTAGGAGACGGAGCGAATGACTTGCCCATGTTGTCCGAAGCCGGTTTGGGTATAGCATTCCATGCAA AACCCAAAGTAGTGGCTAACGCACAACAGTCCATTAATACGATCGGATTGGACGGCGTCCTCTATTTCCTGGGCTTCAAG GACTCTTACCTGGAAGAACGCGGCAAACTCTAA
Upstream 100 bases:
>100_bases ATAAAATCGTCCTTTTCATCGAGAAAAAAGAATGCAGAAAATATAGCTGATAAGGATTTATTTACGTACTTTTGCAATCT GTAAATAGCAACCACAAAGT
Downstream 100 bases:
>100_bases AGAAAGAAGTAACTATATATATGAAATTTTCAGAACTAAATTTAGAAGAAGGGGTGCTTCAGGCATTAGATGCCATGAGA TTTGAAGAATGCACTCCTGT
Product: putative phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MNNNTELILIRITGLDRPGLTASITEILSKYDVTILDIGQADIHSTLSLGILFKSQEKDSGNIMKELLFKASALGINIRF YPVTVEEYEEWVNMQGKNRYILTLLGRKLTAKQIAAVTGILAEQGLNIDAIKRLTGRIPLDERKANVRACIEFSVRGTPR QREEMQQALMKLSSDLEMDFSFQLDNMYRRMRRLICFDMDSTLIQTECIDELAERAGVGDQVREITERAMRGEIDFIESF TERVALLKGLDESVMKEIAENLPITEGVERLMFVLKRYGYKIAILSGGFTYFGNYLKDKFGIDYVYANELEIVNGKLTGR YLGDVVDGKRKAELLKLIAQVERVDIAQTIAVGDGANDLPMLSEAGLGIAFHAKPKVVANAQQSINTIGLDGVLYFLGFK DSYLEERGKL
Sequences:
>Translated_410_residues MNNNTELILIRITGLDRPGLTASITEILSKYDVTILDIGQADIHSTLSLGILFKSQEKDSGNIMKELLFKASALGINIRF YPVTVEEYEEWVNMQGKNRYILTLLGRKLTAKQIAAVTGILAEQGLNIDAIKRLTGRIPLDERKANVRACIEFSVRGTPR QREEMQQALMKLSSDLEMDFSFQLDNMYRRMRRLICFDMDSTLIQTECIDELAERAGVGDQVREITERAMRGEIDFIESF TERVALLKGLDESVMKEIAENLPITEGVERLMFVLKRYGYKIAILSGGFTYFGNYLKDKFGIDYVYANELEIVNGKLTGR YLGDVVDGKRKAELLKLIAQVERVDIAQTIAVGDGANDLPMLSEAGLGIAFHAKPKVVANAQQSINTIGLDGVLYFLGFK DSYLEERGKL >Mature_410_residues MNNNTELILIRITGLDRPGLTASITEILSKYDVTILDIGQADIHSTLSLGILFKSQEKDSGNIMKELLFKASALGINIRF YPVTVEEYEEWVNMQGKNRYILTLLGRKLTAKQIAAVTGILAEQGLNIDAIKRLTGRIPLDERKANVRACIEFSVRGTPR QREEMQQALMKLSSDLEMDFSFQLDNMYRRMRRLICFDMDSTLIQTECIDELAERAGVGDQVREITERAMRGEIDFIESF TERVALLKGLDESVMKEIAENLPITEGVERLMFVLKRYGYKIAILSGGFTYFGNYLKDKFGIDYVYANELEIVNGKLTGR YLGDVVDGKRKAELLKLIAQVERVDIAQTIAVGDGANDLPMLSEAGLGIAFHAKPKVVANAQQSINTIGLDGVLYFLGFK DSYLEERGKL
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=185, Percent_Identity=35.1351351351351, Blast_Score=99, Evalue=1e-20, Organism=Escherichia coli, GI1790849, Length=227, Percent_Identity=49.3392070484581, Blast_Score=229, Evalue=3e-61, Organism=Caenorhabditis elegans, GI115534456, Length=184, Percent_Identity=30.9782608695652, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534454, Length=184, Percent_Identity=30.9782608695652, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534458, Length=189, Percent_Identity=31.7460317460317, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321647, Length=317, Percent_Identity=38.1703470031546, Blast_Score=205, Evalue=8e-54, Organism=Drosophila melanogaster, GI24661601, Length=208, Percent_Identity=32.2115384615385, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 46067; Mature: 46067
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNTELILIRITGLDRPGLTASITEILSKYDVTILDIGQADIHSTLSLGILFKSQEKDS CCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHEEEEEEECCCCCC GNIMKELLFKASALGINIRFYPVTVEEYEEWVNMQGKNRYILTLLGRKLTAKQIAAVTGI HHHHHHHHHHHHHEEEEEEEEEEEHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHH LAEQGLNIDAIKRLTGRIPLDERKANVRACIEFSVRGTPRQREEMQQALMKLSSDLEMDF HHHCCCCHHHHHHHHCCCCCCHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEE SFQLDNMYRRMRRLICFDMDSTLIQTECIDELAERAGVGDQVREITERAMRGEIDFIESF EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH TERVALLKGLDESVMKEIAENLPITEGVERLMFVLKRYGYKIAILSGGFTYFGNYLKDKF HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH GIDYVYANELEIVNGKLTGRYLGDVVDGKRKAELLKLIAQVERVDIAQTIAVGDGANDLP CCCEEEECCEEEECCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC MLSEAGLGIAFHAKPKVVANAQQSINTIGLDGVLYFLGFKDSYLEERGKL CHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHEEECCCHHHHHHCCCC >Mature Secondary Structure MNNNTELILIRITGLDRPGLTASITEILSKYDVTILDIGQADIHSTLSLGILFKSQEKDS CCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHEEEEEEECCCCCC GNIMKELLFKASALGINIRFYPVTVEEYEEWVNMQGKNRYILTLLGRKLTAKQIAAVTGI HHHHHHHHHHHHHEEEEEEEEEEEHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHH LAEQGLNIDAIKRLTGRIPLDERKANVRACIEFSVRGTPRQREEMQQALMKLSSDLEMDF HHHCCCCHHHHHHHHCCCCCCHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEE SFQLDNMYRRMRRLICFDMDSTLIQTECIDELAERAGVGDQVREITERAMRGEIDFIESF EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH TERVALLKGLDESVMKEIAENLPITEGVERLMFVLKRYGYKIAILSGGFTYFGNYLKDKF HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH GIDYVYANELEIVNGKLTGRYLGDVVDGKRKAELLKLIAQVERVDIAQTIAVGDGANDLP CCCEEEECCEEEECCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC MLSEAGLGIAFHAKPKVVANAQQSINTIGLDGVLYFLGFKDSYLEERGKL CHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHEEECCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA