| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is cshA [H]
Identifier: 150005667
GI number: 150005667
Start: 3974799
End: 3976076
Strand: Reverse
Name: cshA [H]
Synonym: BVU_3157
Alternate gene names: 150005667
Gene position: 3976076-3974799 (Counterclockwise)
Preceding gene: 150005668
Following gene: 150005663
Centisome position: 77.01
GC content: 44.13
Gene sequence:
>1278_bases ATGAAATTTTCAGAACTAAATTTAGAAGAAGGGGTGCTTCAGGCATTAGATGCCATGAGATTTGAAGAATGCACTCCTGT ACAAGAACATACCATACCGGTCATTCTTGAAGGAAAAGATTTGATCGGAGTGGCACAGACCGGAACCGGCAAGACTGCCG CATACCTTTTGCCCGTTCTTAATCAATTAAGCAAAGGCGGATATCCGGAAGATGCCATCAATTGTGTGATCATGTCACCC ACACGCGAATTAGCGCAACAGATAGACCAGCAAATGGAAGGTTTCTCTTATTTTCTACCGGCATCCAGCGTGGCTGTTTA CGGAGGAAACGATGGTGTGCGCTTCGAGCAAGAAAAGAAAGGTTTAACTTTGGGGGCCGATGTAGTCATTGCTACTCCGG GACGTCTGATAAGTCATCTCAGCCTAGGTTACGTAGACTTGTCTAAAGTTTCTTTCTTTATTCTTGATGAAGCGGACCGT ATGCTGGATATGGGATTCTCGGATGACATTATGCAAATAGTGAAATATCTGCCGAAAGAACGTCAGACCATCATGTTCTC GGCCACTATGCCGGCTAAAATACAACAATTGGCAAAAACGATCTTAAACAATCCGGTAGAAATAAAATTAGCGGTTTCAA AACCTGCGGAAAAGATTATCCAAACGGCTTATATCTGTTATGAACGCCAGAAATTGGGAATTATTCAATCCCTTTTCCAG GATCAAACACCCGAACGTGTCATTATCTTTGCCTCTTCCAAATTGAAAGTAAAGGAGGTGACACAAGCATTCAAGCGGAT GAAACTGAACGTAGGTGAAATGCACTCAGACTTGGAGCAGTCCCAACGGGAACAGATTATGCGTGAATTTAAAAGTGGCA GAATCAATATTCTGATTGCTACCGATATTGTTTCGCGAGGAATAGACATTGACGATATTCGTTTGGTAATCAACTACGAT GTTCCACATGACAGCGAGGATTATGTACACCGCATCGGCCGTACAGCTCGTGCCAACCATGATGGTTGCGCCATTACTTT TGTCAGTGAGAAAGAGCAGACCCAATTCAAAGCTATTGAAAATTTCCTGGGTAGGAACATCTATAAAATCCCGGTTCCCG AGGAATTGGGAGAAGCGCCCGAATACAACCCGCGAAGTGGCGCCGGTCGTAGCAATCACAAAGGTGGCGGCTCCAGAAAA CAAGGCAATTATAAGGGGAAAAAGAACGGTACGGGCAAGCCCAATGCCAATAATAGAAGAAACACCCCAAAAGAATAG
Upstream 100 bases:
>100_bases TTAATACGATCGGATTGGACGGCGTCCTCTATTTCCTGGGCTTCAAGGACTCTTACCTGGAAGAACGCGGCAAACTCTAA AGAAAGAAGTAACTATATAT
Downstream 100 bases:
>100_bases ACGGAAGAGATGATATCTAAAAACCATTGGAGGAAGACGGACTTGTTTTCCTCCAATTTTATTTTATGGAGAGGGTCACT TCATGGCTCATCTGCAAAAT
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKFSELNLEEGVLQALDAMRFEECTPVQEHTIPVILEGKDLIGVAQTGTGKTAAYLLPVLNQLSKGGYPEDAINCVIMSP TRELAQQIDQQMEGFSYFLPASSVAVYGGNDGVRFEQEKKGLTLGADVVIATPGRLISHLSLGYVDLSKVSFFILDEADR MLDMGFSDDIMQIVKYLPKERQTIMFSATMPAKIQQLAKTILNNPVEIKLAVSKPAEKIIQTAYICYERQKLGIIQSLFQ DQTPERVIIFASSKLKVKEVTQAFKRMKLNVGEMHSDLEQSQREQIMREFKSGRINILIATDIVSRGIDIDDIRLVINYD VPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKAIENFLGRNIYKIPVPEELGEAPEYNPRSGAGRSNHKGGGSRK QGNYKGKKNGTGKPNANNRRNTPKE
Sequences:
>Translated_425_residues MKFSELNLEEGVLQALDAMRFEECTPVQEHTIPVILEGKDLIGVAQTGTGKTAAYLLPVLNQLSKGGYPEDAINCVIMSP TRELAQQIDQQMEGFSYFLPASSVAVYGGNDGVRFEQEKKGLTLGADVVIATPGRLISHLSLGYVDLSKVSFFILDEADR MLDMGFSDDIMQIVKYLPKERQTIMFSATMPAKIQQLAKTILNNPVEIKLAVSKPAEKIIQTAYICYERQKLGIIQSLFQ DQTPERVIIFASSKLKVKEVTQAFKRMKLNVGEMHSDLEQSQREQIMREFKSGRINILIATDIVSRGIDIDDIRLVINYD VPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKAIENFLGRNIYKIPVPEELGEAPEYNPRSGAGRSNHKGGGSRK QGNYKGKKNGTGKPNANNRRNTPKE >Mature_425_residues MKFSELNLEEGVLQALDAMRFEECTPVQEHTIPVILEGKDLIGVAQTGTGKTAAYLLPVLNQLSKGGYPEDAINCVIMSP TRELAQQIDQQMEGFSYFLPASSVAVYGGNDGVRFEQEKKGLTLGADVVIATPGRLISHLSLGYVDLSKVSFFILDEADR MLDMGFSDDIMQIVKYLPKERQTIMFSATMPAKIQQLAKTILNNPVEIKLAVSKPAEKIIQTAYICYERQKLGIIQSLFQ DQTPERVIIFASSKLKVKEVTQAFKRMKLNVGEMHSDLEQSQREQIMREFKSGRINILIATDIVSRGIDIDDIRLVINYD VPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKAIENFLGRNIYKIPVPEELGEAPEYNPRSGAGRSNHKGGGSRK QGNYKGKKNGTGKPNANNRRNTPKE
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=39.2655367231638, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=39.2655367231638, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI4758138, Length=356, Percent_Identity=38.2022471910112, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI41327771, Length=422, Percent_Identity=35.3080568720379, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=37.4647887323944, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=37.4647887323944, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI222352149, Length=377, Percent_Identity=38.9920424403183, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI224593278, Length=364, Percent_Identity=36.5384615384615, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI20149629, Length=378, Percent_Identity=34.6560846560847, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI301171467, Length=425, Percent_Identity=33.6470588235294, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=35.8490566037736, Blast_Score=234, Evalue=8e-62, Organism=Homo sapiens, GI169881239, Length=419, Percent_Identity=34.3675417661098, Blast_Score=234, Evalue=8e-62, Organism=Homo sapiens, GI13514809, Length=419, Percent_Identity=34.3675417661098, Blast_Score=234, Evalue=8e-62, Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=35.8490566037736, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI41327773, Length=348, Percent_Identity=37.6436781609195, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=34.5403899721448, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=34.5403899721448, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=34.5403899721448, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=34.5403899721448, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=35.2150537634409, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI83700235, Length=375, Percent_Identity=35.4666666666667, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=32.972972972973, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI7661920, Length=372, Percent_Identity=32.258064516129, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=36.1256544502618, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI41327776, Length=375, Percent_Identity=34.6666666666667, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI55749865, Length=363, Percent_Identity=35.8126721763085, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI13514831, Length=384, Percent_Identity=33.8541666666667, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI21071032, Length=363, Percent_Identity=36.6391184573003, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI51094101, Length=372, Percent_Identity=32.7956989247312, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI164419743, Length=372, Percent_Identity=32.7956989247312, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=33.6760925449871, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI13129006, Length=388, Percent_Identity=32.4742268041237, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI188035877, Length=363, Percent_Identity=32.7823691460055, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI41327779, Length=390, Percent_Identity=32.5641025641026, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI38327634, Length=356, Percent_Identity=32.0224719101124, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI38569505, Length=387, Percent_Identity=31.0077519379845, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI38569503, Length=387, Percent_Identity=31.0077519379845, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI6005743, Length=362, Percent_Identity=31.2154696132597, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI8922886, Length=362, Percent_Identity=30.939226519337, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI21040371, Length=379, Percent_Identity=29.5514511873351, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI4758112, Length=379, Percent_Identity=29.8153034300792, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI18375623, Length=379, Percent_Identity=29.8153034300792, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI9506931, Length=410, Percent_Identity=29.0243902439024, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=28.537170263789, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI62241022, Length=346, Percent_Identity=30.635838150289, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI164419732, Length=366, Percent_Identity=30.0546448087432, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI62241024, Length=324, Percent_Identity=30.8641975308642, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI256223453, Length=389, Percent_Identity=29.0488431876607, Blast_Score=161, Evalue=9e-40, Organism=Homo sapiens, GI154759257, Length=404, Percent_Identity=29.7029702970297, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI9966805, Length=332, Percent_Identity=28.6144578313253, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI256773275, Length=385, Percent_Identity=30.1298701298701, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI4826686, Length=379, Percent_Identity=26.3852242744063, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI20336298, Length=366, Percent_Identity=27.8688524590164, Blast_Score=125, Evalue=6e-29, Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=39.0374331550802, Blast_Score=280, Evalue=1e-76, Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=37.3684210526316, Blast_Score=269, Evalue=3e-73, Organism=Escherichia coli, GI1787605, Length=362, Percent_Identity=35.9116022099448, Blast_Score=248, Evalue=6e-67, Organism=Escherichia coli, GI1790214, Length=390, Percent_Identity=36.1538461538462, Blast_Score=244, Evalue=7e-66, Organism=Escherichia coli, GI1788930, Length=373, Percent_Identity=33.7801608579088, Blast_Score=206, Evalue=3e-54, Organism=Escherichia coli, GI48994977, Length=385, Percent_Identity=25.4545454545455, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI32565321, Length=427, Percent_Identity=35.1288056206089, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI115533224, Length=416, Percent_Identity=35.0961538461538, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=34.7708894878706, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17510307, Length=388, Percent_Identity=36.8556701030928, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17510309, Length=388, Percent_Identity=36.8556701030928, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71995514, Length=388, Percent_Identity=36.8556701030928, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71995718, Length=373, Percent_Identity=37.2654155495979, Blast_Score=240, Evalue=8e-64, Organism=Caenorhabditis elegans, GI17552642, Length=359, Percent_Identity=35.6545961002786, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=36.6197183098592, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17555296, Length=368, Percent_Identity=33.4239130434783, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=32.258064516129, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=31.989247311828, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17507879, Length=378, Percent_Identity=37.3015873015873, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=35.2785145888594, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17510559, Length=388, Percent_Identity=32.9896907216495, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI115532548, Length=402, Percent_Identity=32.089552238806, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI115532546, Length=392, Percent_Identity=32.3979591836735, Blast_Score=214, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=31.5217391304348, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=31.5217391304348, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI17507881, Length=385, Percent_Identity=34.2857142857143, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17537549, Length=410, Percent_Identity=34.1463414634146, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17507945, Length=340, Percent_Identity=37.0588235294118, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17509811, Length=389, Percent_Identity=32.3907455012853, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=30.4582210242588, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI71982858, Length=381, Percent_Identity=31.758530183727, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17505370, Length=360, Percent_Identity=32.5, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=30.8571428571429, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=31.2342569269521, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=31.2342569269521, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17536103, Length=402, Percent_Identity=31.0945273631841, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=26.5582655826558, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193208216, Length=410, Percent_Identity=27.5609756097561, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=26.9135802469136, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17508543, Length=390, Percent_Identity=25.3846153846154, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17556951, Length=365, Percent_Identity=27.9452054794521, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=27.4611398963731, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71990816, Length=401, Percent_Identity=28.428927680798, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI32564046, Length=378, Percent_Identity=27.2486772486773, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71982862, Length=207, Percent_Identity=35.2657004830918, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI71997889, Length=460, Percent_Identity=26.5217391304348, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI25148205, Length=336, Percent_Identity=25.8928571428571, Blast_Score=110, Evalue=9e-25, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=46.1538461538462, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI25148291, Length=335, Percent_Identity=24.7761194029851, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17557982, Length=418, Percent_Identity=25.8373205741627, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=37.4301675977654, Blast_Score=256, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=38.6058981233244, Blast_Score=252, Evalue=9e-68, Organism=Saccharomyces cerevisiae, GI6324778, Length=430, Percent_Identity=34.6511627906977, Blast_Score=247, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=387, Percent_Identity=38.5012919896641, Blast_Score=246, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=446, Percent_Identity=32.9596412556054, Blast_Score=242, Evalue=8e-65, Organism=Saccharomyces cerevisiae, GI6323021, Length=393, Percent_Identity=34.6055979643766, Blast_Score=230, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=35.5555555555556, Blast_Score=215, Evalue=9e-57, Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=34.1397849462366, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=34.1397849462366, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=380, Percent_Identity=31.5789473684211, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6320173, Length=431, Percent_Identity=31.0904872389791, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=359, Percent_Identity=33.1476323119777, Blast_Score=203, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6324620, Length=375, Percent_Identity=32.2666666666667, Blast_Score=199, Evalue=9e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=367, Percent_Identity=34.0599455040872, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=31.5789473684211, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=32.8840970350404, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=360, Percent_Identity=33.8888888888889, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=30.4232804232804, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6321267, Length=410, Percent_Identity=33.9024390243902, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=390, Percent_Identity=33.5897435897436, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=29.4403892944039, Blast_Score=146, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=26.3414634146341, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=372, Percent_Identity=30.9139784946237, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=438, Percent_Identity=25.1141552511416, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6321374, Length=399, Percent_Identity=24.812030075188, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6323844, Length=351, Percent_Identity=25.0712250712251, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24644483, Length=395, Percent_Identity=36.7088607594937, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI24644479, Length=395, Percent_Identity=36.7088607594937, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI24644487, Length=395, Percent_Identity=36.7088607594937, Blast_Score=264, Evalue=8e-71, Organism=Drosophila melanogaster, GI45551833, Length=395, Percent_Identity=36.7088607594937, Blast_Score=264, Evalue=8e-71, Organism=Drosophila melanogaster, GI24644485, Length=395, Percent_Identity=36.7088607594937, Blast_Score=264, Evalue=8e-71, Organism=Drosophila melanogaster, GI281361218, Length=395, Percent_Identity=36.7088607594937, Blast_Score=264, Evalue=8e-71, Organism=Drosophila melanogaster, GI24644481, Length=395, Percent_Identity=36.7088607594937, Blast_Score=264, Evalue=8e-71, Organism=Drosophila melanogaster, GI28574962, Length=357, Percent_Identity=38.655462184874, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI24584994, Length=423, Percent_Identity=36.8794326241135, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI18857967, Length=435, Percent_Identity=34.7126436781609, Blast_Score=258, Evalue=4e-69, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=37.6, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI21355075, Length=374, Percent_Identity=36.3636363636364, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI24584399, Length=420, Percent_Identity=36.9047619047619, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24585582, Length=424, Percent_Identity=32.7830188679245, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24662330, Length=383, Percent_Identity=35.2480417754569, Blast_Score=239, Evalue=2e-63, Organism=Drosophila melanogaster, GI24642151, Length=361, Percent_Identity=35.4570637119114, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=32.258064516129, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=34.5013477088949, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=34.5013477088949, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=34.5013477088949, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=34.5013477088949, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=35.2617079889807, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17977678, Length=394, Percent_Identity=33.756345177665, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24583279, Length=374, Percent_Identity=31.8181818181818, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24583281, Length=374, Percent_Identity=31.8181818181818, Blast_Score=212, Evalue=3e-55, Organism=Drosophila melanogaster, GI28575014, Length=429, Percent_Identity=30.3030303030303, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=35.8730158730159, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI28571808, Length=341, Percent_Identity=34.3108504398827, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI28571809, Length=341, Percent_Identity=34.3108504398827, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24642822, Length=411, Percent_Identity=29.9270072992701, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI17136814, Length=387, Percent_Identity=31.266149870801, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24643725, Length=398, Percent_Identity=30.1507537688442, Blast_Score=184, Evalue=7e-47, Organism=Drosophila melanogaster, GI24581954, Length=376, Percent_Identity=30.8510638297872, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24581952, Length=376, Percent_Identity=30.8510638297872, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24581956, Length=376, Percent_Identity=30.8510638297872, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24666101, Length=361, Percent_Identity=31.3019390581717, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI21355559, Length=377, Percent_Identity=31.5649867374005, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17647335, Length=366, Percent_Identity=30.327868852459, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI20130173, Length=456, Percent_Identity=27.8508771929825, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI17136666, Length=476, Percent_Identity=27.5210084033613, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24668515, Length=364, Percent_Identity=27.4725274725275, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI18859659, Length=227, Percent_Identity=36.1233480176211, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI28571338, Length=227, Percent_Identity=36.1233480176211, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI19920478, Length=361, Percent_Identity=27.4238227146814, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24640164, Length=382, Percent_Identity=23.2984293193717, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI21358123, Length=371, Percent_Identity=23.7196765498652, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47459; Mature: 47459
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSELNLEEGVLQALDAMRFEECTPVQEHTIPVILEGKDLIGVAQTGTGKTAAYLLPVL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHH NQLSKGGYPEDAINCVIMSPTRELAQQIDQQMEGFSYFLPASSVAVYGGNDGVRFEQEKK HHHHCCCCCHHHCEEEEECCHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEHHHC GLTLGADVVIATPGRLISHLSLGYVDLSKVSFFILDEADRMLDMGFSDDIMQIVKYLPKE CCEECCCEEEECCHHHHHHHHCCCEEHHHEEEEEECCHHHHHHCCCCHHHHHHHHHCCCC RQTIMFSATMPAKIQQLAKTILNNPVEIKLAVSKPAEKIIQTAYICYERQKLGIIQSLFQ CCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH DQTPERVIIFASSKLKVKEVTQAFKRMKLNVGEMHSDLEQSQREQIMREFKSGRINILIA CCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKAIE EHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCHHHCCCCCCEEEEEECCCHHHHHHHHH NFLGRNIYKIPVPEELGEAPEYNPRSGAGRSNHKGGGSRKQGNYKGKKNGTGKPNANNRR HHHCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NTPKE CCCCC >Mature Secondary Structure MKFSELNLEEGVLQALDAMRFEECTPVQEHTIPVILEGKDLIGVAQTGTGKTAAYLLPVL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHH NQLSKGGYPEDAINCVIMSPTRELAQQIDQQMEGFSYFLPASSVAVYGGNDGVRFEQEKK HHHHCCCCCHHHCEEEEECCHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEHHHC GLTLGADVVIATPGRLISHLSLGYVDLSKVSFFILDEADRMLDMGFSDDIMQIVKYLPKE CCEECCCEEEECCHHHHHHHHCCCEEHHHEEEEEECCHHHHHHCCCCHHHHHHHHHCCCC RQTIMFSATMPAKIQQLAKTILNNPVEIKLAVSKPAEKIIQTAYICYERQKLGIIQSLFQ CCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH DQTPERVIIFASSKLKVKEVTQAFKRMKLNVGEMHSDLEQSQREQIMREFKSGRINILIA CCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKAIE EHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCHHHCCCCCCEEEEEECCCHHHHHHHHH NFLGRNIYKIPVPEELGEAPEYNPRSGAGRSNHKGGGSRKQGNYKGKKNGTGKPNANNRR HHHCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NTPKE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA