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The map label for this gene is nrdD [C]

Identifier: 150005617

GI number: 150005617

Start: 3927070

End: 3929163

Strand: Direct

Name: nrdD [C]

Synonym: BVU_3105

Alternate gene names: 150005617

Gene position: 3927070-3929163 (Clockwise)

Preceding gene: 150005608

Following gene: 150005618

Centisome position: 76.06

GC content: 37.92

Gene sequence:

>2094_bases
ATGATTAATTCAGAGGTATTTATTATTAAGAGAGATGGTAAAAAAGAAACTTTCTCTCTTGATAAAATTAAAAATGCAAT
AGCCAAAGCATTTTTGTCAGTAGGAAGTTTTGCTACCCAGGATGTGATTACTACTGTATTGAGTCGCGTTAGTGTCAGTG
ATGGAATGAATGTGGAAGAAATCCAGAATCAGGTGGAGGTGGCCCTGATGGCTGAACATTATTACAGTGTTGCCAAGGCG
TATATGCTGTATCGTCAGAAACATTTGGAGGATCGTGAGGTGAGAGATAAACTGAAGTTTTTGCTTGACTATTGTGACGC
TTCCAATCCGGCAACCGGCAGTAAATATGATGCGAATGCCAATGTGGAGAATAAGAATATTGCTACGCTGATAGGAGAGT
TACCCAAATCAAATTTTATTCGTCTCAACCGTCGTCTGTTGACTGACCGTTTGAAAGACATGTATGGAAAGGAATTGTCC
GATCGTTATTTGGAACTTCTGAATCATCATTTTATTTATAAAAATGATGAAACTAATCTGGCTAATTATTGTGCCAGCAT
TACTATGTATCCTTGGTTGAATAATGGTACGATAGCAGTGGGAGGGAACTCTACGGCTCCTACTAACTTGAAATCTTTTT
GTGGTGGATTTGTCAATATGGTTTTTATTGTATCCAGTATGTTAAGTGGTGCCTGTGCTACTCCAGAGTTTTTGATGTAT
ATGAATTATTTCATTGGTTTGGAATATGGGCAGGAATATTATAAGTATCCCGATAAGATTGTTGATTTATCTACCAAACA
AAGAACAATAGACAAAATCATTACAGACTGTTTCGAGCAAATAGTATATTCTATTAACCAGCCTACAGGGGCGCGTAATT
TTCAAGCCGTCTTTTGGAATGTAGCTTACTATGACAAATATTATTTTGAAAGTCTTTTTGGTAACTTCTTTTTTCCCGAT
GGAAGCCAACCTGACTGGAATTCACTAAGTTGGTTGCAGAAACGTTTCATGAAATGGTTTAATAAAGAGCGTACACGTAC
TGTTTTAACATTTCCTGTAGAAACAATGGCGCTTTTGACTAAAGATGGTGATGTATTAGATAAGGAATATGGTGACTTTA
CGGCTGAAATGTATTCCGAAGGTCATTCTTTCTTTACTTATATGAGTGATAATGCAGATTCTTTAAGTAGTTGCTGCCGT
CTTCGCAATGAGATACAGGACAATGGTTTCAGCTATACTTTGGGAGCAGGTGGGGTTTCTACAGGCTCAAAAAGTGTGCT
GACTATTAATTTGAACCGTTGCATCCAGCATGCGGTGAAATCCGGTATACTTTATCCGTTTTTTTTGGAAGAAGTGGTTG
ATTTGGTACACAAAGTCCAGTTGGCTTATAATGAGAATCTGAAATTGTTGCAGTCGAAAGGTATGCTGCCTTTGTTTGAT
GCTGGTTACATCAATATGAACCGTCAGTATCTAACTATCGGTGTTAATGGTTTGGTGGAAGCAGCGCAATTTATGGGTAT
TGAAATCAATGATAACCCTAAGTATGAAGCATTTGTTCAGGAGATTTTAGGAATGATTGAACGATATAATAGGAAGTACC
GTACAAAGGATGTTTTGTTTAATTGCGAAATGATTCCTGCTGAGAATGTAGGAGTGAAGCACGCTAAATGGGATAAAGAA
GCAGGCTTCCAAACATTCCGAGAATGTTATAACAGTTATTTCTATATTGTAGAAGACAAATCGTTGAATGTTGTCGATAA
ATTCCGTCTGCATGGACGCCGCTATATAAAGCATTTAACGGGAGGCTCGGCCTTGCACATGAATTTGGAAGAACATCTTA
GTAAGGAGCAGTACAGACAACTACTTCGGGTAGCTGCTATAGAAGGCTGTAATTACTTTACATTTAATATACCGAATACC
ATTTGCAATGAATGTAAGCATATTGATAAGAGATACTTGCATGAATGTCCTGAATGTCATAGTCGGAATGTGGATTATCT
GACACGTGTTATCGGGTACATGAAGCGGATCAGTAATTTTTCTCAGGCAAGGCAGAAGGAGGCTGCACAAAGATATTATG
CTCCGTTACGTTGA

Upstream 100 bases:

>100_bases
GAATCATACTGATCCTTTTTATTACTGGTTTCCATGAATTGTCGTGTGTGAAAGACTTATATTGAATAATGTGTGTTTTG
TATAACCTTAATTTATAAGT

Downstream 100 bases:

>100_bases
TTATGACATCGTATTTCAAGAAATTCCGGATGAAGTCACTCTGGCGATCAATCTCTCTAACTGTCCCAATAGGTGCAAGG
GCTGTCATAGCCCTCATTTG

Product: anaerobic ribonucleoside triphosphate reductase

Products: dUTP; H2O; Oxidized thioredoxin [C]

Alternate protein names: Anaerobic Ribonucleoside-Triphosphate Reductase; Anaerobic Ribonucleoside-Triphosphate Reductase Class III; Ribonucleoside-Triphosphate Reductase Anaerobic; Oxygen-Sensitive Ribonucleoside-Triphosphate Reductase

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MINSEVFIIKRDGKKETFSLDKIKNAIAKAFLSVGSFATQDVITTVLSRVSVSDGMNVEEIQNQVEVALMAEHYYSVAKA
YMLYRQKHLEDREVRDKLKFLLDYCDASNPATGSKYDANANVENKNIATLIGELPKSNFIRLNRRLLTDRLKDMYGKELS
DRYLELLNHHFIYKNDETNLANYCASITMYPWLNNGTIAVGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEFLMY
MNYFIGLEYGQEYYKYPDKIVDLSTKQRTIDKIITDCFEQIVYSINQPTGARNFQAVFWNVAYYDKYYFESLFGNFFFPD
GSQPDWNSLSWLQKRFMKWFNKERTRTVLTFPVETMALLTKDGDVLDKEYGDFTAEMYSEGHSFFTYMSDNADSLSSCCR
LRNEIQDNGFSYTLGAGGVSTGSKSVLTINLNRCIQHAVKSGILYPFFLEEVVDLVHKVQLAYNENLKLLQSKGMLPLFD
AGYINMNRQYLTIGVNGLVEAAQFMGIEINDNPKYEAFVQEILGMIERYNRKYRTKDVLFNCEMIPAENVGVKHAKWDKE
AGFQTFRECYNSYFYIVEDKSLNVVDKFRLHGRRYIKHLTGGSALHMNLEEHLSKEQYRQLLRVAAIEGCNYFTFNIPNT
ICNECKHIDKRYLHECPECHSRNVDYLTRVIGYMKRISNFSQARQKEAAQRYYAPLR

Sequences:

>Translated_697_residues
MINSEVFIIKRDGKKETFSLDKIKNAIAKAFLSVGSFATQDVITTVLSRVSVSDGMNVEEIQNQVEVALMAEHYYSVAKA
YMLYRQKHLEDREVRDKLKFLLDYCDASNPATGSKYDANANVENKNIATLIGELPKSNFIRLNRRLLTDRLKDMYGKELS
DRYLELLNHHFIYKNDETNLANYCASITMYPWLNNGTIAVGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEFLMY
MNYFIGLEYGQEYYKYPDKIVDLSTKQRTIDKIITDCFEQIVYSINQPTGARNFQAVFWNVAYYDKYYFESLFGNFFFPD
GSQPDWNSLSWLQKRFMKWFNKERTRTVLTFPVETMALLTKDGDVLDKEYGDFTAEMYSEGHSFFTYMSDNADSLSSCCR
LRNEIQDNGFSYTLGAGGVSTGSKSVLTINLNRCIQHAVKSGILYPFFLEEVVDLVHKVQLAYNENLKLLQSKGMLPLFD
AGYINMNRQYLTIGVNGLVEAAQFMGIEINDNPKYEAFVQEILGMIERYNRKYRTKDVLFNCEMIPAENVGVKHAKWDKE
AGFQTFRECYNSYFYIVEDKSLNVVDKFRLHGRRYIKHLTGGSALHMNLEEHLSKEQYRQLLRVAAIEGCNYFTFNIPNT
ICNECKHIDKRYLHECPECHSRNVDYLTRVIGYMKRISNFSQARQKEAAQRYYAPLR
>Mature_697_residues
MINSEVFIIKRDGKKETFSLDKIKNAIAKAFLSVGSFATQDVITTVLSRVSVSDGMNVEEIQNQVEVALMAEHYYSVAKA
YMLYRQKHLEDREVRDKLKFLLDYCDASNPATGSKYDANANVENKNIATLIGELPKSNFIRLNRRLLTDRLKDMYGKELS
DRYLELLNHHFIYKNDETNLANYCASITMYPWLNNGTIAVGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEFLMY
MNYFIGLEYGQEYYKYPDKIVDLSTKQRTIDKIITDCFEQIVYSINQPTGARNFQAVFWNVAYYDKYYFESLFGNFFFPD
GSQPDWNSLSWLQKRFMKWFNKERTRTVLTFPVETMALLTKDGDVLDKEYGDFTAEMYSEGHSFFTYMSDNADSLSSCCR
LRNEIQDNGFSYTLGAGGVSTGSKSVLTINLNRCIQHAVKSGILYPFFLEEVVDLVHKVQLAYNENLKLLQSKGMLPLFD
AGYINMNRQYLTIGVNGLVEAAQFMGIEINDNPKYEAFVQEILGMIERYNRKYRTKDVLFNCEMIPAENVGVKHAKWDKE
AGFQTFRECYNSYFYIVEDKSLNVVDKFRLHGRRYIKHLTGGSALHMNLEEHLSKEQYRQLLRVAAIEGCNYFTFNIPNT
ICNECKHIDKRYLHECPECHSRNVDYLTRVIGYMKRISNFSQARQKEAAQRYYAPLR

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.17.4.2 [C]

Molecular weight: Translated: 80522; Mature: 80522

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSEVFIIKRDGKKETFSLDKIKNAIAKAFLSVGSFATQDVITTVLSRVSVSDGMNVEE
CCCCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH
IQNQVEVALMAEHYYSVAKAYMLYRQKHLEDREVRDKLKFLLDYCDASNPATGSKYDANA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NVENKNIATLIGELPKSNFIRLNRRLLTDRLKDMYGKELSDRYLELLNHHFIYKNDETNL
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCH
ANYCASITMYPWLNNGTIAVGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEFLMY
HHHHHHHEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
MNYFIGLEYGQEYYKYPDKIVDLSTKQRTIDKIITDCFEQIVYSINQPTGARNFQAVFWN
HHHHHHHHHCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEE
VAYYDKYYFESLFGNFFFPDGSQPDWNSLSWLQKRFMKWFNKERTRTVLTFPVETMALLT
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH
KDGDVLDKEYGDFTAEMYSEGHSFFTYMSDNADSLSSCCRLRNEIQDNGFSYTLGAGGVS
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
TGSKSVLTINLNRCIQHAVKSGILYPFFLEEVVDLVHKVQLAYNENLKLLQSKGMLPLFD
CCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEC
AGYINMNRQYLTIGVNGLVEAAQFMGIEINDNPKYEAFVQEILGMIERYNRKYRTKDVLF
CCEEECCCEEEEEEHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHEE
NCEMIPAENVGVKHAKWDKEAGFQTFRECYNSYFYIVEDKSLNVVDKFRLHGRRYIKHLT
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHC
GGSALHMNLEEHLSKEQYRQLLRVAAIEGCNYFTFNIPNTICNECKHIDKRYLHECPECH
CCCEEEECHHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCHHHH
SRNVDYLTRVIGYMKRISNFSQARQKEAAQRYYAPLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MINSEVFIIKRDGKKETFSLDKIKNAIAKAFLSVGSFATQDVITTVLSRVSVSDGMNVEE
CCCCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH
IQNQVEVALMAEHYYSVAKAYMLYRQKHLEDREVRDKLKFLLDYCDASNPATGSKYDANA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NVENKNIATLIGELPKSNFIRLNRRLLTDRLKDMYGKELSDRYLELLNHHFIYKNDETNL
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCH
ANYCASITMYPWLNNGTIAVGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEFLMY
HHHHHHHEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
MNYFIGLEYGQEYYKYPDKIVDLSTKQRTIDKIITDCFEQIVYSINQPTGARNFQAVFWN
HHHHHHHHHCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEE
VAYYDKYYFESLFGNFFFPDGSQPDWNSLSWLQKRFMKWFNKERTRTVLTFPVETMALLT
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH
KDGDVLDKEYGDFTAEMYSEGHSFFTYMSDNADSLSSCCRLRNEIQDNGFSYTLGAGGVS
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
TGSKSVLTINLNRCIQHAVKSGILYPFFLEEVVDLVHKVQLAYNENLKLLQSKGMLPLFD
CCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEC
AGYINMNRQYLTIGVNGLVEAAQFMGIEINDNPKYEAFVQEILGMIERYNRKYRTKDVLF
CCEEECCCEEEEEEHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHEE
NCEMIPAENVGVKHAKWDKEAGFQTFRECYNSYFYIVEDKSLNVVDKFRLHGRRYIKHLT
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHC
GGSALHMNLEEHLSKEQYRQLLRVAAIEGCNYFTFNIPNTICNECKHIDKRYLHECPECH
CCCEEEECHHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCHHHH
SRNVDYLTRVIGYMKRISNFSQARQKEAAQRYYAPLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Ca2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced thioredoxin; UTP [C]

Specific reaction: Reduced thioredoxin + UTP --> dUTP + H2O + Oxidized thioredoxin [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA