| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005603
Identifier: 150005603
GI number: 150005603
Start: 3907873
End: 3909030
Strand: Reverse
Name: 150005603
Synonym: BVU_3091
Alternate gene names: NA
Gene position: 3909030-3907873 (Counterclockwise)
Preceding gene: 150005604
Following gene: 150005599
Centisome position: 75.71
GC content: 45.42
Gene sequence:
>1158_bases ATGACCTCTAAAACCAGACTTGTCTATCTGCTCATAACAACTTTCTGCCTGGCAGGTTGCGGCTATAAAAGCCGCAACCC GGTGAGTGAAAACGGGCTACCTTCCGCAGATACCATACAAACAGCCCTGGCCCCCCGTTATGCCAAAGGCTTCAAAATAA CTGTTCGTCCGGATGGAGTAAAGCTTCTGTCCATCTCGGAGCCGAACAATAACCATGCAATACCCGAACTTTTCGCCTTA GTTCCTAAAGGAACAAAAGCCGAGATACCCGATGGCTATACCGTTATTCCGACTCCGACAGACAGAGTGATCTGCATGAC CACGCCGCAACTGGCAGGTTTTACCGGTCTGAACGCTTATGACAAAGTGGTAGCGACAAGTACCACCCGCCGGATGCAGA ATAAGGAATGGCTTGCCCGATTAAAAGACGGACGGGTGAAAAAGATAGGAATGGAAGGAAACTTTGATACGGAAATTATC ATTGCATCCCAACCCGATATCATTTTCGTATCTCCCAACCGCCGGGGAGGGTATGAAGTGATGAAAGAGCTGAACATCCC TCTGGTCCCCTATTGGGCATTCAAGGAAACATCACCATTGGGGCTGTCCGAATGGATCAAGGTAGCAGGTATGTTTATCG GTAAAGAGGAAGAGGCATGCCAATTATTTGCACAAATGGAACAACGCTATAACCTGTTGAAAGCCAAAGTTTCCAATGTA AAACAGCGTCCCAGTGTATTCAGTGGAGAAATGAGAAGAGATACCTGGTATGTACCCGGAGGACAAAGTTTCTATGCCCG CTTGTTCGCCGACGCAGGGGCCGATTACTTTATGAAGGATAATCCTGAAACAGGAGGTGTACTCATGGATTTTGAAACCG TATACGCCAAAGGATATAATGCCGGCTACTGGAGAGTGATGAATGGTTATAAAGGAGAATTCTCTTATGAAGCATTAAAA GCTTCCAATCCACAATATGCTGATTTCCGGGCTTTTAAAGAAAAGAAGGTTATTTATTGCAATCTGGAATGGATACCTTT GTATGAGAATCTTCCCCTCTCACCCGATGTTCTTCTGAGTGACATGATAAAAGCTTTTCACCCGGAACTACTTCCCGATT ATCATCCTGTGTTTTATTCGCTTCTGGAAAAAGAATAA
Upstream 100 bases:
>100_bases GATGACCGTCCTTATAACAGTAATTATGCAACTCTGACACCGGGACGCTCTTTCTATGTCAGTCTGCTGGTTCGTTTCAA GCAATAAAACTATTTTTAGC
Downstream 100 bases:
>100_bases GTATTCCAGTTCTCATGCTTATGGTAACAAACAGTTTTAATCCGGCTTATCTATTTCACTATTACAAAAATGGCTGAAGT CTCGGACTTCAGCCATTCCG
Product: putative exported periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTSKTRLVYLLITTFCLAGCGYKSRNPVSENGLPSADTIQTALAPRYAKGFKITVRPDGVKLLSISEPNNNHAIPELFAL VPKGTKAEIPDGYTVIPTPTDRVICMTTPQLAGFTGLNAYDKVVATSTTRRMQNKEWLARLKDGRVKKIGMEGNFDTEII IASQPDIIFVSPNRRGGYEVMKELNIPLVPYWAFKETSPLGLSEWIKVAGMFIGKEEEACQLFAQMEQRYNLLKAKVSNV KQRPSVFSGEMRRDTWYVPGGQSFYARLFADAGADYFMKDNPETGGVLMDFETVYAKGYNAGYWRVMNGYKGEFSYEALK ASNPQYADFRAFKEKKVIYCNLEWIPLYENLPLSPDVLLSDMIKAFHPELLPDYHPVFYSLLEKE
Sequences:
>Translated_385_residues MTSKTRLVYLLITTFCLAGCGYKSRNPVSENGLPSADTIQTALAPRYAKGFKITVRPDGVKLLSISEPNNNHAIPELFAL VPKGTKAEIPDGYTVIPTPTDRVICMTTPQLAGFTGLNAYDKVVATSTTRRMQNKEWLARLKDGRVKKIGMEGNFDTEII IASQPDIIFVSPNRRGGYEVMKELNIPLVPYWAFKETSPLGLSEWIKVAGMFIGKEEEACQLFAQMEQRYNLLKAKVSNV KQRPSVFSGEMRRDTWYVPGGQSFYARLFADAGADYFMKDNPETGGVLMDFETVYAKGYNAGYWRVMNGYKGEFSYEALK ASNPQYADFRAFKEKKVIYCNLEWIPLYENLPLSPDVLLSDMIKAFHPELLPDYHPVFYSLLEKE >Mature_384_residues TSKTRLVYLLITTFCLAGCGYKSRNPVSENGLPSADTIQTALAPRYAKGFKITVRPDGVKLLSISEPNNNHAIPELFALV PKGTKAEIPDGYTVIPTPTDRVICMTTPQLAGFTGLNAYDKVVATSTTRRMQNKEWLARLKDGRVKKIGMEGNFDTEIII ASQPDIIFVSPNRRGGYEVMKELNIPLVPYWAFKETSPLGLSEWIKVAGMFIGKEEEACQLFAQMEQRYNLLKAKVSNVK QRPSVFSGEMRRDTWYVPGGQSFYARLFADAGADYFMKDNPETGGVLMDFETVYAKGYNAGYWRVMNGYKGEFSYEALKA SNPQYADFRAFKEKKVIYCNLEWIPLYENLPLSPDVLLSDMIKAFHPELLPDYHPVFYSLLEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 43492; Mature: 43360
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKTRLVYLLITTFCLAGCGYKSRNPVSENGLPSADTIQTALAPRYAKGFKITVRPDGV CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCEEEECCCCE KLLSISEPNNNHAIPELFALVPKGTKAEIPDGYTVIPTPTDRVICMTTPQLAGFTGLNAY EEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCHH DKVVATSTTRRMQNKEWLARLKDGRVKKIGMEGNFDTEIIIASQPDIIFVSPNRRGGYEV HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCHHHH MKELNIPLVPYWAFKETSPLGLSEWIKVAGMFIGKEEEACQLFAQMEQRYNLLKAKVSNV HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KQRPSVFSGEMRRDTWYVPGGQSFYARLFADAGADYFMKDNPETGGVLMDFETVYAKGYN HHCCCHHCCCCCCCEEECCCCHHHHHHHHHHCCCCCEECCCCCCCCEEEEEHHHHHCCCC AGYWRVMNGYKGEFSYEALKASNPQYADFRAFKEKKVIYCNLEWIPLYENLPLSPDVLLS CCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHH DMIKAFHPELLPDYHPVFYSLLEKE HHHHHHCHHHCCCHHHHHHHHHHCC >Mature Secondary Structure TSKTRLVYLLITTFCLAGCGYKSRNPVSENGLPSADTIQTALAPRYAKGFKITVRPDGV CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCEEEECCCCE KLLSISEPNNNHAIPELFALVPKGTKAEIPDGYTVIPTPTDRVICMTTPQLAGFTGLNAY EEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCHH DKVVATSTTRRMQNKEWLARLKDGRVKKIGMEGNFDTEIIIASQPDIIFVSPNRRGGYEV HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCHHHH MKELNIPLVPYWAFKETSPLGLSEWIKVAGMFIGKEEEACQLFAQMEQRYNLLKAKVSNV HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KQRPSVFSGEMRRDTWYVPGGQSFYARLFADAGADYFMKDNPETGGVLMDFETVYAKGYN HHCCCHHCCCCCCCEEECCCCHHHHHHHHHHCCCCCEECCCCCCCCEEEEEHHHHHCCCC AGYWRVMNGYKGEFSYEALKASNPQYADFRAFKEKKVIYCNLEWIPLYENLPLSPDVLLS CCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHH DMIKAFHPELLPDYHPVFYSLLEKE HHHHHHCHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]