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The map label for this gene is ysgA [H]

Identifier: 150005579

GI number: 150005579

Start: 3876578

End: 3877333

Strand: Reverse

Name: ysgA [H]

Synonym: BVU_3064

Alternate gene names: 150005579

Gene position: 3877333-3876578 (Counterclockwise)

Preceding gene: 150005583

Following gene: 150005569

Centisome position: 75.1

GC content: 42.2

Gene sequence:

>756_bases
ATGCTGAGCAAAAACAAAATAAAATATATCCGTTCGTTGGAACTGAAAAAAAAACGCAAAGAAGAACAAGTTTTTGTGGC
CGAAGGGCATAAATTGGTAGGCGATTTATTGGGACACTTCCCTTGCAAGTTACTGATTGCCACTTCCAATTGGCTGAAAA
TGAACCACTCTGCCACGGCCAACGAAATTATTGAAGTAACACAAGAAGAGTTGTCACGTGCCAGTCTTCAAAAGACGCCC
CAAGAGGTATTGGCCGTTTTTGTACAACCTTCTTATGATTTAAATCCGGAAGTTATTAAAAGTTCTCTATGCCTGGCGCT
GGACGATGTACAAGACCCAGGGAATCTGGGAACCATTATCCGCTTGGCAGACTGGTTTGGCATTGAACATATCTTCTGCT
CGACAGGAACAGCAGATGTGTATAATCCCAAAACCGTACAGGCAACCATGGGGGCATTGGCAAGAGTAAAAGTTCATTAC
TGTTCTTTACCACAGCTTATTGAAAGCCTGACCGATATTCCTGTATACGGCACCTTTTTAAACGGGAACATTATTTATAC
AGAATCCCTGTCGGCCCATGGATTGATTGTCATGGGAAATGAAGGAAAAGGAGTAAGCCCTGAAGTAGAGAAACTGATAA
ACAAGAAGTTATATATTCCCAATTATCCTCAAGAACGGGAAACCTCCGAATCATTGAATGTGGCAATTGCCACAGCAGTG
GTTTGCTCGGAGTTCAGAAGACGTTTATTGCCTTAA

Upstream 100 bases:

>100_bases
CAAATCCGTAACCTTCGCAAATTTATCTACAAAGATAGATATTAATTGAAAATATCTTCTTAGCTTTGCTCCAAATATTT
GTTATTAAATAGAAATTATC

Downstream 100 bases:

>100_bases
AATTCATATTTCCATCGGTATATGTAACAATTTCTGAATGGGAAATACTATAACGCTACCCTAAGCATATATTATAAACG
TACCAGTCTGCTTCCCGTTG

Product: putative tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLSKNKIKYIRSLELKKKRKEEQVFVAEGHKLVGDLLGHFPCKLLIATSNWLKMNHSATANEIIEVTQEELSRASLQKTP
QEVLAVFVQPSYDLNPEVIKSSLCLALDDVQDPGNLGTIIRLADWFGIEHIFCSTGTADVYNPKTVQATMGALARVKVHY
CSLPQLIESLTDIPVYGTFLNGNIIYTESLSAHGLIVMGNEGKGVSPEVEKLINKKLYIPNYPQERETSESLNVAIATAV
VCSEFRRRLLP

Sequences:

>Translated_251_residues
MLSKNKIKYIRSLELKKKRKEEQVFVAEGHKLVGDLLGHFPCKLLIATSNWLKMNHSATANEIIEVTQEELSRASLQKTP
QEVLAVFVQPSYDLNPEVIKSSLCLALDDVQDPGNLGTIIRLADWFGIEHIFCSTGTADVYNPKTVQATMGALARVKVHY
CSLPQLIESLTDIPVYGTFLNGNIIYTESLSAHGLIVMGNEGKGVSPEVEKLINKKLYIPNYPQERETSESLNVAIATAV
VCSEFRRRLLP
>Mature_251_residues
MLSKNKIKYIRSLELKKKRKEEQVFVAEGHKLVGDLLGHFPCKLLIATSNWLKMNHSATANEIIEVTQEELSRASLQKTP
QEVLAVFVQPSYDLNPEVIKSSLCLALDDVQDPGNLGTIIRLADWFGIEHIFCSTGTADVYNPKTVQATMGALARVKVHY
CSLPQLIESLTDIPVYGTFLNGNIIYTESLSAHGLIVMGNEGKGVSPEVEKLINKKLYIPNYPQERETSESLNVAIATAV
VCSEFRRRLLP

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: NA

Molecular weight: Translated: 27941; Mature: 27941

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKNKIKYIRSLELKKKRKEEQVFVAEGHKLVGDLLGHFPCKLLIATSNWLKMNHSATA
CCCCHHHHHHHHHHHHHHHHHHEEEHHCCHHHHHHHHHCCCEEEEEEECCEEEECCCCCH
NEIIEVTQEELSRASLQKTPQEVLAVFVQPSYDLNPEVIKSSLCLALDDVQDPGNLGTII
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
RLADWFGIEHIFCSTGTADVYNPKTVQATMGALARVKVHYCSLPQLIESLTDIPVYGTFL
HHHHHHCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEE
NGNIIYTESLSAHGLIVMGNEGKGVSPEVEKLINKKLYIPNYPQERETSESLNVAIATAV
CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
VCSEFRRRLLP
HHHHHHHHCCC
>Mature Secondary Structure
MLSKNKIKYIRSLELKKKRKEEQVFVAEGHKLVGDLLGHFPCKLLIATSNWLKMNHSATA
CCCCHHHHHHHHHHHHHHHHHHEEEHHCCHHHHHHHHHCCCEEEEEEECCEEEECCCCCH
NEIIEVTQEELSRASLQKTPQEVLAVFVQPSYDLNPEVIKSSLCLALDDVQDPGNLGTII
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
RLADWFGIEHIFCSTGTADVYNPKTVQATMGALARVKVHYCSLPQLIESLTDIPVYGTFL
HHHHHHCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEE
NGNIIYTESLSAHGLIVMGNEGKGVSPEVEKLINKKLYIPNYPQERETSESLNVAIATAV
CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
VCSEFRRRLLP
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]