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The map label for this gene is yjdI [H]

Identifier: 150005562

GI number: 150005562

Start: 3856991

End: 3857476

Strand: Direct

Name: yjdI [H]

Synonym: BVU_3047

Alternate gene names: 150005562

Gene position: 3856991-3857476 (Clockwise)

Preceding gene: 150005561

Following gene: 150005563

Centisome position: 74.7

GC content: 45.68

Gene sequence:

>486_bases
ATGAAAGAGAAAATAGCTAAAACCAACGTAGCCCGTCTGCTTGATAAGGCCAAGATAGCATACGAGCTTATTTCATACGA
AGTAGACGAGAACGACCTCAGCGCTGTTCACGTTGCCGCCAGTTTGGGCGAGAACATAGAACAAGTCTTCAAGACTTTGG
TGCTTCATGGGGATAAATCCGGATATTTTGTCTGTGTCATACCCGGCGAGCACGAGGTGGATTTAAAAATGGCGGCAAAA
GTCTCAGGTAACAAGAAATGCGACCTGATTCCCATGAAAGAGCTGCTTCCCCTGACAGGATATATCCGGGGAGGATGTTC
TCCCATCGGCATGAAAAAGCATTTCCCCACCTATATACACGAGACTTGCATCGCATTCCCGTACATTTATATCAGTGCCG
GTATCCGCGGATTACAGATAAAAATAGCGGCCGATGACCTGATAAAAGAAACGAAAGCAGAGATTTGTTCCCTTTTCACC
GAATAA

Upstream 100 bases:

>100_bases
TGCTTGCTGCCGGAACTCCTGAGGAAGTGGCCGGAAGCAAGAAAGGATATACCCCGAAATTTATAAAAGAAGAATTGGAA
AATTAACCGGCATACCAGCA

Downstream 100 bases:

>100_bases
ATATGCCAAAAAGAGTCACATTTGTGGCTCTTTTTTTTTCAGATAGACTAAAAGTTATATCTTTGCAAAAAAAGAATACT
AACTATTAATTAAATCTTTA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKEKIAKTNVARLLDKAKIAYELISYEVDENDLSAVHVAASLGENIEQVFKTLVLHGDKSGYFVCVIPGEHEVDLKMAAK
VSGNKKCDLIPMKELLPLTGYIRGGCSPIGMKKHFPTYIHETCIAFPYIYISAGIRGLQIKIAADDLIKETKAEICSLFT
E

Sequences:

>Translated_161_residues
MKEKIAKTNVARLLDKAKIAYELISYEVDENDLSAVHVAASLGENIEQVFKTLVLHGDKSGYFVCVIPGEHEVDLKMAAK
VSGNKKCDLIPMKELLPLTGYIRGGCSPIGMKKHFPTYIHETCIAFPYIYISAGIRGLQIKIAADDLIKETKAEICSLFT
E
>Mature_161_residues
MKEKIAKTNVARLLDKAKIAYELISYEVDENDLSAVHVAASLGENIEQVFKTLVLHGDKSGYFVCVIPGEHEVDLKMAAK
VSGNKKCDLIPMKELLPLTGYIRGGCSPIGMKKHFPTYIHETCIAFPYIYISAGIRGLQIKIAADDLIKETKAEICSLFT
E

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=154, Percent_Identity=38.3116883116883, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17804; Mature: 17804

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKIAKTNVARLLDKAKIAYELISYEVDENDLSAVHVAASLGENIEQVFKTLVLHGDKS
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCC
GYFVCVIPGEHEVDLKMAAKVSGNKKCDLIPMKELLPLTGYIRGGCSPIGMKKHFPTYIH
CEEEEEECCCCCCCCEEEEECCCCCCCCEECHHHHHCHHHHHCCCCCCCCCCCCCHHHHH
ETCIAFPYIYISAGIRGLQIKIAADDLIKETKAEICSLFTE
HHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEKIAKTNVARLLDKAKIAYELISYEVDENDLSAVHVAASLGENIEQVFKTLVLHGDKS
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCC
GYFVCVIPGEHEVDLKMAAKVSGNKKCDLIPMKELLPLTGYIRGGCSPIGMKKHFPTYIH
CEEEEEECCCCCCCCEEEEECCCCCCCCEECHHHHHCHHHHHCCCCCCCCCCCCCHHHHH
ETCIAFPYIYISAGIRGLQIKIAADDLIKETKAEICSLFTE
HHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]