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The map label for this gene is yfmR [H]

Identifier: 150005456

GI number: 150005456

Start: 3732361

End: 3734226

Strand: Direct

Name: yfmR [H]

Synonym: BVU_2939

Alternate gene names: 150005456

Gene position: 3732361-3734226 (Clockwise)

Preceding gene: 150005455

Following gene: 150005457

Centisome position: 72.29

GC content: 48.93

Gene sequence:

>1866_bases
ATGACCCCATATATGCAAGTAGACGGGCTTACCAAGTCATTCGGTGACTTGGTATTGTTCCGAAAGATTTCATTTGGAGT
GGCCGAAGGACAACGCATCGGTCTGATAGCAAAGAACGGTACAGGCAAGACTACCTTACTTAATATAATAGCCGGTAAGG
AGGGATATGATGAAGGAAGCATCGTCTTTCGTCGTGATCTGCGGGTGGGCTATTTGGAGCAAGACCCACATTATCCCGAA
GACCTGACCGTGCTCGAAGCCTGTTTCTATCACGGAAACAGCACGGTGGAACTCATCAAAGAATATGAAAGCTGCATGGA
AACCGAAGGCAATCCGGGACTGGAAGAGCTGTTGGCACGGATGGAGCACGAAAAGGCATGGGATTATGAACGGAAGGCGA
AACAAATCCTTTCTCAATTAAAAATCCGGGACTTCAGCCAGCAGATCAAACATCTTTCCGGAGGTCAGTTGAAACGGGTG
GCTTTGGCGAATGTGCTGATAACCGAGCCCGATTTCCTGATTTTGGATGAGCCTACCAACCATCTTGATCTGGATATGAC
GGAGTGGCTGGAGGGGTATCTCGGCCGGGGAAACATCAGTCTGCTTATGGTGACGCACGACCGTTATTTCCTGGACCGCG
TCTGCTCTGAAATTATCGAGATAGACAATCAGCAGGTCTATTCATATAAAGGGAACTACAGCTATTACTTGGAAAAGAGG
CAGGAGCGTATCGAGGCGACCAATGCCGAAATAGCCCGTGCCAATAACTTGTACCGCACAGAGCTGGAGTGGATGCGCCG
TATGCCCCAGGCACGCGGACATAAAGCGCGTTATCGGGAAGAAGCTTTCTACGAACTGGAGAAAGTGGCGAAGCAGCGTT
TCAACGACGGCAATGTGAAACTGGATATGAAAGCCTCTTACATCGGCTCCAAGATTTTTGAGGCGGATCATCTGTACAAG
CGTTTCGGTGATTTGAAGATTCTGGAAGATTTCTCGTATATCTTTGCCCGTTATGAGAAGATGGGCATCGTGGGAAACAA
TGGTACGGGAAAGTCCACGTTCATTAAAATACTGATGGGCGAACAGAAGCCGGACAGTGGAACATTGGATATCGGTGAGA
CAGTCCGTTTCGGTTACTATTCTCAGGATGGCCTGAAGTTTGACGAGCAAATGAAGGTCATCGACGTGGTGCAGGATATT
GCCGAAGTCATCGAATTGGGAAATGGCAAGAAACTGACCGCATCCCAGTTCCTGCAACATTTTCTGTTTACTCCCGAAAC
ACAGCATAGTTATGTATATAAACTGAGTGGGGGAGAACGCCGCCGCCTGTACCTGTGTACGGTATTGATGCGTAATCCCA
ACTTCCTGGTGCTGGATGAGCCTACCAACGATCTCGATATCATCACCCTTCAGGTATTGGAAGAATATTTGCAGAACTTC
AAGGGCTGTGTAATCGTAGTAAGCCACGACCGCTATTTCATGGACAAGGTGGTAGACCACTTGCTGGTATTCAAGGGACA
GGGAGACATTCGTGATTTTCCGGGCAACTACTCCGATTATCGTGACTGGCGCGAGGCGAAAGAGCAGCGCGACAAAGAGG
CGGAAAAGCCAAAAGAGGAAAAGACCGCCCGCGTGCGCCTGAATGACAAGCGGAAAATGTCTTTCAAGGAAAAGAAAGAG
TTCGAGCAGCTGGAACAAGAAATAGCCGGGCTGGAACAGGAGAAGGCCGATATAGAAGCCGCCCTTTGCAGCGGTACGCT
GGGAGTGGAGGAACTGACGGAGAAATCCAAACGATTGCCGGAACTGAATGATTTGATTGATGAAAAGACCATGCGCTGGT
TGGAACTGAGCGAGATAGAAGGATAG

Upstream 100 bases:

>100_bases
AAAGCTAAAAAGGGACTCCCCTGCGACTTGAAATCCGAATTCAGGAAAATTAAGCGAGAGGCGGAGGCAGTGTTGGATGA
TTTAAATAAATAGACAAATA

Downstream 100 bases:

>100_bases
AATAACCGGAGGTGCAACAGTGTACCTGATGCCATATTGCTATATTCGTTTTGAATAACAAAACCATAATATAGAAAAGA
AATATGGCATCCATTAAATT

Product: putative ATP-binding component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 620

Protein sequence:

>621_residues
MTPYMQVDGLTKSFGDLVLFRKISFGVAEGQRIGLIAKNGTGKTTLLNIIAGKEGYDEGSIVFRRDLRVGYLEQDPHYPE
DLTVLEACFYHGNSTVELIKEYESCMETEGNPGLEELLARMEHEKAWDYERKAKQILSQLKIRDFSQQIKHLSGGQLKRV
ALANVLITEPDFLILDEPTNHLDLDMTEWLEGYLGRGNISLLMVTHDRYFLDRVCSEIIEIDNQQVYSYKGNYSYYLEKR
QERIEATNAEIARANNLYRTELEWMRRMPQARGHKARYREEAFYELEKVAKQRFNDGNVKLDMKASYIGSKIFEADHLYK
RFGDLKILEDFSYIFARYEKMGIVGNNGTGKSTFIKILMGEQKPDSGTLDIGETVRFGYYSQDGLKFDEQMKVIDVVQDI
AEVIELGNGKKLTASQFLQHFLFTPETQHSYVYKLSGGERRRLYLCTVLMRNPNFLVLDEPTNDLDIITLQVLEEYLQNF
KGCVIVVSHDRYFMDKVVDHLLVFKGQGDIRDFPGNYSDYRDWREAKEQRDKEAEKPKEEKTARVRLNDKRKMSFKEKKE
FEQLEQEIAGLEQEKADIEAALCSGTLGVEELTEKSKRLPELNDLIDEKTMRWLELSEIEG

Sequences:

>Translated_621_residues
MTPYMQVDGLTKSFGDLVLFRKISFGVAEGQRIGLIAKNGTGKTTLLNIIAGKEGYDEGSIVFRRDLRVGYLEQDPHYPE
DLTVLEACFYHGNSTVELIKEYESCMETEGNPGLEELLARMEHEKAWDYERKAKQILSQLKIRDFSQQIKHLSGGQLKRV
ALANVLITEPDFLILDEPTNHLDLDMTEWLEGYLGRGNISLLMVTHDRYFLDRVCSEIIEIDNQQVYSYKGNYSYYLEKR
QERIEATNAEIARANNLYRTELEWMRRMPQARGHKARYREEAFYELEKVAKQRFNDGNVKLDMKASYIGSKIFEADHLYK
RFGDLKILEDFSYIFARYEKMGIVGNNGTGKSTFIKILMGEQKPDSGTLDIGETVRFGYYSQDGLKFDEQMKVIDVVQDI
AEVIELGNGKKLTASQFLQHFLFTPETQHSYVYKLSGGERRRLYLCTVLMRNPNFLVLDEPTNDLDIITLQVLEEYLQNF
KGCVIVVSHDRYFMDKVVDHLLVFKGQGDIRDFPGNYSDYRDWREAKEQRDKEAEKPKEEKTARVRLNDKRKMSFKEKKE
FEQLEQEIAGLEQEKADIEAALCSGTLGVEELTEKSKRLPELNDLIDEKTMRWLELSEIEG
>Mature_620_residues
TPYMQVDGLTKSFGDLVLFRKISFGVAEGQRIGLIAKNGTGKTTLLNIIAGKEGYDEGSIVFRRDLRVGYLEQDPHYPED
LTVLEACFYHGNSTVELIKEYESCMETEGNPGLEELLARMEHEKAWDYERKAKQILSQLKIRDFSQQIKHLSGGQLKRVA
LANVLITEPDFLILDEPTNHLDLDMTEWLEGYLGRGNISLLMVTHDRYFLDRVCSEIIEIDNQQVYSYKGNYSYYLEKRQ
ERIEATNAEIARANNLYRTELEWMRRMPQARGHKARYREEAFYELEKVAKQRFNDGNVKLDMKASYIGSKIFEADHLYKR
FGDLKILEDFSYIFARYEKMGIVGNNGTGKSTFIKILMGEQKPDSGTLDIGETVRFGYYSQDGLKFDEQMKVIDVVQDIA
EVIELGNGKKLTASQFLQHFLFTPETQHSYVYKLSGGERRRLYLCTVLMRNPNFLVLDEPTNDLDIITLQVLEEYLQNFK
GCVIVVSHDRYFMDKVVDHLLVFKGQGDIRDFPGNYSDYRDWREAKEQRDKEAEKPKEEKTARVRLNDKRKMSFKEKKEF
EQLEQEIAGLEQEKADIEAALCSGTLGVEELTEKSKRLPELNDLIDEKTMRWLELSEIEG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=539, Percent_Identity=29.4990723562152, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI10947137, Length=550, Percent_Identity=28.7272727272727, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI27881506, Length=550, Percent_Identity=28.7272727272727, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI10947135, Length=526, Percent_Identity=28.1368821292776, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI69354671, Length=526, Percent_Identity=28.1368821292776, Blast_Score=161, Evalue=2e-39,
Organism=Escherichia coli, GI2367384, Length=540, Percent_Identity=34.6296296296296, Blast_Score=329, Evalue=4e-91,
Organism=Escherichia coli, GI1787182, Length=591, Percent_Identity=32.994923857868, Blast_Score=297, Evalue=2e-81,
Organism=Escherichia coli, GI1789751, Length=633, Percent_Identity=28.5939968404423, Blast_Score=258, Evalue=7e-70,
Organism=Escherichia coli, GI1787041, Length=523, Percent_Identity=29.8279158699809, Blast_Score=236, Evalue=4e-63,
Organism=Escherichia coli, GI48994943, Length=497, Percent_Identity=25.3521126760563, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI87081782, Length=600, Percent_Identity=22.1666666666667, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1788761, Length=242, Percent_Identity=30.1652892561983, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1788165, Length=205, Percent_Identity=28.2926829268293, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789672, Length=259, Percent_Identity=25.4826254826255, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=26.6355140186916, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=25.462962962963, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787792, Length=204, Percent_Identity=27.4509803921569, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787089, Length=264, Percent_Identity=25.3787878787879, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786563, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788506, Length=245, Percent_Identity=24.0816326530612, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786398, Length=210, Percent_Identity=25.7142857142857, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789593, Length=199, Percent_Identity=25.6281407035176, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=549, Percent_Identity=27.1402550091075, Blast_Score=199, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17553372, Length=546, Percent_Identity=26.9230769230769, Blast_Score=173, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17555318, Length=527, Percent_Identity=27.7039848197343, Blast_Score=169, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6320874, Length=541, Percent_Identity=28.6506469500924, Blast_Score=194, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6321121, Length=529, Percent_Identity=27.9773156899811, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6325030, Length=382, Percent_Identity=29.0575916230367, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=380, Percent_Identity=27.6315789473684, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6323278, Length=383, Percent_Identity=26.8929503916449, Blast_Score=118, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24666836, Length=534, Percent_Identity=29.2134831460674, Blast_Score=198, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24641342, Length=557, Percent_Identity=30.1615798922801, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24642252, Length=521, Percent_Identity=26.8714011516315, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI18859989, Length=521, Percent_Identity=26.8714011516315, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI116007184, Length=268, Percent_Identity=26.1194029850746, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=268, Percent_Identity=26.1194029850746, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24659289, Length=300, Percent_Identity=24.6666666666667, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72105; Mature: 71974

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPYMQVDGLTKSFGDLVLFRKISFGVAEGQRIGLIAKNGTGKTTLLNIIAGKEGYDEGS
CCCCEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCC
IVFRRDLRVGYLEQDPHYPEDLTVLEACFYHGNSTVELIKEYESCMETEGNPGLEELLAR
EEEEECCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
MEHEKAWDYERKAKQILSQLKIRDFSQQIKHLSGGQLKRVALANVLITEPDFLILDEPTN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEECCCEEEEECCCC
HLDLDMTEWLEGYLGRGNISLLMVTHDRYFLDRVCSEIIEIDNQQVYSYKGNYSYYLEKR
CCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
QERIEATNAEIARANNLYRTELEWMRRMPQARGHKARYREEAFYELEKVAKQRFNDGNVK
HHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
LDMKASYIGSKIFEADHLYKRFGDLKILEDFSYIFARYEKMGIVGNNGTGKSTFIKILMG
EEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHEEEEEEC
EQKPDSGTLDIGETVRFGYYSQDGLKFDEQMKVIDVVQDIAEVIELGNGKKLTASQFLQH
CCCCCCCCEECCCCEEECEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHH
FLFTPETQHSYVYKLSGGERRRLYLCTVLMRNPNFLVLDEPTNDLDIITLQVLEEYLQNF
HHCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCEEEHHHHHHHHHCC
KGCVIVVSHDRYFMDKVVDHLLVFKGQGDIRDFPGNYSDYRDWREAKEQRDKEAEKPKEE
CCEEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH
KTARVRLNDKRKMSFKEKKEFEQLEQEIAGLEQEKADIEAALCSGTLGVEELTEKSKRLP
CCEEEEECCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
ELNDLIDEKTMRWLELSEIEG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPYMQVDGLTKSFGDLVLFRKISFGVAEGQRIGLIAKNGTGKTTLLNIIAGKEGYDEGS
CCCEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCC
IVFRRDLRVGYLEQDPHYPEDLTVLEACFYHGNSTVELIKEYESCMETEGNPGLEELLAR
EEEEECCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
MEHEKAWDYERKAKQILSQLKIRDFSQQIKHLSGGQLKRVALANVLITEPDFLILDEPTN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEECCCEEEEECCCC
HLDLDMTEWLEGYLGRGNISLLMVTHDRYFLDRVCSEIIEIDNQQVYSYKGNYSYYLEKR
CCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
QERIEATNAEIARANNLYRTELEWMRRMPQARGHKARYREEAFYELEKVAKQRFNDGNVK
HHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
LDMKASYIGSKIFEADHLYKRFGDLKILEDFSYIFARYEKMGIVGNNGTGKSTFIKILMG
EEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHEEEEEEC
EQKPDSGTLDIGETVRFGYYSQDGLKFDEQMKVIDVVQDIAEVIELGNGKKLTASQFLQH
CCCCCCCCEECCCCEEECEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHH
FLFTPETQHSYVYKLSGGERRRLYLCTVLMRNPNFLVLDEPTNDLDIITLQVLEEYLQNF
HHCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCEEEHHHHHHHHHCC
KGCVIVVSHDRYFMDKVVDHLLVFKGQGDIRDFPGNYSDYRDWREAKEQRDKEAEKPKEE
CCEEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH
KTARVRLNDKRKMSFKEKKEFEQLEQEIAGLEQEKADIEAALCSGTLGVEELTEKSKRLP
CCEEEEECCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
ELNDLIDEKTMRWLELSEIEG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]