| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is mtbA [H]
Identifier: 150005444
GI number: 150005444
Start: 3716362
End: 3717372
Strand: Direct
Name: mtbA [H]
Synonym: BVU_2927
Alternate gene names: 150005444
Gene position: 3716362-3717372 (Clockwise)
Preceding gene: 150005442
Following gene: 150005445
Centisome position: 71.98
GC content: 47.28
Gene sequence:
>1011_bases ATGAGTAAACTGAATATGAAAGAGTGGATAAACGAAATTATCCAAAAGAAAGAAGTGGTGGCTATGCCCATCATGACCCA TCCGGGCATAGAGATGATAGGGAAAACGGTACGCGATGCCGTCACTGACGGACAAGTGCATTACAACGCCATCAAGGCAT TGAGTGAGAAATATCCCACAGCCGCCGCAACCGTGATTATGGATTTGACGGTAGAAGCCGAGGCTTTCGGAGCGGAGATT GTCTTCCCCGAAAATGAGGTTCCCAGTGTGGTGGGGCGTCTTCTCAATGATGAAGAAGCTATTGACAAACTGGAAATCCC TGCCTTGAATAAAGGAAGAATCCCCCAGTATCTGAAAGCAAATATGCTGGCAGCCAAGACCATTACGGACCGGCCCGTCT TTGCCGGTTGCATCGGCCCTTACTCATTGGCAGGACGTTTGTATGACATGTCTGAAATCATGATGCTTATTTATATCAAT CCGGAAGCGGCCAATTCGCTGTTGAAGAAATGTTCGGATTTCATTCTCCGTTACTGTATGGCATTGAAGGCCACAGGAGT GAATGGGGTAGTGATGGCCGAGCCGGCTGCCGGACTCTTGTCTGATGAGGACTGCACGCAATACTCGTCTGTTTTCATTA AGGAGATAGTAGAGAAAGTGCAGGACGATCACTTCACGGTCATTCTGCATAATTGTGGAAATACCGGTCATTGTACCAAG GCAATGGTAGCTACAGGAGCTGCCGCTTATCATTTTGGAAATAAAATAGATATGGTCGAAGCTCTGAAAGAAGTACCTGC CGATGCCCTTGCAATGGGAAATCTTGATCCGGTGAGCTTGTTCAAGGCGGCTACTCCGGAGGTGATGAAGAAAGCCACAC TCGATTTGTTGGAAGCTACCCGGTCCTATCCCAACTTCGTGCTCTCCAGCGGATGTGATACACCGCCTCATACGCCATCT GAAAATATTGATGCATTCTTTGCCGCATTAAATGAATTCAATAATGCTTGA
Upstream 100 bases:
>100_bases AATGAATGTCCCTATTTACATATTTAAATTTATGTATGAGTACAATGTTTTTTCATATGCGTCATTAAACATAGCCAATA TAGGTAAAGAATAAAAGACC
Downstream 100 bases:
>100_bases AAAAGAACTTTCTTTTGCTGATCTGTCTATCTCATTGTCCGAACTCTATGAGGCAATGGGGTATGCAGATGCTGTGCCCG ACGAAGCGGTAGAAAAAGAA
Product: methylcobamide:CoM methyltransferase mtbA
Products: CO2; Coproporphyrinogen III [C]
Alternate protein names: MT2-A; Methylcobamide:CoM methyltransferase II isozyme A [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSKLNMKEWINEIIQKKEVVAMPIMTHPGIEMIGKTVRDAVTDGQVHYNAIKALSEKYPTAAATVIMDLTVEAEAFGAEI VFPENEVPSVVGRLLNDEEAIDKLEIPALNKGRIPQYLKANMLAAKTITDRPVFAGCIGPYSLAGRLYDMSEIMMLIYIN PEAANSLLKKCSDFILRYCMALKATGVNGVVMAEPAAGLLSDEDCTQYSSVFIKEIVEKVQDDHFTVILHNCGNTGHCTK AMVATGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPEVMKKATLDLLEATRSYPNFVLSSGCDTPPHTPS ENIDAFFAALNEFNNA
Sequences:
>Translated_336_residues MSKLNMKEWINEIIQKKEVVAMPIMTHPGIEMIGKTVRDAVTDGQVHYNAIKALSEKYPTAAATVIMDLTVEAEAFGAEI VFPENEVPSVVGRLLNDEEAIDKLEIPALNKGRIPQYLKANMLAAKTITDRPVFAGCIGPYSLAGRLYDMSEIMMLIYIN PEAANSLLKKCSDFILRYCMALKATGVNGVVMAEPAAGLLSDEDCTQYSSVFIKEIVEKVQDDHFTVILHNCGNTGHCTK AMVATGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPEVMKKATLDLLEATRSYPNFVLSSGCDTPPHTPS ENIDAFFAALNEFNNA >Mature_335_residues SKLNMKEWINEIIQKKEVVAMPIMTHPGIEMIGKTVRDAVTDGQVHYNAIKALSEKYPTAAATVIMDLTVEAEAFGAEIV FPENEVPSVVGRLLNDEEAIDKLEIPALNKGRIPQYLKANMLAAKTITDRPVFAGCIGPYSLAGRLYDMSEIMMLIYINP EAANSLLKKCSDFILRYCMALKATGVNGVVMAEPAAGLLSDEDCTQYSSVFIKEIVEKVQDDHFTVILHNCGNTGHCTKA MVATGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPEVMKKATLDLLEATRSYPNFVLSSGCDTPPHTPSE NIDAFFAALNEFNNA
Specific function: Catalyzes the transfer of the methyl group from the methylated corrinoid cofactor of mtmC, mtbC and mttC to coenzyme M [H]
COG id: COG0407
COG function: function code H; Uroporphyrinogen-III decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uroporphyrinogen decarboxylase family. MtbA/mtaA subfamily [H]
Homologues:
Organism=Escherichia coli, GI2367337, Length=294, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006360 - InterPro: IPR000257 [H]
Pfam domain/function: PF01208 URO-D [H]
EC number: 4.1.1.37 [C]
Molecular weight: Translated: 36571; Mature: 36439
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLNMKEWINEIIQKKEVVAMPIMTHPGIEMIGKTVRDAVTDGQVHYNAIKALSEKYPT CCCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH AAATVIMDLTVEAEAFGAEIVFPENEVPSVVGRLLNDEEAIDKLEIPALNKGRIPQYLKA HHHHHHHHEEEEHHHCCCEEECCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHH NMLAAKTITDRPVFAGCIGPYSLAGRLYDMSEIMMLIYINPEAANSLLKKCSDFILRYCM HHHHHHHCCCCCCHHHCCCHHHHHHHHCCHHHEEEEEEECHHHHHHHHHHHHHHHHHHHH ALKATGVNGVVMAEPAAGLLSDEDCTQYSSVFIKEIVEKVQDDHFTVILHNCGNTGHCTK HHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH AMVATGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPEVMKKATLDLLEAT HHHHHCHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH RSYPNFVLSSGCDTPPHTPSENIDAFFAALNEFNNA HCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SKLNMKEWINEIIQKKEVVAMPIMTHPGIEMIGKTVRDAVTDGQVHYNAIKALSEKYPT CCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH AAATVIMDLTVEAEAFGAEIVFPENEVPSVVGRLLNDEEAIDKLEIPALNKGRIPQYLKA HHHHHHHHEEEEHHHCCCEEECCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHH NMLAAKTITDRPVFAGCIGPYSLAGRLYDMSEIMMLIYINPEAANSLLKKCSDFILRYCM HHHHHHHCCCCCCHHHCCCHHHHHHHHCCHHHEEEEEEECHHHHHHHHHHHHHHHHHHHH ALKATGVNGVVMAEPAAGLLSDEDCTQYSSVFIKEIVEKVQDDHFTVILHNCGNTGHCTK HHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH AMVATGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPEVMKKATLDLLEAT HHHHHCHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH RSYPNFVLSSGCDTPPHTPSENIDAFFAALNEFNNA HCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Reducing agents [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.00231 {7-COOH,} 0.00053 {8-COOH-porphyrinogen} 0.00025 {8-COOH-porphyrinogen} 0.00533 {uroporphyrinogen} 0.00256 {uroporphyrinogen} 0.00133 {uroporphyrinogen} 0.001 {uroporphyrinogen} 0.0008 {uroporphyrinogen} 0.0004 {uroporphyrino
Substrates: H+; Uroporphyrinogen III [C]
Specific reaction: (4) H+ + Uroporphyrinogen III --> (4) CO2 + Coproporphyrinogen III [C]
General reaction: Decarboxylation [C]
Inhibitor: 5, 5'-Dithiobis (2-nitrobenzoate); 7-COOH-porphyrinogenI; 7-COOH-porphyrinogen III; Butanedione; Diethyl dicarbonate; Fe2+; Iodoacetamide; p-Hydroxy mercuribenzoate; Phenyl glyoxal; Pt2+; Sn2+; UroporphyrinogenI uroporphyrinogen III; Uroporphyrinogen III;
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]