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The map label for this gene is panD

Identifier: 150005416

GI number: 150005416

Start: 3665860

End: 3666210

Strand: Direct

Name: panD

Synonym: BVU_2899

Alternate gene names: 150005416

Gene position: 3665860-3666210 (Clockwise)

Preceding gene: 150005415

Following gene: 150005422

Centisome position: 71.0

GC content: 44.16

Gene sequence:

>351_bases
ATGATGATTGAGGTATTAAAGTCGAAACTGCATTGTGTCCGTGTAACGGAAGCCAATTTGAATTACATGGGTAGTATTAC
GATTGACGAGGACTTGATGGATGCCGCCAACATGATTGCCGGCGAGAAAGTGCACATTGTGGATAATAATAACGGCGAGA
GGTTTGAAACTTATATTATTAAGGGTGAGCGCGGTTCGGGATGTATTTGTCTGAATGGGGCTGCTGCCCGGAAAGTACAG
GTGGGTGACATTGTGATTATCATGTCATACGCCATGATGGATTTTGAGGAAGCTAAATCGTTCAAGCCGACGGTGGTTTT
CCCTGATTCGGCGATGAACAAGATTGTATAA

Upstream 100 bases:

>100_bases
TACGGATTATGCAGTAGGTTGCATTACGGTATTTTGCGGAGAGGTACGTTTGATAGATAATATAAAATATAAGGGATAGT
GATCGTTAACCATTAGAATT

Downstream 100 bases:

>100_bases
CGATATTTTTGTTCGGTAATCCAAAAGCCCGGTAGACGTGAGTCTGATACGGGCTTTATTTTTTTAGGGATATTCAGTAA
ATGTCTCTAAAAAATAAGAT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MMIEVLKSKLHCVRVTEANLNYMGSITIDEDLMDAANMIAGEKVHIVDNNNGERFETYIIKGERGSGCICLNGAAARKVQ
VGDIVIIMSYAMMDFEEAKSFKPTVVFPDSAMNKIV

Sequences:

>Translated_116_residues
MMIEVLKSKLHCVRVTEANLNYMGSITIDEDLMDAANMIAGEKVHIVDNNNGERFETYIIKGERGSGCICLNGAAARKVQ
VGDIVIIMSYAMMDFEEAKSFKPTVVFPDSAMNKIV
>Mature_116_residues
MMIEVLKSKLHCVRVTEANLNYMGSITIDEDLMDAANMIAGEKVHIVDNNNGERFETYIIKGERGSGCICLNGAAARKVQ
VGDIVIIMSYAMMDFEEAKSFKPTVVFPDSAMNKIV

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=107, Percent_Identity=48.5981308411215, Blast_Score=107, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_BACV8 (A6L4C4)

Other databases:

- EMBL:   CP000139
- RefSeq:   YP_001300160.1
- ProteinModelPortal:   A6L4C4
- SMR:   A6L4C4
- STRING:   A6L4C4
- GeneID:   5303860
- GenomeReviews:   CP000139_GR
- KEGG:   bvu:BVU_2899
- NMPDR:   fig|435590.6.peg.2716
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 12822; Mature: 12822

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIEVLKSKLHCVRVTEANLNYMGSITIDEDLMDAANMIAGEKVHIVDNNNGERFETYII
CHHHHHHCCCEEEEEEECCCCEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
KGERGSGCICLNGAAARKVQVGDIVIIMSYAMMDFEEAKSFKPTVVFPDSAMNKIV
ECCCCCCEEEECCCCCCEEECCCEEEEEEHHHHCHHHHCCCCCEEEECCHHHHHCC
>Mature Secondary Structure
MMIEVLKSKLHCVRVTEANLNYMGSITIDEDLMDAANMIAGEKVHIVDNNNGERFETYII
CHHHHHHCCCEEEEEEECCCCEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
KGERGSGCICLNGAAARKVQVGDIVIIMSYAMMDFEEAKSFKPTVVFPDSAMNKIV
ECCCCCCEEEECCCCCCEEECCCEEEEEEHHHHCHHHHCCCCCEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA