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The map label for this gene is dapA [H]

Identifier: 150005312

GI number: 150005312

Start: 3556766

End: 3557698

Strand: Direct

Name: dapA [H]

Synonym: BVU_2788

Alternate gene names: 150005312

Gene position: 3556766-3557698 (Clockwise)

Preceding gene: 150005311

Following gene: 150005313

Centisome position: 68.89

GC content: 46.95

Gene sequence:

>933_bases
ATGGAAAACACATTAAAAAAGCCTATGACAGGCATTATTCCTCCTTTAGTGACTCCGTTACTGGATAATGACAAACTGGA
TATTGATGGTTTGGAAAGGTTGATAGAACGATTGATAAAAGGAGGAGTGCACGGATTATTTATACTGGGTACCACCGGAG
AAGCGCAGAGTATCAGTTACCGGCTTCGCCATGAAATGATAAAGGAAACTTGCCGTATCAATGCCGGAAGACTTCCGGTT
CTGGTTTGTATTTCCGATACTTCAATTGTAGAAAGTATTCATCTGGCACATGTAGGGGCCGAGTGTGGTGCTTCAGCCGT
AGTTTCCGCTCCCCCTTACTACTTTGCTCCGGGACAGCCTGAACTGGCCGAATTTTATGAGGACCTGATTCCTCAGTTGC
CGTTACCTATCTTCTTGTACAATATGCCGTCGCACACGAAAGTGAATTTTGCTCCGGCTACTATTCAACGTATTGCCCGT
AATCCTCAGGTGGTGGGGTTCAAGGATAGTTCGGCTAATGCCGTTTATTTCCAGTCCGTGATGTATGCCATGAAGGACAG
ACAGGATTTCGCCATGTTGGTGGGACCGGAGGAAATTACGGCAGAGTGTGTGTTGCTGGGTGGACATGGGGGGATCAACG
GAGGTGCCAATATGTTCCCGGAATTATATGTAGATCTTTATCATGCTGCGGTAGCGCGTGACATGGAAACCGTAAGTCGG
CTGCAACCCTTGGTGATGCAAATCAGTAGCAGTATTTATACCGTGGGGCAGCATGGCTCCAGTTATTTGAAAGGATTGAA
ATGCGCGTTGTCTTTATTGGGCGTTTGTGATGATTTTGTTGCGGCTCCTTTCCATCGCTTCAATGTTCCGGAACGCGAGA
AGATACGCAAGGCGTTGGAGGCACTCCCTTTTTGTCCGGAATTGAAACCTTAA

Upstream 100 bases:

>100_bases
CTGTCGCTTTCCGGACAAGCCGGGATGTTGGGCTGAGTACAAATAATCCTACTGTTCGTTTCATAAATATAGCATTGAAA
TTTTTAAAAGAAAACGAATC

Downstream 100 bases:

>100_bases
ATGCTCGGTCTGTATGCATATCATTGATATAATCGTCTTTTTGTTGTTTACCGGCGGAGTCGTGGCCTTCGGTTGTTCTT
TCTTTAAGAAGAAAGGTACC

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MENTLKKPMTGIIPPLVTPLLDNDKLDIDGLERLIERLIKGGVHGLFILGTTGEAQSISYRLRHEMIKETCRINAGRLPV
LVCISDTSIVESIHLAHVGAECGASAVVSAPPYYFAPGQPELAEFYEDLIPQLPLPIFLYNMPSHTKVNFAPATIQRIAR
NPQVVGFKDSSANAVYFQSVMYAMKDRQDFAMLVGPEEITAECVLLGGHGGINGGANMFPELYVDLYHAAVARDMETVSR
LQPLVMQISSSIYTVGQHGSSYLKGLKCALSLLGVCDDFVAAPFHRFNVPEREKIRKALEALPFCPELKP

Sequences:

>Translated_310_residues
MENTLKKPMTGIIPPLVTPLLDNDKLDIDGLERLIERLIKGGVHGLFILGTTGEAQSISYRLRHEMIKETCRINAGRLPV
LVCISDTSIVESIHLAHVGAECGASAVVSAPPYYFAPGQPELAEFYEDLIPQLPLPIFLYNMPSHTKVNFAPATIQRIAR
NPQVVGFKDSSANAVYFQSVMYAMKDRQDFAMLVGPEEITAECVLLGGHGGINGGANMFPELYVDLYHAAVARDMETVSR
LQPLVMQISSSIYTVGQHGSSYLKGLKCALSLLGVCDDFVAAPFHRFNVPEREKIRKALEALPFCPELKP
>Mature_310_residues
MENTLKKPMTGIIPPLVTPLLDNDKLDIDGLERLIERLIKGGVHGLFILGTTGEAQSISYRLRHEMIKETCRINAGRLPV
LVCISDTSIVESIHLAHVGAECGASAVVSAPPYYFAPGQPELAEFYEDLIPQLPLPIFLYNMPSHTKVNFAPATIQRIAR
NPQVVGFKDSSANAVYFQSVMYAMKDRQDFAMLVGPEEITAECVLLGGHGGINGGANMFPELYVDLYHAAVARDMETVSR
LQPLVMQISSSIYTVGQHGSSYLKGLKCALSLLGVCDDFVAAPFHRFNVPEREKIRKALEALPFCPELKP

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=296, Percent_Identity=23.9864864864865, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI13540533, Length=272, Percent_Identity=23.5294117647059, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI87082415, Length=244, Percent_Identity=31.9672131147541, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1786463, Length=242, Percent_Identity=30.1652892561983, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1788823, Length=232, Percent_Identity=27.1551724137931, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1789620, Length=297, Percent_Identity=26.2626262626263, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 34027; Mature: 34027

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00666 DHDPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTLKKPMTGIIPPLVTPLLDNDKLDIDGLERLIERLIKGGVHGLFILGTTGEAQSISY
CCCCHHCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH
RLRHEMIKETCRINAGRLPVLVCISDTSIVESIHLAHVGAECGASAVVSAPPYYFAPGQP
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCHHCCCCCEECCCCCEECCCCC
ELAEFYEDLIPQLPLPIFLYNMPSHTKVNFAPATIQRIARNPQVVGFKDSSANAVYFQSV
HHHHHHHHHHCCCCCCEEEECCCCCCEEEECHHHHHHHHCCCCEEEECCCCCCHHHHHHH
MYAMKDRQDFAMLVGPEEITAECVLLGGHGGINGGANMFPELYVDLYHAAVARDMETVSR
HHHHHCCCCEEEEECCHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQPLVMQISSSIYTVGQHGSSYLKGLKCALSLLGVCDDFVAAPFHRFNVPEREKIRKALE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
ALPFCPELKP
HCCCCCCCCC
>Mature Secondary Structure
MENTLKKPMTGIIPPLVTPLLDNDKLDIDGLERLIERLIKGGVHGLFILGTTGEAQSISY
CCCCHHCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH
RLRHEMIKETCRINAGRLPVLVCISDTSIVESIHLAHVGAECGASAVVSAPPYYFAPGQP
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCHHCCCCCEECCCCCEECCCCC
ELAEFYEDLIPQLPLPIFLYNMPSHTKVNFAPATIQRIARNPQVVGFKDSSANAVYFQSV
HHHHHHHHHHCCCCCCEEEECCCCCCEEEECHHHHHHHHCCCCEEEECCCCCCHHHHHHH
MYAMKDRQDFAMLVGPEEITAECVLLGGHGGINGGANMFPELYVDLYHAAVARDMETVSR
HHHHHCCCCEEEEECCHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQPLVMQISSSIYTVGQHGSSYLKGLKCALSLLGVCDDFVAAPFHRFNVPEREKIRKALE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
ALPFCPELKP
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA