Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150005221

Identifier: 150005221

GI number: 150005221

Start: 3421256

End: 3422701

Strand: Direct

Name: 150005221

Synonym: BVU_2691

Alternate gene names: NA

Gene position: 3421256-3422701 (Clockwise)

Preceding gene: 150005220

Following gene: 150005222

Centisome position: 66.26

GC content: 39.35

Gene sequence:

>1446_bases
ATGAAAAAAAATATAATTATATTAGGCTTGATTTCTTTATTGGCCGTATCGTGCGGGGATGATTTTTTAACTACTCATCC
TGGTGATAGCGTTTCTACGGATTTGGCACTGAGTACAGAGCAGGATATAGATAATGCTGTGAATGGATTGTATGATTTGA
TGTCCAGCTATGGCTATTATGGCGGAACCATGTTTTTTTATGGGGATATGAAAGGGGATGATATGCAGAGTTCTTATAAT
AGCGGGAGAACTTGTAACCGGTGTTACTTATATGATCATCGCTCTACAAGCTTAAATGCCGGATATTTATGGGGACGTCC
TTTTTATATTATCCGTAATGCATGGAATGTGATCAATGCGATTGATGATGGAAAAGTGCAAGGTTCAGAGCAAAGATTAA
AGGAATTGAAAGGTGAGGCGATGACTATCATGGCACTTTGCCAGTTTGACTTGACCCGTTGTTTCGGTTATCCTTATACT
AAGGATAAAGGGGCCGGTTGGGGAGCTCCAATTGTAGATCATGCAATTACATTAGATGAAAATCCGCCACGCAGCACTGT
TGCAAAGGATTATGAGTTCATAATCAGTACATTGGAGGAGGCTATACCTTTAATGAGTACTTCTAAAAATAACAGCCGGA
TGAATGCGTATGCTGCAAGAGCATTGCTGTCTCGTATTTATCTGTATCATGATGATAACGAGAAAGCGTTTCAAATGGCA
AGCAACTTGATTGAAGAAGTGGAAGGAAATGGAATGTACCGTCTTTATACACGTGATGAATATGTTCCGGCATGGGATTT
GAAAAATACGTTTGGTACGGAATCATTATTTGAAATTGCTAATAGTACAGATGATAATGGAGGACGAAGTTCATTGGCAT
ATCTGATGCATTGGAATGGGTATCGTGAGATTTTTGCCACTCAGAAATTTGTGGATGAGTTATTGAGTGACCCGGAGGAT
ATTCGCTGTCTGTTGCTGGAAAAGAATGTTTATAATAAAAATGATGTATGGTGGTTGAAGAAATGGCCGGGAACAGATGC
TACGACTCCATCTTTTGAAAATAATTATGTTATTTTCCGTTTGTCTGAAGTCTATTTGAATGCGGCGGAAGCCGGAGTGA
AAATAGGTGGGGCATCTGCCGTAAAAGGTTTGAATTATCTGAATGCAATTGTGCAGCGTGCTAATCCTGCAAAGGAAGTA
ACGGCGGCTGAATATACATTGGATAGGGTGTTGGAAGAAAGAAGTAAAGAATTGATAGGTGAGGGGCATCGTTTCTTTGA
TATGTTGAGAAATGGAAAGACCATTGTTCGTAAGGGAGGATATCATTTACCGGGTATCGTGGAGGAAATAGACTGGGATT
ATTATAAATGTGTTTTACCGATTCCAACAGACCAGTTTACATTTAGTCCTGATATGGAGCAGAATCCGGGATATACTAAA
AATTAA

Upstream 100 bases:

>100_bases
TCCGGAGTTGAATGGAATTGTAAGTTATTTTACTCCTCCTCTTAAAACATTCGCATTTGGACTTGAACTTAAATTCTAAT
CAATTAACACCGAACTGTTT

Downstream 100 bases:

>100_bases
TTTTAAATAATTATTAAATGAGAGGGTGTGGTATCACACCCTTTTTTTGTGTGGACAAATTCTACATTCATGTGGATTTA
TTCTACAATTTTACAGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Ragb/Susd DomaiN-Containing Protein; RagB/SusD Family Protein; Outer Membrane Receptor Protein; SusD Outer Membrane Protein; Tetratricopeptide Repeat Protein; Lipoprotein

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYYGGTMFFYGDMKGDDMQSSYN
SGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINAIDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYT
KDKGAGWGAPIVDHAITLDENPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA
SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNGYREIFATQKFVDELLSDPED
IRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFRLSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEV
TAAEYTLDRVLEERSKELIGEGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK
N

Sequences:

>Translated_481_residues
MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYYGGTMFFYGDMKGDDMQSSYN
SGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINAIDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYT
KDKGAGWGAPIVDHAITLDENPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA
SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNGYREIFATQKFVDELLSDPED
IRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFRLSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEV
TAAEYTLDRVLEERSKELIGEGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK
N
>Mature_481_residues
MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYYGGTMFFYGDMKGDDMQSSYN
SGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINAIDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYT
KDKGAGWGAPIVDHAITLDENPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA
SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNGYREIFATQKFVDELLSDPED
IRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFRLSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEV
TAAEYTLDRVLEERSKELIGEGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK
N

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54468; Mature: 54468

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYY
CCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC
GGTMFFYGDMKGDDMQSSYNSGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINA
CCEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEECCCCEEEEEHHHHHHHC
IDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYTKDKGAGWGAPIVDHAITLDE
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEECC
NPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHH
SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNG
HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHEEEEEECCC
YREIFATQKFVDELLSDPEDIRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFR
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE
LSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEVTAAEYTLDRVLEERSKELIG
EHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK
CCHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCEEEEEEECCCCCCEECCCCCCCCCCCC
N
C
>Mature Secondary Structure
MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYY
CCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC
GGTMFFYGDMKGDDMQSSYNSGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINA
CCEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEECCCCEEEEEHHHHHHHC
IDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYTKDKGAGWGAPIVDHAITLDE
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEECC
NPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHH
SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNG
HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHEEEEEECCC
YREIFATQKFVDELLSDPEDIRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFR
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE
LSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEVTAAEYTLDRVLEERSKELIG
EHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK
CCHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCEEEEEEECCCCCCEECCCCCCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA