Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is 150005203

Identifier: 150005203

GI number: 150005203

Start: 3393741

End: 3394190

Strand: Direct

Name: 150005203

Synonym: BVU_2673

Alternate gene names: NA

Gene position: 3393741-3394190 (Clockwise)

Preceding gene: 150005202

Following gene: 150005215

Centisome position: 65.73

GC content: 50.0

Gene sequence:

>450_bases
ATGAGAGTGATTAATCTGATTGTTGTCCACTGTTCCGCCACAAAGGCGGACAGGGACTTTACCGAACAGGATTTGGAGGT
GTGCCACCGCAGGCGTGGAATGAACGGACCCGGATATCATTTTTATATCCGCAAGAACGGGGATATAAAAACAACCCGTC
CCATAGAGAAAATCGGGGCGCATGCGCGTGGGTATAATGCGCAGAGTATCGGGATATGCTATGAGGGGGGAATCAGTGAG
CGGGGCAGGCCGGAGGATACGCGGACGGTGTGGCAGAAACATTCGTTGCGTGTACTGGTCAGGACGTTGCTGGTGGATTA
TCCCGGTTGCAAGGTTTGCGGTCATCGGGATTTAAGTCCGGATTTGAACGGAAATGGCGAGATAGAGCCTGAGGAATGGG
TGAAACAGTGTCCCTGTTTTGATGTTTCGAAAGAAAAATATAGTAAATAA

Upstream 100 bases:

>100_bases
GAATGAAAGGTAAATCTGTCTGGAGCACTATTTTGAAAGTGGTGATTGCAGTAGCTACGGCTATTGCGGGTGTAGTAGGA
ATCAGCTCGTGCATAGGGGG

Downstream 100 bases:

>100_bases
TATTTATATATTGAAACGTAATAAGACTAATTCTCTTCTGAATTTGTTAAAATATTAACACATTGGAAAGAGAATTAGTC
TTATGTTATTATGTAATTAC

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRVINLIVVHCSATKADRDFTEQDLEVCHRRRGMNGPGYHFYIRKNGDIKTTRPIEKIGAHARGYNAQSIGICYEGGISE
RGRPEDTRTVWQKHSLRVLVRTLLVDYPGCKVCGHRDLSPDLNGNGEIEPEEWVKQCPCFDVSKEKYSK

Sequences:

>Translated_149_residues
MRVINLIVVHCSATKADRDFTEQDLEVCHRRRGMNGPGYHFYIRKNGDIKTTRPIEKIGAHARGYNAQSIGICYEGGISE
RGRPEDTRTVWQKHSLRVLVRTLLVDYPGCKVCGHRDLSPDLNGNGEIEPEEWVKQCPCFDVSKEKYSK
>Mature_149_residues
MRVINLIVVHCSATKADRDFTEQDLEVCHRRRGMNGPGYHFYIRKNGDIKTTRPIEKIGAHARGYNAQSIGICYEGGISE
RGRPEDTRTVWQKHSLRVLVRTLLVDYPGCKVCGHRDLSPDLNGNGEIEPEEWVKQCPCFDVSKEKYSK

Specific function: Unknown

COG id: COG3023

COG function: function code V; Negative regulator of beta-lactamase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002502
- InterPro:   IPR018247
- InterPro:   IPR015510 [H]

Pfam domain/function: PF01510 Amidase_2 [H]

EC number: NA

Molecular weight: Translated: 17019; Mature: 17019

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVINLIVVHCSATKADRDFTEQDLEVCHRRRGMNGPGYHFYIRKNGDIKTTRPIEKIGA
CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHCC
HARGYNAQSIGICYEGGISERGRPEDTRTVWQKHSLRVLVRTLLVDYPGCKVCGHRDLSP
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DLNGNGEIEPEEWVKQCPCFDVSKEKYSK
CCCCCCCCCHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MRVINLIVVHCSATKADRDFTEQDLEVCHRRRGMNGPGYHFYIRKNGDIKTTRPIEKIGA
CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHCC
HARGYNAQSIGICYEGGISERGRPEDTRTVWQKHSLRVLVRTLLVDYPGCKVCGHRDLSP
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DLNGNGEIEPEEWVKQCPCFDVSKEKYSK
CCCCCCCCCHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]