| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005172
Identifier: 150005172
GI number: 150005172
Start: 3352347
End: 3354791
Strand: Direct
Name: 150005172
Synonym: BVU_2642
Alternate gene names: NA
Gene position: 3352347-3354791 (Clockwise)
Preceding gene: 150005170
Following gene: 150005173
Centisome position: 64.93
GC content: 46.87
Gene sequence:
>2445_bases ATGAAAATAAAATGGATAGTGGGGGGGCTGTTATGGGCAAGTTCTTACTTGCAGGCTGCCGCACAGGAATATAAACTGTG GTATGACGAACCCGCTCAGGTTTGGACTGAAGCGCTTCCGCTGGGTAACGGGCGGTTGGGAGCGATGGTATTCGGCAATC CCGGTGTGGAGCATATCCAGTTGAACGAAGAAACTATTTGGGCAGGACGTCCCAATAATAATGCTAATCCCGATGCGTTG GAATATATTCCCAAAGTGCGCCGGTTGGTGTTCGAGGGAAAATATCTTGAAGCACAAACGTTGGCTACCGAGAAAGTAAT GGCGAAGACCAATAGCGGTATGCCCTATCAATCGTTTGGCGATCTGCATATTTCTTTTCCGGGGCATACACGTTATTCCG ATTACTATAGGGAACTGAGCCTGGATTCAGCTCGTACCATCGTGCGTTATAAGGTGGACGGGGTGACTTATCAGCGTGAA ACACTGACGTCGTTTGCCGATCAGGTAGTTATGGTGCGTCTTACTGCCAGCCAACCCGGAAAGATTACTTGTAACGCCAA TCTTACTACTCCGCATCAGGATGTGATGGTTGCGACGGAAGGGGAGGAGGTTACCCTTTCGGGCGTATCTTCCTGGCATG AAGGACTCAAAGGGAAGGTTGAATTTCAGGGACGTATGACTGCACGTACTCAGGGAGGAACCCGGTCTTGTCGTGACGGA GTCTTGAGTATAGAAGGGGCGGACGAGGCTGTGATTTATATTTCCATTGCTACCAACTTTACTAATTACAAGGATATAAC AGGTAACCAAGTGGAGCGTGCGAAGAACTATCTGCGCCGGGCTGTAAGTAAAGATTATATGACATCACGTAAGGCACACG TCGATTTTTTCAAGCAATATATGGACCGTGTCTCTTTGGATTTAGGCATAGACAAATATGCAGGGGTAACCACTGATATG CGTGTACAGAATTTCAAGGAAACGAAGGATGATTTTCTGGTGGCCACTTATTTCCGTTTCGGCCGCTATCTGTTGATTTG TTCTTCACAGCCGGGTGGGCAGCCTGCTAATTTGCAAGGCATTTGGAATGATAAATTATTTCCTTCCTGGGATAGTAAAT ACACGTGTAATATCAATGTTGAAATGAACTATTGGCCGGCCGAAGTGACGAATCTCAGCGAATTGCACGAGCCTTTGATA CAACTGATCCGTGAAGTGAGTGAAACAGGGCGTGAGTCGGCCAAGATTATGTATGGGGCGGATGGCTGGGTATTGCATCA CAATACGGATATATGGCGTGTTACCGGAGCTATAGACAAGGCTCCGTCGGGATTATGGCCTACGGGTGGAGCCTGGCTGT GCCGTCATTTGTGGGAACGTTATCTTTATACAGGCGATATGGAGTTTCTCCGTTCGGCTTATCCTATCATGAAAGAAGCC GGTAAGTTTTTTGATGAAATCATGGTGAAGGAACCGTTACATAACTGGTTGGTGGTATGCCCGAGCAATTCTCCGGAGAA TACTCATGCGGGCAGTAACGGGAAAGCGACTACGGCTGCCGGGTGTACTTTGGATAACCAGCTGATATTCGATTTGTGGA ATCAGATAATCACGACCGCCCGTCTGTTGGGTACGGATGCTGAATTTGCCACCCGTTTGGAACAGCGTTTAAAGGAAATG GCGCCCATGCAGATAGGACGTTGGGGGCAATTGCAGGAATGGATGATGGATTGGGACAATCCGCAGGATGTGCACCGTCA TGTGTCACACCTTTATGGTTTGTTCCCCGGTAATCAGATTTCTCCTTACCGTACTCCCGAATTGTTTGATGCGGCACGTA CTTCGCTGATTCATCGTGGCGATCCGTCTACCGGATGGAGTATGGGATGGAAGGTATGTTTGTGGGCCCGTCTGTTGGAT GGTGACCATGCTTATAAACTGATAACCGATCAGTTGACTCTCGTACGTAACGAGAAGAAAAAAGGAGGAACTTATCCTAA TTTGTTTGATGCCCATCCACCTTTTCAGATTGACGGTAATTTTGGTTGTACGGCGGGTATCGTAGAAATGCTGATGCAGA GCCACGATGGTTTTATTTATTTACTTCCCGCATTGCCGGCGCAATGGAAAGAGGGAAGCGTGAGCGGGATTATAGCTCGT GGAGGTTTTGAATTGGATTTGAGTTGGAAGAATGGTAAAGTGAGCCGGTTGGTGGTGAAATCCCGTAATGGGGGAAACTG TCGTTTGCGTTCTTTAAATCCGCTGGCAGGCAAAGGGCTGAGAAAGGCAAAAGGAGAGAATCCGAATAAATTGTATGCCA TACCCGAAATCTTACAGCCGATTATAAATAAAGAAGCGAAATTGAATAAAGTTGAGTTGAAAAAAACTTATCTTTATGAT CTGGAAACCAAAGCAGGTGAAGAGTATATATTCTTAGGTAAGTGA
Upstream 100 bases:
>100_bases CCAGGGAAAGTTTTTTCATGATATTTACTTTTTTATTTCTTTCCACAGAGTACATCCGTCTTCTTTTTTCGTCTCCCTTT AATAAAAGCTAGAGATCAAT
Downstream 100 bases:
>100_bases TGATTCTTGCATTGATTGTAAGGATGAAAAATAGTAAAAAGAAGAAATATGAAAAGAACAGGATTAAACATTATTTGCTC ATTGTTGCTGGCAGGTGGAA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Trehalose And Maltose Hydrolase-Like Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Fibronectin Type III Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Glycosyl Hydrolase Family Protein; 1 2-A-L-Fucosidase
Number of amino acids: Translated: 814; Mature: 814
Protein sequence:
>814_residues MKIKWIVGGLLWASSYLQAAAQEYKLWYDEPAQVWTEALPLGNGRLGAMVFGNPGVEHIQLNEETIWAGRPNNNANPDAL EYIPKVRRLVFEGKYLEAQTLATEKVMAKTNSGMPYQSFGDLHISFPGHTRYSDYYRELSLDSARTIVRYKVDGVTYQRE TLTSFADQVVMVRLTASQPGKITCNANLTTPHQDVMVATEGEEVTLSGVSSWHEGLKGKVEFQGRMTARTQGGTRSCRDG VLSIEGADEAVIYISIATNFTNYKDITGNQVERAKNYLRRAVSKDYMTSRKAHVDFFKQYMDRVSLDLGIDKYAGVTTDM RVQNFKETKDDFLVATYFRFGRYLLICSSQPGGQPANLQGIWNDKLFPSWDSKYTCNINVEMNYWPAEVTNLSELHEPLI QLIREVSETGRESAKIMYGADGWVLHHNTDIWRVTGAIDKAPSGLWPTGGAWLCRHLWERYLYTGDMEFLRSAYPIMKEA GKFFDEIMVKEPLHNWLVVCPSNSPENTHAGSNGKATTAAGCTLDNQLIFDLWNQIITTARLLGTDAEFATRLEQRLKEM APMQIGRWGQLQEWMMDWDNPQDVHRHVSHLYGLFPGNQISPYRTPELFDAARTSLIHRGDPSTGWSMGWKVCLWARLLD GDHAYKLITDQLTLVRNEKKKGGTYPNLFDAHPPFQIDGNFGCTAGIVEMLMQSHDGFIYLLPALPAQWKEGSVSGIIAR GGFELDLSWKNGKVSRLVVKSRNGGNCRLRSLNPLAGKGLRKAKGENPNKLYAIPEILQPIINKEAKLNKVELKKTYLYD LETKAGEEYIFLGK
Sequences:
>Translated_814_residues MKIKWIVGGLLWASSYLQAAAQEYKLWYDEPAQVWTEALPLGNGRLGAMVFGNPGVEHIQLNEETIWAGRPNNNANPDAL EYIPKVRRLVFEGKYLEAQTLATEKVMAKTNSGMPYQSFGDLHISFPGHTRYSDYYRELSLDSARTIVRYKVDGVTYQRE TLTSFADQVVMVRLTASQPGKITCNANLTTPHQDVMVATEGEEVTLSGVSSWHEGLKGKVEFQGRMTARTQGGTRSCRDG VLSIEGADEAVIYISIATNFTNYKDITGNQVERAKNYLRRAVSKDYMTSRKAHVDFFKQYMDRVSLDLGIDKYAGVTTDM RVQNFKETKDDFLVATYFRFGRYLLICSSQPGGQPANLQGIWNDKLFPSWDSKYTCNINVEMNYWPAEVTNLSELHEPLI QLIREVSETGRESAKIMYGADGWVLHHNTDIWRVTGAIDKAPSGLWPTGGAWLCRHLWERYLYTGDMEFLRSAYPIMKEA GKFFDEIMVKEPLHNWLVVCPSNSPENTHAGSNGKATTAAGCTLDNQLIFDLWNQIITTARLLGTDAEFATRLEQRLKEM APMQIGRWGQLQEWMMDWDNPQDVHRHVSHLYGLFPGNQISPYRTPELFDAARTSLIHRGDPSTGWSMGWKVCLWARLLD GDHAYKLITDQLTLVRNEKKKGGTYPNLFDAHPPFQIDGNFGCTAGIVEMLMQSHDGFIYLLPALPAQWKEGSVSGIIAR GGFELDLSWKNGKVSRLVVKSRNGGNCRLRSLNPLAGKGLRKAKGENPNKLYAIPEILQPIINKEAKLNKVELKKTYLYD LETKAGEEYIFLGK >Mature_814_residues MKIKWIVGGLLWASSYLQAAAQEYKLWYDEPAQVWTEALPLGNGRLGAMVFGNPGVEHIQLNEETIWAGRPNNNANPDAL EYIPKVRRLVFEGKYLEAQTLATEKVMAKTNSGMPYQSFGDLHISFPGHTRYSDYYRELSLDSARTIVRYKVDGVTYQRE TLTSFADQVVMVRLTASQPGKITCNANLTTPHQDVMVATEGEEVTLSGVSSWHEGLKGKVEFQGRMTARTQGGTRSCRDG VLSIEGADEAVIYISIATNFTNYKDITGNQVERAKNYLRRAVSKDYMTSRKAHVDFFKQYMDRVSLDLGIDKYAGVTTDM RVQNFKETKDDFLVATYFRFGRYLLICSSQPGGQPANLQGIWNDKLFPSWDSKYTCNINVEMNYWPAEVTNLSELHEPLI QLIREVSETGRESAKIMYGADGWVLHHNTDIWRVTGAIDKAPSGLWPTGGAWLCRHLWERYLYTGDMEFLRSAYPIMKEA GKFFDEIMVKEPLHNWLVVCPSNSPENTHAGSNGKATTAAGCTLDNQLIFDLWNQIITTARLLGTDAEFATRLEQRLKEM APMQIGRWGQLQEWMMDWDNPQDVHRHVSHLYGLFPGNQISPYRTPELFDAARTSLIHRGDPSTGWSMGWKVCLWARLLD GDHAYKLITDQLTLVRNEKKKGGTYPNLFDAHPPFQIDGNFGCTAGIVEMLMQSHDGFIYLLPALPAQWKEGSVSGIIAR GGFELDLSWKNGKVSRLVVKSRNGGNCRLRSLNPLAGKGLRKAKGENPNKLYAIPEILQPIINKEAKLNKVELKKTYLYD LETKAGEEYIFLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92009; Mature: 92009
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKWIVGGLLWASSYLQAAAQEYKLWYDEPAQVWTEALPLGNGRLGAMVFGNPGVEHIQ CEEEEEEHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEE LNEETIWAGRPNNNANPDALEYIPKVRRLVFEGKYLEAQTLATEKVMAKTNSGMPYQSFG ECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCC DLHISFPGHTRYSDYYRELSLDSARTIVRYKVDGVTYQRETLTSFADQVVMVRLTASQPG CEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCEEEHHHHHHHHHCCEEEEEEECCCCC KITCNANLTTPHQDVMVATEGEEVTLSGVSSWHEGLKGKVEFQGRMTARTQGGTRSCRDG EEEEECCCCCCCCCEEEEECCCEEEECCHHHHHHCCCCEEEEEEEEEEECCCCCCHHHCC VLSIEGADEAVIYISIATNFTNYKDITGNQVERAKNYLRRAVSKDYMTSRKAHVDFFKQY EEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDRVSLDLGIDKYAGVTTDMRVQNFKETKDDFLVATYFRFGRYLLICSSQPGGQPANLQG HHHHHHHCCCHHHCCCCCCHHHHHHHCCCCCEEEHHHHHHCCEEEEECCCCCCCCCCCCE IWNDKLFPSWDSKYTCNINVEMNYWPAEVTNLSELHEPLIQLIREVSETGRESAKIMYGA EECCCCCCCCCCEEEEEEEEEEEECCHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC DGWVLHHNTDIWRVTGAIDKAPSGLWPTGGAWLCRHLWERYLYTGDMEFLRSAYPIMKEA CEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GKFFDEIMVKEPLHNWLVVCPSNSPENTHAGSNGKATTAAGCTLDNQLIFDLWNQIITTA HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH RLLGTDAEFATRLEQRLKEMAPMQIGRWGQLQEWMMDWDNPQDVHRHVSHLYGLFPGNQI HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC SPYRTPELFDAARTSLIHRGDPSTGWSMGWKVCLWARLLDGDHAYKLITDQLTLVRNEKK CCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH KGGTYPNLFDAHPPFQIDGNFGCTAGIVEMLMQSHDGFIYLLPALPAQWKEGSVSGIIAR CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEE GGFELDLSWKNGKVSRLVVKSRNGGNCRLRSLNPLAGKGLRKAKGENPNKLYAIPEILQP CCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHCCCCCCEEEECHHHHHH IINKEAKLNKVELKKTYLYDLETKAGEEYIFLGK HHCCCCCCCCEEEEEEEEEEEECCCCCCEEEECC >Mature Secondary Structure MKIKWIVGGLLWASSYLQAAAQEYKLWYDEPAQVWTEALPLGNGRLGAMVFGNPGVEHIQ CEEEEEEHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEE LNEETIWAGRPNNNANPDALEYIPKVRRLVFEGKYLEAQTLATEKVMAKTNSGMPYQSFG ECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCC DLHISFPGHTRYSDYYRELSLDSARTIVRYKVDGVTYQRETLTSFADQVVMVRLTASQPG CEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCEEEHHHHHHHHHCCEEEEEEECCCCC KITCNANLTTPHQDVMVATEGEEVTLSGVSSWHEGLKGKVEFQGRMTARTQGGTRSCRDG EEEEECCCCCCCCCEEEEECCCEEEECCHHHHHHCCCCEEEEEEEEEEECCCCCCHHHCC VLSIEGADEAVIYISIATNFTNYKDITGNQVERAKNYLRRAVSKDYMTSRKAHVDFFKQY EEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDRVSLDLGIDKYAGVTTDMRVQNFKETKDDFLVATYFRFGRYLLICSSQPGGQPANLQG HHHHHHHCCCHHHCCCCCCHHHHHHHCCCCCEEEHHHHHHCCEEEEECCCCCCCCCCCCE IWNDKLFPSWDSKYTCNINVEMNYWPAEVTNLSELHEPLIQLIREVSETGRESAKIMYGA EECCCCCCCCCCEEEEEEEEEEEECCHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC DGWVLHHNTDIWRVTGAIDKAPSGLWPTGGAWLCRHLWERYLYTGDMEFLRSAYPIMKEA CEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GKFFDEIMVKEPLHNWLVVCPSNSPENTHAGSNGKATTAAGCTLDNQLIFDLWNQIITTA HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH RLLGTDAEFATRLEQRLKEMAPMQIGRWGQLQEWMMDWDNPQDVHRHVSHLYGLFPGNQI HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC SPYRTPELFDAARTSLIHRGDPSTGWSMGWKVCLWARLLDGDHAYKLITDQLTLVRNEKK CCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH KGGTYPNLFDAHPPFQIDGNFGCTAGIVEMLMQSHDGFIYLLPALPAQWKEGSVSGIIAR CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEE GGFELDLSWKNGKVSRLVVKSRNGGNCRLRSLNPLAGKGLRKAKGENPNKLYAIPEILQP CCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHCCCCCCEEEECHHHHHH IINKEAKLNKVELKKTYLYDLETKAGEEYIFLGK HHCCCCCCCCEEEEEEEEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA