| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is dcp [H]
Identifier: 150005158
GI number: 150005158
Start: 3337032
End: 3339074
Strand: Reverse
Name: dcp [H]
Synonym: BVU_2627
Alternate gene names: 150005158
Gene position: 3339074-3337032 (Counterclockwise)
Preceding gene: 150005159
Following gene: 150005157
Centisome position: 64.67
GC content: 43.66
Gene sequence:
>2043_bases ATGACTGAAAATAAAAATCCATTTTTAAAACCCTATAACACCCCTCATGACACGGCTCCGTTCCATCTTATCAAGATAGA ACATTATGAACCTGCCTTGTTGGAAGGAATGAAAGAACAAAATGAGGAAATTGATGCAATTGTCAATAATCCCGAAGCAC CGACTTTCCAAAATACCATTGTTGCTTTGGAAAAATCAGGTGCGTTGCTAGACCGCGTAACTACTGTTTTCGGCAATTTG ATGAGTGCCGAGACCAGTGACGAGATGCAGGAATTGGCAGAAAAAATGATGCCCGTACTGTCCGAACACAGCAACAACAT CAGTCTGAATGAAAAACTTTTTGCTCGTATAAAAGCCGTATACGAACAAAAAGACCAGTTACAACTGAAAGGTGAAGACG CCCAACTGCTGCAAAAGACATACGATGGTTTTGTAAGAAGCGGTGCCAACCTGACCGGTGAGGCAAAAGAAAAGTTCCGC CAACTGAATACCGAATTAAGCATATTGACCTTACGTTTTTCTCAGAATCTGTTGAAAGAAACAAATAACTACGAATTGGC TTTGACGGAAAAACAATTGGAAGGATTACCCGAAAGTTCATTGGAAAGTTATGCTCAAACAGCAAAGGATAAGGGAAAAG AAGGCAGCATCATTACATTGGATGCTCCCAGTTTTGTTCCTTTCATGAAATATTGTGATGACCGTTCACTGCGCAGAGAA GTCTATATGGCTTATAATACCCAATGTACACACAATAACGAATACAACAATGTGGACATCATCAAGCAATTGGTAAACAT TCGCATGGAACTGGCTCATTTACTAGGCTTCTCCACTTTTGCCGAGTATAAACTGAAAAAGCGCATGGCCGAAACGAGTG ATGCCGTATACAAACTGCTCAACCAATTACTGGATGCCTATACCCCTGCCGCCCTAAAGGAAGTGGCAGAAGTTGAAGCA TTGGCACGCGAAATGGAAGGCAATGATTTCCAGCTGATGCCATGGGATTGGGCCTATTATTCAGAAAAGCTGAAAAATAA GAAATTCAATCTGAATGAAGAAGAGCTGCGTCCTTATTTTGAGCTGAGCCAAGTAGAGAAAGGTGTATTCGGTCTGGCTA CCCGTCTGTATGGCATCACATTTAAAGAAAATAAAGAAATTCCGGTCTATCATCCCGATGTAAAAGCTTATGAAGTATTC GACAAAGACGGAAGTTTCCTGGCTGTACTTTATACAGATTTCCACCCCCGTGCCGGAAAACGTTCGGGCGCATGGATGAC CAGCTATAAGGAGCAGTGGATAGAAAACGGAGTCAACAGCCGTCCCCACGTATCCGTTACCATGAACTTCACCAAGCCAT CGGCTGGGAAACCGGCATTGCTGACTTTCTCAGAAGTAAACACTTTTCTACACGAATTCGGACACGCCTTGCACGGAATG TTTGCCAATACCACCTATTCAACCATGAGTGGTACCAGCGTATATTGGGATTTTGTGGAGCTTCCATCACAAATTATGGA AAATTTCGCCACAGAAAAAGAATTTCTCAATACATTCGCCAGACATTATCAGACGGGAGAACCCATTCCTGCCGAACTGA TCCAAAAGATTGTAGATGCATCCAATTTCAATGTGGCCTATGCCTGCCTGCGTCAAGTAAGTTTCGGCTTGCTGGATATG GCATGGTACACCCGCCGGGAAACATTTGACGGAGATGTCCGCGCTTATGAAAAAGAAGCATGGAAAAAAGCGCAAGTACT GCCCGGAGTGGAAGACACCTGCATGTCCGTACAGTTCTCACATATTATGGCGGGGGGATATTCTGCCGGATACTACAGTT ATAAATGGGCGGAAGTACTGGATGCGGATGCCTTCTCCTTATTCAAGGAAAAAGGAATCTTCAACCAGGAAGTCGCCGCT TCTTTTCGGGAGAATATTCTCTCGAAAGGAGGAACGGAACATCCGATGACCCTTTACAAACGCTTCCGTGGACAAGAACC CAGTATCCATGCCTTGCTGAAAAGAAATGGAATCATCAACTAA
Upstream 100 bases:
>100_bases TTTTAACCTAACTATTTAATATACTTTGTTAAATAAGTAAATAGAATGAGGATAGTGATGCTTTTTTTTAGCAAATTTGT AAGTCAAATAAAATAGTGCT
Downstream 100 bases:
>100_bases AAAAACAAACAATATGAAACTAAAGTCTATTCTTTATATACTAATGCTACTCCCTTTCTTATGGAGTTGCAACAATGAAG ACGATGTAGAGGAAATCTTT
Product: putative peptidyl-dipeptidase
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 680; Mature: 679
Protein sequence:
>680_residues MTENKNPFLKPYNTPHDTAPFHLIKIEHYEPALLEGMKEQNEEIDAIVNNPEAPTFQNTIVALEKSGALLDRVTTVFGNL MSAETSDEMQELAEKMMPVLSEHSNNISLNEKLFARIKAVYEQKDQLQLKGEDAQLLQKTYDGFVRSGANLTGEAKEKFR QLNTELSILTLRFSQNLLKETNNYELALTEKQLEGLPESSLESYAQTAKDKGKEGSIITLDAPSFVPFMKYCDDRSLRRE VYMAYNTQCTHNNEYNNVDIIKQLVNIRMELAHLLGFSTFAEYKLKKRMAETSDAVYKLLNQLLDAYTPAALKEVAEVEA LAREMEGNDFQLMPWDWAYYSEKLKNKKFNLNEEELRPYFELSQVEKGVFGLATRLYGITFKENKEIPVYHPDVKAYEVF DKDGSFLAVLYTDFHPRAGKRSGAWMTSYKEQWIENGVNSRPHVSVTMNFTKPSAGKPALLTFSEVNTFLHEFGHALHGM FANTTYSTMSGTSVYWDFVELPSQIMENFATEKEFLNTFARHYQTGEPIPAELIQKIVDASNFNVAYACLRQVSFGLLDM AWYTRRETFDGDVRAYEKEAWKKAQVLPGVEDTCMSVQFSHIMAGGYSAGYYSYKWAEVLDADAFSLFKEKGIFNQEVAA SFRENILSKGGTEHPMTLYKRFRGQEPSIHALLKRNGIIN
Sequences:
>Translated_680_residues MTENKNPFLKPYNTPHDTAPFHLIKIEHYEPALLEGMKEQNEEIDAIVNNPEAPTFQNTIVALEKSGALLDRVTTVFGNL MSAETSDEMQELAEKMMPVLSEHSNNISLNEKLFARIKAVYEQKDQLQLKGEDAQLLQKTYDGFVRSGANLTGEAKEKFR QLNTELSILTLRFSQNLLKETNNYELALTEKQLEGLPESSLESYAQTAKDKGKEGSIITLDAPSFVPFMKYCDDRSLRRE VYMAYNTQCTHNNEYNNVDIIKQLVNIRMELAHLLGFSTFAEYKLKKRMAETSDAVYKLLNQLLDAYTPAALKEVAEVEA LAREMEGNDFQLMPWDWAYYSEKLKNKKFNLNEEELRPYFELSQVEKGVFGLATRLYGITFKENKEIPVYHPDVKAYEVF DKDGSFLAVLYTDFHPRAGKRSGAWMTSYKEQWIENGVNSRPHVSVTMNFTKPSAGKPALLTFSEVNTFLHEFGHALHGM FANTTYSTMSGTSVYWDFVELPSQIMENFATEKEFLNTFARHYQTGEPIPAELIQKIVDASNFNVAYACLRQVSFGLLDM AWYTRRETFDGDVRAYEKEAWKKAQVLPGVEDTCMSVQFSHIMAGGYSAGYYSYKWAEVLDADAFSLFKEKGIFNQEVAA SFRENILSKGGTEHPMTLYKRFRGQEPSIHALLKRNGIIN >Mature_679_residues TENKNPFLKPYNTPHDTAPFHLIKIEHYEPALLEGMKEQNEEIDAIVNNPEAPTFQNTIVALEKSGALLDRVTTVFGNLM SAETSDEMQELAEKMMPVLSEHSNNISLNEKLFARIKAVYEQKDQLQLKGEDAQLLQKTYDGFVRSGANLTGEAKEKFRQ LNTELSILTLRFSQNLLKETNNYELALTEKQLEGLPESSLESYAQTAKDKGKEGSIITLDAPSFVPFMKYCDDRSLRREV YMAYNTQCTHNNEYNNVDIIKQLVNIRMELAHLLGFSTFAEYKLKKRMAETSDAVYKLLNQLLDAYTPAALKEVAEVEAL AREMEGNDFQLMPWDWAYYSEKLKNKKFNLNEEELRPYFELSQVEKGVFGLATRLYGITFKENKEIPVYHPDVKAYEVFD KDGSFLAVLYTDFHPRAGKRSGAWMTSYKEQWIENGVNSRPHVSVTMNFTKPSAGKPALLTFSEVNTFLHEFGHALHGMF ANTTYSTMSGTSVYWDFVELPSQIMENFATEKEFLNTFARHYQTGEPIPAELIQKIVDASNFNVAYACLRQVSFGLLDMA WYTRRETFDGDVRAYEKEAWKKAQVLPGVEDTCMSVQFSHIMAGGYSAGYYSYKWAEVLDADAFSLFKEKGIFNQEVAAS FRENILSKGGTEHPMTLYKRFRGQEPSIHALLKRNGIIN
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=587, Percent_Identity=32.5383304940375, Blast_Score=311, Evalue=9e-85, Organism=Homo sapiens, GI14149738, Length=593, Percent_Identity=31.3659359190556, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI156105687, Length=662, Percent_Identity=24.9244712990937, Blast_Score=200, Evalue=3e-51, Organism=Escherichia coli, GI1787819, Length=678, Percent_Identity=40.4129793510324, Blast_Score=477, Evalue=1e-135, Organism=Escherichia coli, GI1789913, Length=681, Percent_Identity=38.7665198237885, Blast_Score=468, Evalue=1e-133, Organism=Caenorhabditis elegans, GI32565901, Length=608, Percent_Identity=22.5328947368421, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71999758, Length=469, Percent_Identity=23.8805970149254, Blast_Score=113, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6319793, Length=652, Percent_Identity=29.601226993865, Blast_Score=270, Evalue=8e-73, Organism=Saccharomyces cerevisiae, GI6322715, Length=686, Percent_Identity=24.4897959183673, Blast_Score=173, Evalue=7e-44, Organism=Drosophila melanogaster, GI21356111, Length=574, Percent_Identity=26.3066202090592, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI20129717, Length=408, Percent_Identity=29.1666666666667, Blast_Score=182, Evalue=6e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 77748; Mature: 77617
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENKNPFLKPYNTPHDTAPFHLIKIEHYEPALLEGMKEQNEEIDAIVNNPEAPTFQNTI CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHE VALEKSGALLDRVTTVFGNLMSAETSDEMQELAEKMMPVLSEHSNNISLNEKLFARIKAV EEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH YEQKDQLQLKGEDAQLLQKTYDGFVRSGANLTGEAKEKFRQLNTELSILTLRFSQNLLKE HHHCCCEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHC TNNYELALTEKQLEGLPESSLESYAQTAKDKGKEGSIITLDAPSFVPFMKYCDDRSLRRE CCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCHHHHHH VYMAYNTQCTHNNEYNNVDIIKQLVNIRMELAHLLGFSTFAEYKLKKRMAETSDAVYKLL HHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQLLDAYTPAALKEVAEVEALAREMEGNDFQLMPWDWAYYSEKLKNKKFNLNEEELRPYF HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHH ELSQVEKGVFGLATRLYGITFKENKEIPVYHPDVKAYEVFDKDGSFLAVLYTDFHPRAGK HHHHHHHHHHHHHHHHHEEEECCCCCCCEECCCCCEEEEECCCCCEEEEEEECCCCCCCC RSGAWMTSYKEQWIENGVNSRPHVSVTMNFTKPSAGKPALLTFSEVNTFLHEFGHALHGM CCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHH FANTTYSTMSGTSVYWDFVELPSQIMENFATEKEFLNTFARHYQTGEPIPAELIQKIVDA HHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC SNFNVAYACLRQVSFGLLDMAWYTRRETFDGDVRAYEKEAWKKAQVLPGVEDTCMSVQFS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH HIMAGGYSAGYYSYKWAEVLDADAFSLFKEKGIFNQEVAASFRENILSKGGTEHPMTLYK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH RFRGQEPSIHALLKRNGIIN HHCCCCCHHHHHHHHCCCCC >Mature Secondary Structure TENKNPFLKPYNTPHDTAPFHLIKIEHYEPALLEGMKEQNEEIDAIVNNPEAPTFQNTI CCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHE VALEKSGALLDRVTTVFGNLMSAETSDEMQELAEKMMPVLSEHSNNISLNEKLFARIKAV EEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH YEQKDQLQLKGEDAQLLQKTYDGFVRSGANLTGEAKEKFRQLNTELSILTLRFSQNLLKE HHHCCCEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHC TNNYELALTEKQLEGLPESSLESYAQTAKDKGKEGSIITLDAPSFVPFMKYCDDRSLRRE CCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCHHHHHH VYMAYNTQCTHNNEYNNVDIIKQLVNIRMELAHLLGFSTFAEYKLKKRMAETSDAVYKLL HHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQLLDAYTPAALKEVAEVEALAREMEGNDFQLMPWDWAYYSEKLKNKKFNLNEEELRPYF HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHH ELSQVEKGVFGLATRLYGITFKENKEIPVYHPDVKAYEVFDKDGSFLAVLYTDFHPRAGK HHHHHHHHHHHHHHHHHEEEECCCCCCCEECCCCCEEEEECCCCCEEEEEEECCCCCCCC RSGAWMTSYKEQWIENGVNSRPHVSVTMNFTKPSAGKPALLTFSEVNTFLHEFGHALHGM CCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHH FANTTYSTMSGTSVYWDFVELPSQIMENFATEKEFLNTFARHYQTGEPIPAELIQKIVDA HHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC SNFNVAYACLRQVSFGLLDMAWYTRRETFDGDVRAYEKEAWKKAQVLPGVEDTCMSVQFS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH HIMAGGYSAGYYSYKWAEVLDADAFSLFKEKGIFNQEVAASFRENILSKGGTEHPMTLYK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH RFRGQEPSIHALLKRNGIIN HHCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]