Click here to switch to the map view.

The map label for this gene is comEB [H]

Identifier: 150005156

GI number: 150005156

Start: 3336085

End: 3336519

Strand: Reverse

Name: comEB [H]

Synonym: BVU_2625

Alternate gene names: 150005156

Gene position: 3336519-3336085 (Counterclockwise)

Preceding gene: 150005157

Following gene: 150005155

Centisome position: 64.62

GC content: 43.22

Gene sequence:

>435_bases
ATGGAAACGAAAGAAGAGAAACAACTCAAACTCGACAAACGATACATCCGCATGGCTAGTATTTGGGCGGAAAATTCATA
CTGTGAACGCCGTCAAGTAGGAGCATTGATCGTAAAAGACAAGATGATCATCTCCGACGGATATAACGGAACTCCTGCAG
GATTCGAAAATGTATGCGAAGATGACAACGGAGTCACCAAGCCTTACGTACTACACGCTGAAGCGAATGCTATCACCAAA
ATAGCACGAAGCAACAACAGCAGCGACGGAGCAACCATGTACGTCACCGCATCTCCTTGCATAGAATGTGCCAAACTCAT
CATCCAAGCAGGAATCAAACGTGTGGTTTACTCAGAAAAATACCGTTTGGAAGACGGGCTTGATTTATTGAAACGCGCAA
ATATTGAAGTAATCTATATCAATCCCAATGAATAA

Upstream 100 bases:

>100_bases
AATGCAATATTTTATCAAGGTGACAGCAATGTTTTATTGCTAGCTCCCGAAGGGAAAAAAACTTATATTCAATTTGCACA
TAATAAGCAAGACTGAAATA

Downstream 100 bases:

>100_bases
TAGCAAATAAAGATATGAGCAAAAATCGAACATCCCGTTTTATGCCGGTAATCGTTGCAGTAAGCATCGTAACCGGAATA
TTGATTGGAACTTTTTACGC

Product: deoxycytidylate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
METKEEKQLKLDKRYIRMASIWAENSYCERRQVGALIVKDKMIISDGYNGTPAGFENVCEDDNGVTKPYVLHAEANAITK
IARSNNSSDGATMYVTASPCIECAKLIIQAGIKRVVYSEKYRLEDGLDLLKRANIEVIYINPNE

Sequences:

>Translated_144_residues
METKEEKQLKLDKRYIRMASIWAENSYCERRQVGALIVKDKMIISDGYNGTPAGFENVCEDDNGVTKPYVLHAEANAITK
IARSNNSSDGATMYVTASPCIECAKLIIQAGIKRVVYSEKYRLEDGLDLLKRANIEVIYINPNE
>Mature_144_residues
METKEEKQLKLDKRYIRMASIWAENSYCERRQVGALIVKDKMIISDGYNGTPAGFENVCEDDNGVTKPYVLHAEANAITK
IARSNNSSDGATMYVTASPCIECAKLIIQAGIKRVVYSEKYRLEDGLDLLKRANIEVIYINPNE

Specific function: Dispensable for transformability [H]

COG id: COG2131

COG function: function code F; Deoxycytidylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI61742819, Length=133, Percent_Identity=40.6015037593985, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI61742821, Length=133, Percent_Identity=40.6015037593985, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17557019, Length=117, Percent_Identity=38.4615384615385, Blast_Score=73, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6321938, Length=136, Percent_Identity=36.0294117647059, Blast_Score=89, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24667298, Length=136, Percent_Identity=38.2352941176471, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24667302, Length=136, Percent_Identity=38.2352941176471, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR013404
- InterPro:   IPR015517
- InterPro:   IPR016193
- InterPro:   IPR016473 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 16211; Mature: 16211

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKEEKQLKLDKRYIRMASIWAENSYCERRQVGALIVKDKMIISDGYNGTPAGFENVCE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECEEEEECCCCCCCCCHHHHCC
DDNGVTKPYVLHAEANAITKIARSNNSSDGATMYVTASPCIECAKLIIQAGIKRVVYSEK
CCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
YRLEDGLDLLKRANIEVIYINPNE
CCCHHHHHHHHHCCEEEEEECCCC
>Mature Secondary Structure
METKEEKQLKLDKRYIRMASIWAENSYCERRQVGALIVKDKMIISDGYNGTPAGFENVCE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECEEEEECCCCCCCCCHHHHCC
DDNGVTKPYVLHAEANAITKIARSNNSSDGATMYVTASPCIECAKLIIQAGIKRVVYSEK
CCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
YRLEDGLDLLKRANIEVIYINPNE
CCCHHHHHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7968523; 8969508; 9384377 [H]