| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is purC [H]
Identifier: 150005078
GI number: 150005078
Start: 3245444
End: 3246388
Strand: Reverse
Name: purC [H]
Synonym: BVU_2543
Alternate gene names: 150005078
Gene position: 3246388-3245444 (Counterclockwise)
Preceding gene: 150005079
Following gene: 150005077
Centisome position: 62.88
GC content: 43.7
Gene sequence:
>945_bases ATGAGTAAAGCATTAACAAGAACAGACTTTAACTTTCCGGGACAGAAAAGTGTGTACCACGGCAAAGTGCGTGATGTATA CAACATCAATGACGAAAAGTTAGTAATGGTAGCTACCGACCGTATCTCCGCATTCGACGTAGTTCTGCCTGAAGGTATTC CCTACAAAGGACAAATGCTGAACCAGATTGCAGCCAAATTTCTGGATGCAACTACCGACATCTGCCCCAACTGGAAAATG GCGACTCCAGATCCTATGGTTACCGTAGGAGTTATGTGTCAAGGTTTTCCTGTGGAAATGATTGTCCGTGGTTACCTGTG CGGTAGCGCATGGCGTGCTTACAAAAACGGCGTTCGTGAAATCTGTGGTGTAAAACTTCCCGAAGGAATGAAAGAAAACC AGAAATTTCCCGAACCAATCATTACTCCAACCACTAAAGCCGAAATGGGCCTGCATGACGAAGACATCTCTAAGGAAGAA ATTCTGAAACAAGGTCTGGCCACTCCCGAAGAATACGAAATATTGGAAAAGTATACATTGGCTCTGTTCAAACGCGGTAC TGAAATCGCTGCAGAACGCGGACTGATCCTGGTAGATACCAAATACGAATTCGGTAAACACAACGGCACTATTTATCTGA TGGATGAGATCCACACTCCGGATTCAAGCCGTTATTTCTACTTGGAAGGTTATGAAGAACGCTTTGCAAAAGGCGAACCT CAAAAACAACTTTCTAAAGAGTTCGTACGCGAATGGTTGATGGAAAATGGTTTCCAAGGCAAAGAAGGACAACAAGTTCC CGAAATGACCCCGGAAATCGTTAATTCTATCAGCGAACGCTACATGGAACTGTTCGAACACATCACCGGCGAAAAATTTG TGAAAGCAGACACTGAAAATATCGCCGCACGTATAGAAAAGAACGTAACCGAATACTTGAAATAA
Upstream 100 bases:
>100_bases TTGAAGAAAAACAGAAAACCCTTCATTCATGTCATTCTGAACGAAGTGAAAAATCTGAAAACATAAAACGAATTTATTGA TTTTAATTATAAATAAAGAC
Downstream 100 bases:
>100_bases ATAAAAATGAAAAATTAAAGATTAAAAGACAGGTACAGGAATCTATCCTCCATCCTCTCCTTTTAATCTTTAATTTTCAA TTTTAATTAAACATGAACTA
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSKALTRTDFNFPGQKSVYHGKVRDVYNINDEKLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKM ATPDPMVTVGVMCQGFPVEMIVRGYLCGSAWRAYKNGVREICGVKLPEGMKENQKFPEPIITPTTKAEMGLHDEDISKEE ILKQGLATPEEYEILEKYTLALFKRGTEIAAERGLILVDTKYEFGKHNGTIYLMDEIHTPDSSRYFYLEGYEERFAKGEP QKQLSKEFVREWLMENGFQGKEGQQVPEMTPEIVNSISERYMELFEHITGEKFVKADTENIAARIEKNVTEYLK
Sequences:
>Translated_314_residues MSKALTRTDFNFPGQKSVYHGKVRDVYNINDEKLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKM ATPDPMVTVGVMCQGFPVEMIVRGYLCGSAWRAYKNGVREICGVKLPEGMKENQKFPEPIITPTTKAEMGLHDEDISKEE ILKQGLATPEEYEILEKYTLALFKRGTEIAAERGLILVDTKYEFGKHNGTIYLMDEIHTPDSSRYFYLEGYEERFAKGEP QKQLSKEFVREWLMENGFQGKEGQQVPEMTPEIVNSISERYMELFEHITGEKFVKADTENIAARIEKNVTEYLK >Mature_313_residues SKALTRTDFNFPGQKSVYHGKVRDVYNINDEKLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKMA TPDPMVTVGVMCQGFPVEMIVRGYLCGSAWRAYKNGVREICGVKLPEGMKENQKFPEPIITPTTKAEMGLHDEDISKEEI LKQGLATPEEYEILEKYTLALFKRGTEIAAERGLILVDTKYEFGKHNGTIYLMDEIHTPDSSRYFYLEGYEERFAKGEPQ KQLSKEFVREWLMENGFQGKEGQQVPEMTPEIVNSISERYMELFEHITGEKFVKADTENIAARIEKNVTEYLK
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=302, Percent_Identity=37.7483443708609, Blast_Score=183, Evalue=4e-47,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 35901; Mature: 35769
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKALTRTDFNFPGQKSVYHGKVRDVYNINDEKLVMVATDRISAFDVVLPEGIPYKGQML CCCCCCCCCCCCCCCCCEECCCCCCEECCCCCEEEEEECCCCCEEEEECCCCCCCHHHHH NQIAAKFLDATTDICPNWKMATPDPMVTVGVMCQGFPVEMIVRGYLCGSAWRAYKNGVRE HHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ICGVKLPEGMKENQKFPEPIITPTTKAEMGLHDEDISKEEILKQGLATPEEYEILEKYTL HHCCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH ALFKRGTEIAAERGLILVDTKYEFGKHNGTIYLMDEIHTPDSSRYFYLEGYEERFAKGEP HHHHCCHHHHHHCCEEEEECCHHHCCCCCEEEEEEECCCCCCCCEEEEECHHHHHCCCCC QKQLSKEFVREWLMENGFQGKEGQQVPEMTPEIVNSISERYMELFEHITGEKFVKADTEN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCHHH IAARIEKNVTEYLK HHHHHHHHHHHHCC >Mature Secondary Structure SKALTRTDFNFPGQKSVYHGKVRDVYNINDEKLVMVATDRISAFDVVLPEGIPYKGQML CCCCCCCCCCCCCCCCEECCCCCCEECCCCCEEEEEECCCCCEEEEECCCCCCCHHHHH NQIAAKFLDATTDICPNWKMATPDPMVTVGVMCQGFPVEMIVRGYLCGSAWRAYKNGVRE HHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ICGVKLPEGMKENQKFPEPIITPTTKAEMGLHDEDISKEEILKQGLATPEEYEILEKYTL HHCCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH ALFKRGTEIAAERGLILVDTKYEFGKHNGTIYLMDEIHTPDSSRYFYLEGYEERFAKGEP HHHHCCHHHHHHCCEEEEECCHHHCCCCCEEEEEEECCCCCCCCEEEEECHHHHHCCCCC QKQLSKEFVREWLMENGFQGKEGQQVPEMTPEIVNSISERYMELFEHITGEKFVKADTEN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCHHH IAARIEKNVTEYLK HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA