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The map label for this gene is kdsC [H]

Identifier: 150005032

GI number: 150005032

Start: 3197625

End: 3198143

Strand: Direct

Name: kdsC [H]

Synonym: BVU_2497

Alternate gene names: 150005032

Gene position: 3197625-3198143 (Clockwise)

Preceding gene: 150005031

Following gene: 150005033

Centisome position: 61.93

GC content: 46.44

Gene sequence:

>519_bases
ATGATAAACTATGATTTAAAGAAAATAAAGGCATTGGTATTTGATGTAGATGGGGTATTGAGTGCGGAAACTATTTATTT
GCACCCCAATGGTGAACCCATGCGTACGGTTAATATCAAGGATGGGTATGCATTGCAGTTGGCTGTGAAATGCGGGCTGC
ATGTTGCCATCATTACCGGTGGAAATACCGAGGCGGTGCGTAAGCGTTATGAGGGGCTGGGTATCAAAGATGTCTATCTG
GCTGCTGCGGTGAAGACCCGGGAGTATGCCCATTTGAAGGAAAAATATGGATTGCAGGATGAGGAGATACTCTATATGGG
CGATGATATTCCCGATTATGAAGTGATGCGTTTGTGTGGGCTGCCTTGTTGTCCTGCTGATGCGGCACCTGAGATAAAGG
AAACAGCTGTTTATATTTCTCATCGTAACGGGGGATATGGATGTGGCCGTGACGTGGTGGAACAGGTCTTGAAGGCTCAA
GGAAAATGGATGGCTCATGAAAAGGCCTTCGGGTGGTAA

Upstream 100 bases:

>100_bases
AGTCTTTGCAGGAATTGTACGAAAAGATAAGTAAAAGTATTCATAATCTCCCTTTGTCTGTCATTCAGGCAAATAAAGAG
GGAAAGAACTCATAAGTGGT

Downstream 100 bases:

>100_bases
TGAAATAAAGAAAAGTTATGTTGGAAAATTTAGAAAAATATAAAATAATCCTTGCTTCCAATTCTCCGCGCCGCAAAGAA
TTGTTATCCGGCTTAGGTAT

Product: putative hydrolase

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MINYDLKKIKALVFDVDGVLSAETIYLHPNGEPMRTVNIKDGYALQLAVKCGLHVAIITGGNTEAVRKRYEGLGIKDVYL
AAAVKTREYAHLKEKYGLQDEEILYMGDDIPDYEVMRLCGLPCCPADAAPEIKETAVYISHRNGGYGCGRDVVEQVLKAQ
GKWMAHEKAFGW

Sequences:

>Translated_172_residues
MINYDLKKIKALVFDVDGVLSAETIYLHPNGEPMRTVNIKDGYALQLAVKCGLHVAIITGGNTEAVRKRYEGLGIKDVYL
AAAVKTREYAHLKEKYGLQDEEILYMGDDIPDYEVMRLCGLPCCPADAAPEIKETAVYISHRNGGYGCGRDVVEQVLKAQ
GKWMAHEKAFGW
>Mature_172_residues
MINYDLKKIKALVFDVDGVLSAETIYLHPNGEPMRTVNIKDGYALQLAVKCGLHVAIITGGNTEAVRKRYEGLGIKDVYL
AAAVKTREYAHLKEKYGLQDEEILYMGDDIPDYEVMRLCGLPCCPADAAPEIKETAVYISHRNGGYGCGRDVVEQVLKAQ
GKWMAHEKAFGW

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Escherichia coli, GI2367202, Length=156, Percent_Identity=39.1025641025641, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 19124; Mature: 19124

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYDLKKIKALVFDVDGVLSAETIYLHPNGEPMRTVNIKDGYALQLAVKCGLHVAIITG
CCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEEEECCEEEEEEEC
GNTEAVRKRYEGLGIKDVYLAAAVKTREYAHLKEKYGLQDEEILYMGDDIPDYEVMRLCG
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCC
LPCCPADAAPEIKETAVYISHRNGGYGCGRDVVEQVLKAQGKWMAHEKAFGW
CCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MINYDLKKIKALVFDVDGVLSAETIYLHPNGEPMRTVNIKDGYALQLAVKCGLHVAIITG
CCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEEEECCEEEEEEEC
GNTEAVRKRYEGLGIKDVYLAAAVKTREYAHLKEKYGLQDEEILYMGDDIPDYEVMRLCG
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCC
LPCCPADAAPEIKETAVYISHRNGGYGCGRDVVEQVLKAQGKWMAHEKAFGW
CCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]