| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005010
Identifier: 150005010
GI number: 150005010
Start: 3176697
End: 3178034
Strand: Reverse
Name: 150005010
Synonym: BVU_2475
Alternate gene names: NA
Gene position: 3178034-3176697 (Counterclockwise)
Preceding gene: 150005011
Following gene: 150005009
Centisome position: 61.55
GC content: 32.59
Gene sequence:
>1338_bases ATGATACTTAAAAAAATAACAATTGAAAATTTCCGTTGCTTTAAAAACTATGAGGTTGATTTAACACCAGGAATTACTGT TTTTATTGGTAAAAATGGCGCAGGAAAAACTTCTCTACTAAATGCCATTCGTTATGGATTAAGTGTCTTTTTTTCCAATG ATAGCACAATGGGAGATGATTTACTTATATCAGGTAATCCCGATTTAAAAGTCATTTCAACATTAGCTACAGATTTTTAT CGAGCCCAAAATGCGGATTTACCAGCAGTTGATTTAACAATCAACATGGAAGCTGAATTTAATGATATACCTTTGAATTG GGAATACTATAAGCGTTCTACATCAGGTGCTTCGTTATTCGTTTCCAAGTATCAACAAGCATATCGTACACTTATGGCAG AATATCATAATAGCGACCAACTTCCACTGTTTGTTTTCTATTCTGATTCATTTCCACATATAGATACAAGAACCAGCGAT TTTGCAAAAAAAGCTATTAAGGAACAAGGATATATTATCAGGAATTTTGCTTATTACAAATGGAATTCAGAAGTATCATG TACATCTATCTGGCAAAATAGATTCATTAATTCCATGCTAAAACAAATTTCCCTTAATGATAGTGACCCGTTAAATTCTA AGGAAGTAGAATATATAAAAAATAAATTGCGCACTTTTTCTGAACCTATCAATTCTGCGTTAGAAGAAAAGGATGATTTT GAAATAAAAGATTTCTTTCCGGTTGTAGATGATAAGACGCTATCATTATATCTGCGATTAAAAAATGAACGGGACGTTAT CTTTGATAATTTACCTGCTGGATATAAAAGACTATACTCCATTGCTTTTGATTTGGCTTATAGATTATATATTTTACGGA AAACAAACGAGGAAGACCCAAAAGGTATTGCCATAATTGATGAAATAGACCTCCATTTACATCCTTCTTTGGAACAAGAA GTGTTAGCTCGTCTGAAAAAAACATTTCCAAGTATTCAATTTATTGTATCTACACATTCTCCAATGGTACTCTCCAATCT TAAAGTCAAAGATACGGGAAATATGATTTATAGAATGCAGGCAGACGAAGATACACCAAATGCATTGCCTAATTTATATG GCGTGGATTATTCTGCTGCTGTTTATGATTTTATGGGAACTCCTTATGCAGACAATGAGGTTAAAGAAGAAATAGAAGCC ATCTTAAGGCTTTCAAGAAGAGGTAAGCCGGAATTAGTAGAAAAAAGGAAAGAAGAACTTAAATCTATGGTTTCGGAGGA ACAATACATAAATATTATCTCTAAAATAAACTCTCAACTGGCAGAGGACAAATACTAA
Upstream 100 bases:
>100_bases AGTCTAAATTTGCAAACAATAATCAGATTATGAAGTTTTATATTAGAAAATCACTAACTTTGTGAATATTATATCCATAG ACAGAAAAAAAGAAAATAAT
Downstream 100 bases:
>100_bases TAAAGAATATGCAATTTATCAATAAATTCAAATATAAGAGGAAAGGACACCGAATTATCAAGGCTTTCATTAAAGATAAG TGGAACAATGATATTCAAAG
Product: putative antigen PgaA
Products: NA
Alternate protein names: SMC Domain Protein; AAA ATPase; SMC Domain-Containing Protein; Antigen PgaA; RecF/RecN/SMC N Terminal Domain; PgaA Protein; RecF/RecN/SMC Family Protein
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MILKKITIENFRCFKNYEVDLTPGITVFIGKNGAGKTSLLNAIRYGLSVFFSNDSTMGDDLLISGNPDLKVISTLATDFY RAQNADLPAVDLTINMEAEFNDIPLNWEYYKRSTSGASLFVSKYQQAYRTLMAEYHNSDQLPLFVFYSDSFPHIDTRTSD FAKKAIKEQGYIIRNFAYYKWNSEVSCTSIWQNRFINSMLKQISLNDSDPLNSKEVEYIKNKLRTFSEPINSALEEKDDF EIKDFFPVVDDKTLSLYLRLKNERDVIFDNLPAGYKRLYSIAFDLAYRLYILRKTNEEDPKGIAIIDEIDLHLHPSLEQE VLARLKKTFPSIQFIVSTHSPMVLSNLKVKDTGNMIYRMQADEDTPNALPNLYGVDYSAAVYDFMGTPYADNEVKEEIEA ILRLSRRGKPELVEKRKEELKSMVSEEQYINIISKINSQLAEDKY
Sequences:
>Translated_445_residues MILKKITIENFRCFKNYEVDLTPGITVFIGKNGAGKTSLLNAIRYGLSVFFSNDSTMGDDLLISGNPDLKVISTLATDFY RAQNADLPAVDLTINMEAEFNDIPLNWEYYKRSTSGASLFVSKYQQAYRTLMAEYHNSDQLPLFVFYSDSFPHIDTRTSD FAKKAIKEQGYIIRNFAYYKWNSEVSCTSIWQNRFINSMLKQISLNDSDPLNSKEVEYIKNKLRTFSEPINSALEEKDDF EIKDFFPVVDDKTLSLYLRLKNERDVIFDNLPAGYKRLYSIAFDLAYRLYILRKTNEEDPKGIAIIDEIDLHLHPSLEQE VLARLKKTFPSIQFIVSTHSPMVLSNLKVKDTGNMIYRMQADEDTPNALPNLYGVDYSAAVYDFMGTPYADNEVKEEIEA ILRLSRRGKPELVEKRKEELKSMVSEEQYINIISKINSQLAEDKY >Mature_445_residues MILKKITIENFRCFKNYEVDLTPGITVFIGKNGAGKTSLLNAIRYGLSVFFSNDSTMGDDLLISGNPDLKVISTLATDFY RAQNADLPAVDLTINMEAEFNDIPLNWEYYKRSTSGASLFVSKYQQAYRTLMAEYHNSDQLPLFVFYSDSFPHIDTRTSD FAKKAIKEQGYIIRNFAYYKWNSEVSCTSIWQNRFINSMLKQISLNDSDPLNSKEVEYIKNKLRTFSEPINSALEEKDDF EIKDFFPVVDDKTLSLYLRLKNERDVIFDNLPAGYKRLYSIAFDLAYRLYILRKTNEEDPKGIAIIDEIDLHLHPSLEQE VLARLKKTFPSIQFIVSTHSPMVLSNLKVKDTGNMIYRMQADEDTPNALPNLYGVDYSAAVYDFMGTPYADNEVKEEIEA ILRLSRRGKPELVEKRKEELKSMVSEEQYINIISKINSQLAEDKY
Specific function: Unknown
COG id: COG3950
COG function: function code R; Predicted ATP-binding protein involved in virulence
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51348; Mature: 51348
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKKITIENFRCFKNYEVDLTPGITVFIGKNGAGKTSLLNAIRYGLSVFFSNDSTMGDD CCEEEEECCCEEEECCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHEEEECCCCCCCCC LLISGNPDLKVISTLATDFYRAQNADLPAVDLTINMEAEFNDIPLNWEYYKRSTSGASLF EEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCHHHH VSKYQQAYRTLMAEYHNSDQLPLFVFYSDSFPHIDTRTSDFAKKAIKEQGYIIRNFAYYK HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEE WNSEVSCTSIWQNRFINSMLKQISLNDSDPLNSKEVEYIKNKLRTFSEPINSALEEKDDF ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC EIKDFFPVVDDKTLSLYLRLKNERDVIFDNLPAGYKRLYSIAFDLAYRLYILRKTNEEDP CHHHCCCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCCCC KGIAIIDEIDLHLHPSLEQEVLARLKKTFPSIQFIVSTHSPMVLSNLKVKDTGNMIYRMQ CCEEEEEEECEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEEECEEEEECCCEEEEEE ADEDTPNALPNLYGVDYSAAVYDFMGTPYADNEVKEEIEAILRLSRRGKPELVEKRKEEL CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KSMVSEEQYINIISKINSQLAEDKY HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILKKITIENFRCFKNYEVDLTPGITVFIGKNGAGKTSLLNAIRYGLSVFFSNDSTMGDD CCEEEEECCCEEEECCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHEEEECCCCCCCCC LLISGNPDLKVISTLATDFYRAQNADLPAVDLTINMEAEFNDIPLNWEYYKRSTSGASLF EEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCHHHH VSKYQQAYRTLMAEYHNSDQLPLFVFYSDSFPHIDTRTSDFAKKAIKEQGYIIRNFAYYK HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEE WNSEVSCTSIWQNRFINSMLKQISLNDSDPLNSKEVEYIKNKLRTFSEPINSALEEKDDF ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC EIKDFFPVVDDKTLSLYLRLKNERDVIFDNLPAGYKRLYSIAFDLAYRLYILRKTNEEDP CHHHCCCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCCCC KGIAIIDEIDLHLHPSLEQEVLARLKKTFPSIQFIVSTHSPMVLSNLKVKDTGNMIYRMQ CCEEEEEEECEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEEECEEEEECCCEEEEEE ADEDTPNALPNLYGVDYSAAVYDFMGTPYADNEVKEEIEAILRLSRRGKPELVEKRKEEL CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KSMVSEEQYINIISKINSQLAEDKY HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA