| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005000
Identifier: 150005000
GI number: 150005000
Start: 3166066
End: 3167037
Strand: Reverse
Name: 150005000
Synonym: BVU_2465
Alternate gene names: NA
Gene position: 3167037-3166066 (Counterclockwise)
Preceding gene: 150005001
Following gene: 150004999
Centisome position: 61.34
GC content: 51.85
Gene sequence:
>972_bases ATGATGAATATGAATGAAGCGAAGCAGATACGCATAGAGGAATATCTGCACAGTCTTGGATACAGTCCGGTAAGGCAACA GGGTGGTAGTCTATGGTACAACTCACCGTTCAGGGACGAACAGGAACCCTCCTTCAAGGTGAACACCGAACGCAACCTAT GGTATGATTTTGGCGCAGGCAAAGGTGGTAATATCATCGCACTGGCACAGGAGCTATACGCATCCGACAGTCTGCCCTAC CTCTTGGAAAGGATAAGGGAGCAGGCACAAAACGTGCGCCCGGTCTCTTTCTCTTTTGGCAAGCAACCCTTATCAAAGCC GAGTTTCCGGCAGTTGGAGGTAGTACCGCTCTCCTCTCCCGCCCTGTATGCCTACCTGCGGCAAAGGGGAATAAATACGG AACTGGCAAAAAGAGAATGCAGGGAGGTCCGCTATCTGAACGGGGAAACCCCATACTATGCTATAGGCTTCCCCAACCGT TCGGGAGGATACGAGATACGCAACAAGCATTTCAAGGGATGCATAGCACCGAAGGACATCACCCATATACGACAATCGGA GTCGAAGGAGGCATGCTACATCTTCGAGGGATTCATGGACTACCTCTCTTTCCTCACCCTGCGGCTGGAAAGGTGTCCCG ACCGTCCCGAACTTGACGGACAGGACTACATCGTACTGAACTCGACTTCCGACCTTTCCAAAGCAATCCGACCGTTGGGC GGTTATGAAAGCATCCATTGTTTCCTTGACAACGACAAGGCGGGAATCGAGGCCGTTCAGGAGTTGCAAAAAGAGTACGG GCTACGCATACGGGACACATCGCACATATACGAAGGGTACAACGATCTGAACGACTTCCTGCGGGATAAAAGGTCAGGAC AGGCGCAACGGCAGCAAGAGAAACCGGAAGCGGAAAAAAGGCAACGGCAGACAGAGCAGCCGAAGAAGAAAGGCAAAGGG ATCAGGATGTAG
Upstream 100 bases:
>100_bases GGCATATATATAGCAAAGTAAAGTAAAGCGGATGCAGCCCGTAACACATGAAAGGGTACGGGCGAAAAACCCAAAAACAA TATCTACTTAAAACAGAAAT
Downstream 100 bases:
>100_bases CCGCACAGCCACCGGAAGGCTTTGAAAAAAGCCATAGCTCATTAGGGCTTTTTCTTAACGCAATGCACACATTGCTAAAA AAGCCCCAACGAGCCATAGG
Product: DNA primase
Products: NA
Alternate protein names: Mobilizable Transposon Excision Protein; TraP Protein; Mobilizable Transposon Protein; TransposoN-Related/Mobilization Protein; Transposon-Related/Mobilisation Protein; Conjugal Transfer Protein TraP; Transposon-Related/Mobilization Protein; Mobilizable Transposon; Conserved Protein Found In Conjugate Transposon TraP; Mobilizable Transposon Protein Excision Protein
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MMNMNEAKQIRIEEYLHSLGYSPVRQQGGSLWYNSPFRDEQEPSFKVNTERNLWYDFGAGKGGNIIALAQELYASDSLPY LLERIREQAQNVRPVSFSFGKQPLSKPSFRQLEVVPLSSPALYAYLRQRGINTELAKRECREVRYLNGETPYYAIGFPNR SGGYEIRNKHFKGCIAPKDITHIRQSESKEACYIFEGFMDYLSFLTLRLERCPDRPELDGQDYIVLNSTSDLSKAIRPLG GYESIHCFLDNDKAGIEAVQELQKEYGLRIRDTSHIYEGYNDLNDFLRDKRSGQAQRQQEKPEAEKRQRQTEQPKKKGKG IRM
Sequences:
>Translated_323_residues MMNMNEAKQIRIEEYLHSLGYSPVRQQGGSLWYNSPFRDEQEPSFKVNTERNLWYDFGAGKGGNIIALAQELYASDSLPY LLERIREQAQNVRPVSFSFGKQPLSKPSFRQLEVVPLSSPALYAYLRQRGINTELAKRECREVRYLNGETPYYAIGFPNR SGGYEIRNKHFKGCIAPKDITHIRQSESKEACYIFEGFMDYLSFLTLRLERCPDRPELDGQDYIVLNSTSDLSKAIRPLG GYESIHCFLDNDKAGIEAVQELQKEYGLRIRDTSHIYEGYNDLNDFLRDKRSGQAQRQQEKPEAEKRQRQTEQPKKKGKG IRM >Mature_323_residues MMNMNEAKQIRIEEYLHSLGYSPVRQQGGSLWYNSPFRDEQEPSFKVNTERNLWYDFGAGKGGNIIALAQELYASDSLPY LLERIREQAQNVRPVSFSFGKQPLSKPSFRQLEVVPLSSPALYAYLRQRGINTELAKRECREVRYLNGETPYYAIGFPNR SGGYEIRNKHFKGCIAPKDITHIRQSESKEACYIFEGFMDYLSFLTLRLERCPDRPELDGQDYIVLNSTSDLSKAIRPLG GYESIHCFLDNDKAGIEAVQELQKEYGLRIRDTSHIYEGYNDLNDFLRDKRSGQAQRQQEKPEAEKRQRQTEQPKKKGKG IRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37436; Mature: 37436
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNMNEAKQIRIEEYLHSLGYSPVRQQGGSLWYNSPFRDEQEPSFKVNTERNLWYDFGAG CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCCCCCCCEEEECCCCEEEECCCC KGGNIIALAQELYASDSLPYLLERIREQAQNVRPVSFSFGKQPLSKPSFRQLEVVPLSSP CCCCEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCH ALYAYLRQRGINTELAKRECREVRYLNGETPYYAIGFPNRSGGYEIRNKHFKGCIAPKDI HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHCCCCCCCCCCCHHH THIRQSESKEACYIFEGFMDYLSFLTLRLERCPDRPELDGQDYIVLNSTSDLSKAIRPLG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHCCC GYESIHCFLDNDKAGIEAVQELQKEYGLRIRDTSHIYEGYNDLNDFLRDKRSGQAQRQQE CCCEEEEEECCCCHHHHHHHHHHHHHCCEECCHHHHHHCHHHHHHHHHHHHCCHHHHHHC KPEAEKRQRQTEQPKKKGKGIRM CCHHHHHHHHHHCHHHHCCCCCC >Mature Secondary Structure MMNMNEAKQIRIEEYLHSLGYSPVRQQGGSLWYNSPFRDEQEPSFKVNTERNLWYDFGAG CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCCCCCCCEEEECCCCEEEECCCC KGGNIIALAQELYASDSLPYLLERIREQAQNVRPVSFSFGKQPLSKPSFRQLEVVPLSSP CCCCEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCH ALYAYLRQRGINTELAKRECREVRYLNGETPYYAIGFPNRSGGYEIRNKHFKGCIAPKDI HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHCCCCCCCCCCCHHH THIRQSESKEACYIFEGFMDYLSFLTLRLERCPDRPELDGQDYIVLNSTSDLSKAIRPLG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHCCC GYESIHCFLDNDKAGIEAVQELQKEYGLRIRDTSHIYEGYNDLNDFLRDKRSGQAQRQQE CCCEEEEEECCCCHHHHHHHHHHHHHCCEECCHHHHHHCHHHHHHHHHHHHCCHHHHHHC KPEAEKRQRQTEQPKKKGKGIRM CCHHHHHHHHHHCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA