Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150004984

Identifier: 150004984

GI number: 150004984

Start: 3147914

End: 3149083

Strand: Reverse

Name: 150004984

Synonym: BVU_2448

Alternate gene names: NA

Gene position: 3149083-3147914 (Counterclockwise)

Preceding gene: 150004985

Following gene: 150004983

Centisome position: 60.99

GC content: 38.8

Gene sequence:

>1170_bases
ATGATAAAACAAGATTTCTATATAGCCAACCTCATAGCAAGGTATCTGTCGGAAGAAATAACCCCGGAAGAAACAATAAA
ACTAACTGCTTGGAGAGAAGAATCTACAGCGCACGAGATTTTATTCAAGAAAATTTGTAATGAAGAAAACCAAAAGCAAC
ATTTCCGGAAAAATACGGCATTCAATCCTTCATCCGGATGGAAAGAAGTGGAAAAGCGAATCAAAAGAAATAATAACAGA
AGCAGATATATCAAAATAGTAAGTTATGCCGCAATCATTCTGTTACCTGTCCTTTTTGTAAGTATTTCCATGAAATTCAC
CTCGCCCGTTTCTCTTTCGGACAAACAGTTCATCGCACAATCCATTCTACCTGGGGAATCCAAAGCTATTCTGACATTGG
AGGACGGCCAGACAATCCATATAAATAAAGAAACAGAGAGTCTGCTTGAGAAAATAGACGGAGCCCGAGTCCACATGGAC
TCTACAATGCTGAATTACCAAGTAACATCAAAAACAGCTAAAAAAAACAAGCCTGTATATAATAAAGTGGAAACTCCACG
AGGTGGAGAATATGCTCTATTGTTAAGTGATGGAACAAAAGTGCATCTGAACGCAATGACCAGTCTCCGCTTTCCTGTGA
CATTTGATAACGGTCCACGCAAAGTAGAACTGGAAGGCGAGGCCTATTTTGAAGTCTGCAAAACAGGGCAACCATTTATA
GTATGCACTCAAGGCATGCAAGTAGAAGTGTTGGGAACCACATTCAACATCTCTGCTTATCCACAGGAAGAGTATCAGAC
AACTTTGGTAAACGGTTCTGTCAAAGTAAATACAGAAACTGGAGAAAGCTGTATTTTAAAGCCTTCCCAGCAAGCTACCA
TCAGCCTCGGAAACAGCAGCATACAGATACGCATGGTAGATGCCGGATTTTATACTTCATGGATAAAAGGAAAAATTCAT
TTCAAAGACCAGCGATTGGAAGATATCATGAAAATACTATCACGCTGGTATGACATGGAAGTAATTTTTGCCAATGAGAA
AATAAAAGACCTACGCTTTGGATGCAATGTAGATCGGTATTCGGAAATCACTCCATTTGTACGTTTGTTGGAAGAGACTC
AAAAAGTACACGTAAAAGTCAATAACAAAACAATCACATTCTATAACTAA

Upstream 100 bases:

>100_bases
GACATTAATTTGTTTTTTTTCAAAAAAAGTCGTTTTATTATTCACCCGAATTTCAAACAGACCTGTTTTATTATAAAAGA
GATAAAAAACAGGTCAAAAT

Downstream 100 bases:

>100_bases
TAAAAATGATGTATTATGGACAAAAAACACAACTACACCAATCACGGTAAAAGTAGTAAACGTTTGTGGATTACGTTCCT
ATTTTTCTGTATCATTACCA

Product: putative anti-sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MIKQDFYIANLIARYLSEEITPEETIKLTAWREESTAHEILFKKICNEENQKQHFRKNTAFNPSSGWKEVEKRIKRNNNR
SRYIKIVSYAAIILLPVLFVSISMKFTSPVSLSDKQFIAQSILPGESKAILTLEDGQTIHINKETESLLEKIDGARVHMD
STMLNYQVTSKTAKKNKPVYNKVETPRGGEYALLLSDGTKVHLNAMTSLRFPVTFDNGPRKVELEGEAYFEVCKTGQPFI
VCTQGMQVEVLGTTFNISAYPQEEYQTTLVNGSVKVNTETGESCILKPSQQATISLGNSSIQIRMVDAGFYTSWIKGKIH
FKDQRLEDIMKILSRWYDMEVIFANEKIKDLRFGCNVDRYSEITPFVRLLEETQKVHVKVNNKTITFYN

Sequences:

>Translated_389_residues
MIKQDFYIANLIARYLSEEITPEETIKLTAWREESTAHEILFKKICNEENQKQHFRKNTAFNPSSGWKEVEKRIKRNNNR
SRYIKIVSYAAIILLPVLFVSISMKFTSPVSLSDKQFIAQSILPGESKAILTLEDGQTIHINKETESLLEKIDGARVHMD
STMLNYQVTSKTAKKNKPVYNKVETPRGGEYALLLSDGTKVHLNAMTSLRFPVTFDNGPRKVELEGEAYFEVCKTGQPFI
VCTQGMQVEVLGTTFNISAYPQEEYQTTLVNGSVKVNTETGESCILKPSQQATISLGNSSIQIRMVDAGFYTSWIKGKIH
FKDQRLEDIMKILSRWYDMEVIFANEKIKDLRFGCNVDRYSEITPFVRLLEETQKVHVKVNNKTITFYN
>Mature_389_residues
MIKQDFYIANLIARYLSEEITPEETIKLTAWREESTAHEILFKKICNEENQKQHFRKNTAFNPSSGWKEVEKRIKRNNNR
SRYIKIVSYAAIILLPVLFVSISMKFTSPVSLSDKQFIAQSILPGESKAILTLEDGQTIHINKETESLLEKIDGARVHMD
STMLNYQVTSKTAKKNKPVYNKVETPRGGEYALLLSDGTKVHLNAMTSLRFPVTFDNGPRKVELEGEAYFEVCKTGQPFI
VCTQGMQVEVLGTTFNISAYPQEEYQTTLVNGSVKVNTETGESCILKPSQQATISLGNSSIQIRMVDAGFYTSWIKGKIH
FKDQRLEDIMKILSRWYDMEVIFANEKIKDLRFGCNVDRYSEITPFVRLLEETQKVHVKVNNKTITFYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44560; Mature: 44560

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQDFYIANLIARYLSEEITPEETIKLTAWREESTAHEILFKKICNEENQKQHFRKNTA
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCC
FNPSSGWKEVEKRIKRNNNRSRYIKIVSYAAIILLPVLFVSISMKFTSPVSLSDKQFIAQ
CCCCCCHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH
SILPGESKAILTLEDGQTIHINKETESLLEKIDGARVHMDSTMLNYQVTSKTAKKNKPVY
HCCCCCCEEEEEEECCCEEEEECHHHHHHHHCCCCEEEECCEEEEEEEECCHHHCCCCCC
NKVETPRGGEYALLLSDGTKVHLNAMTSLRFPVTFDNGPRKVELEGEAYFEVCKTGQPFI
CCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEEEECCCCEEEEECCHHHHHHHCCCCCEE
VCTQGMQVEVLGTTFNISAYPQEEYQTTLVNGSVKVNTETGESCILKPSQQATISLGNSS
EEECCCEEEEEEEEEEEECCCCHHCEEEEECCEEEEECCCCCEEEECCCCCEEEEECCCE
IQIRMVDAGFYTSWIKGKIHFKDQRLEDIMKILSRWYDMEVIFANEKIKDLRFGCNVDRY
EEEEEEECCCEEHEEEEEEEECHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCCH
SEITPFVRLLEETQKVHVKVNNKTITFYN
HHHHHHHHHHHCCCEEEEEECCEEEEEEC
>Mature Secondary Structure
MIKQDFYIANLIARYLSEEITPEETIKLTAWREESTAHEILFKKICNEENQKQHFRKNTA
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCC
FNPSSGWKEVEKRIKRNNNRSRYIKIVSYAAIILLPVLFVSISMKFTSPVSLSDKQFIAQ
CCCCCCHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH
SILPGESKAILTLEDGQTIHINKETESLLEKIDGARVHMDSTMLNYQVTSKTAKKNKPVY
HCCCCCCEEEEEEECCCEEEEECHHHHHHHHCCCCEEEECCEEEEEEEECCHHHCCCCCC
NKVETPRGGEYALLLSDGTKVHLNAMTSLRFPVTFDNGPRKVELEGEAYFEVCKTGQPFI
CCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEEEECCCCEEEEECCHHHHHHHCCCCCEE
VCTQGMQVEVLGTTFNISAYPQEEYQTTLVNGSVKVNTETGESCILKPSQQATISLGNSS
EEECCCEEEEEEEEEEEECCCCHHCEEEEECCEEEEECCCCCEEEECCCCCEEEEECCCE
IQIRMVDAGFYTSWIKGKIHFKDQRLEDIMKILSRWYDMEVIFANEKIKDLRFGCNVDRY
EEEEEEECCCEEHEEEEEEEECHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCCH
SEITPFVRLLEETQKVHVKVNNKTITFYN
HHHHHHHHHHHCCCEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA