| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yejH [H]
Identifier: 150004949
GI number: 150004949
Start: 3096739
End: 3098994
Strand: Direct
Name: yejH [H]
Synonym: BVU_2412
Alternate gene names: 150004949
Gene position: 3096739-3098994 (Clockwise)
Preceding gene: 150004948
Following gene: 150004950
Centisome position: 59.98
GC content: 54.7
Gene sequence:
>2256_bases ATGAAAACACGTCTGATGGAAGCGTGGAAAGCTCACCGGAGCGTGATGGTGCAGATGCCTACCGGTACGGGCAAGACACA TTTGCTGGCATCTGTGGTCAGTGAGTTCGTGTCTTCTGCCGGCAGCGGGGTATGGCTTATTGCCCATCGTAGGGAACTGG TGGCGCAAATGGAGGAAACGCTGGCTAAATATGGTATCCGGAGGGAGGATACTCCGGTCAGGGTGATGTCTGTCCAATGG CTGTCCCGGCATTGGAATGAGGCGGGTGATGCTCCGGGACTGATTGTGATAGACGAGGCTCATCATGCCTTGGCCGCTTC TTACACGGAGATGTGGAAGCGTTATCCTGCCGCAAAGAAACTGGGTGTGACTGCCACACCTTGCCGCCTGAACCGTAGGG GGTTCACGGAACTGTTCGAGGTACTGGTTACTTCGTGGAGTATTGCCGAGTTTATTGAAAAAGGCGTGTTGTCTGTGTTC GATTATGTATCCATCCGTCCCGGCAGCGAGGAGCGGCGGCTCATTGACGGTCTGGAGAAACGGGGGGCCGATGGGGATTA TCAGGTGAAAGAGATGGATGCGGTACTGAACAGGCGTCCCGGTATCGAGCGCCTGTACCGCAGTGTCAGGCAGTTTGCTT CCGGCAAGAAGGGGATGGTGTATGCCATCAGCATTGAACATGCCCGGCGGATAGCGGAGTATTACAGCAGGCGGGGAGTG AATGCGGTGGCTGTGGACAGCAAGACTCCTGCTATGGAGCGTAAGCGGATGGTGGAGGAGTTCAGACATGGAAAAATCGA GGTGCTGGTGAATGTGGATGTATTCAGCGAGGGGTTCGACTGTCCCGATGTGGAGTTTGTACAACTGGCCCGTCCTACTT TGTCACTGGCTAAATATTTGCAGCAGGTAGGGCGCGGATTGCGGAGATCGGAGGGCAAGGAGGCGTGTATGCTGATAGAC AATGTGGGGCTGTACCGCATTTTCGGGCTTCCTACACAGCGATGGAACTGGGATGCTATGTTCCGGGGACGGATGGCGGG AAAGGGGAGTTTGCCCGGACGGATGAACTGTGATGCTTCCGTTACCGCTTTTCCGGTGGTGGAAAGGCCGGCTGAAGCCG GTGGGGACTTGGTGGTGGTTATGGAGCACGGGCGTTTGCTTTCTTCCATCAGAGAGCAGGCTTTGCCGGATGAGAAGGAG CAGTCACCGTCATGCAGGCTGAGGGCATTTGTAGATAAGGAAACAGGTCTTTGGGGATTGGAAAAGGGAGATGAGATGTT GCCGGACGCTTCGTTTAAAGAGGTTTTGAGTATCAAAGGACGTTTTGCCGTGGGGAGGCTTCGGAACGGGTGTGTCCGGG TACTGGATGATACGGGGGCTTTGGTGGCCGAACCGGGGCATTGCCGTGAGGTGAGGTTTCTGAAAGATGATTTGTTGCAA GTCCGTCATGCCGGGAATTCGGTGTCTTATGTGGATTTACGGAACGGCCGGTGTTATTCTGTCCGCCCGCGTGTCCTCAG ATACGGGAGCATAGAATTGTTACAGGCGAACCGTACTTATTACAGCAGGACAAGGCAGGTGTATGCCAATACATGCGGGT TGCCTTCTTCGTCCATCGTGTGGATGGGGTTTTATGTGAAGATGTACGATGGCAGAGTGCCTTCCCGATGCCGCCGCATG GAAGATGGAGGCTTTTGTTGTGAACCGCAGGTTTGTCTGTTGGAGGGGGATGAGGAGCGTGCTTATTACCTGAGCGGACG GTTGCCGGATCAAAGTATTGTGGTGATGGATGAGGAGGGACGGTATTACCATGTGGAGAAAGGGCATGGAAAGCGTTATG TGGCCTGTAACCGTCCGTCGGACCGGAGTGAGGATTTTGATGAGGCGGTGGCATTGCTCCGAAGACAGGCGGACGAGCGT GTGGAGAAACGCTTGCGTGAGGAGAAGTGCGAGTATGAACGGAAACGGCAGCGTATAATCAGCAGGAGTGTGGAGGCCGT ACCTTTTCAAATAGGAGTGAAATGGGGGCTGAGGACAGCGGAGCGGATTTTGATTCCACCTGTCTATCGGAGGATATTGC ATCCGGTGGGTGGTTATTGCGCCTATCAGGACAGTTCCTGCCAGTGGGGGGTACTGGCTGTAGATGGAAGGATCATTATC CGGGCCCGGTATATGGAAGTGGAGATAGACAGGGATGGAACGGCGCGTCTTACTTTGGTTCCGGGGAAGATGGAAACGGT GAAGCTGACGGACTGA
Upstream 100 bases:
>100_bases AATATGCTGGCTAGTAAATAATTTTTTCAGTTATCCTCTTACTCCATTGGCACGTTAGCAAATCGGCAAATTATTTATGT TGCGGGATTATCAGATAGAG
Downstream 100 bases:
>100_bases TAGGATAAAAAGCAGGGGATAACTTTTTGTCAAACCGATATTTGGCGATGGAATACGTATCATTATGAAAAGTTTTGTAA CTTTGCATCCGATTTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 751; Mature: 751
Protein sequence:
>751_residues MKTRLMEAWKAHRSVMVQMPTGTGKTHLLASVVSEFVSSAGSGVWLIAHRRELVAQMEETLAKYGIRREDTPVRVMSVQW LSRHWNEAGDAPGLIVIDEAHHALAASYTEMWKRYPAAKKLGVTATPCRLNRRGFTELFEVLVTSWSIAEFIEKGVLSVF DYVSIRPGSEERRLIDGLEKRGADGDYQVKEMDAVLNRRPGIERLYRSVRQFASGKKGMVYAISIEHARRIAEYYSRRGV NAVAVDSKTPAMERKRMVEEFRHGKIEVLVNVDVFSEGFDCPDVEFVQLARPTLSLAKYLQQVGRGLRRSEGKEACMLID NVGLYRIFGLPTQRWNWDAMFRGRMAGKGSLPGRMNCDASVTAFPVVERPAEAGGDLVVVMEHGRLLSSIREQALPDEKE QSPSCRLRAFVDKETGLWGLEKGDEMLPDASFKEVLSIKGRFAVGRLRNGCVRVLDDTGALVAEPGHCREVRFLKDDLLQ VRHAGNSVSYVDLRNGRCYSVRPRVLRYGSIELLQANRTYYSRTRQVYANTCGLPSSSIVWMGFYVKMYDGRVPSRCRRM EDGGFCCEPQVCLLEGDEERAYYLSGRLPDQSIVVMDEEGRYYHVEKGHGKRYVACNRPSDRSEDFDEAVALLRRQADER VEKRLREEKCEYERKRQRIISRSVEAVPFQIGVKWGLRTAERILIPPVYRRILHPVGGYCAYQDSSCQWGVLAVDGRIII RARYMEVEIDRDGTARLTLVPGKMETVKLTD
Sequences:
>Translated_751_residues MKTRLMEAWKAHRSVMVQMPTGTGKTHLLASVVSEFVSSAGSGVWLIAHRRELVAQMEETLAKYGIRREDTPVRVMSVQW LSRHWNEAGDAPGLIVIDEAHHALAASYTEMWKRYPAAKKLGVTATPCRLNRRGFTELFEVLVTSWSIAEFIEKGVLSVF DYVSIRPGSEERRLIDGLEKRGADGDYQVKEMDAVLNRRPGIERLYRSVRQFASGKKGMVYAISIEHARRIAEYYSRRGV NAVAVDSKTPAMERKRMVEEFRHGKIEVLVNVDVFSEGFDCPDVEFVQLARPTLSLAKYLQQVGRGLRRSEGKEACMLID NVGLYRIFGLPTQRWNWDAMFRGRMAGKGSLPGRMNCDASVTAFPVVERPAEAGGDLVVVMEHGRLLSSIREQALPDEKE QSPSCRLRAFVDKETGLWGLEKGDEMLPDASFKEVLSIKGRFAVGRLRNGCVRVLDDTGALVAEPGHCREVRFLKDDLLQ VRHAGNSVSYVDLRNGRCYSVRPRVLRYGSIELLQANRTYYSRTRQVYANTCGLPSSSIVWMGFYVKMYDGRVPSRCRRM EDGGFCCEPQVCLLEGDEERAYYLSGRLPDQSIVVMDEEGRYYHVEKGHGKRYVACNRPSDRSEDFDEAVALLRRQADER VEKRLREEKCEYERKRQRIISRSVEAVPFQIGVKWGLRTAERILIPPVYRRILHPVGGYCAYQDSSCQWGVLAVDGRIII RARYMEVEIDRDGTARLTLVPGKMETVKLTD >Mature_751_residues MKTRLMEAWKAHRSVMVQMPTGTGKTHLLASVVSEFVSSAGSGVWLIAHRRELVAQMEETLAKYGIRREDTPVRVMSVQW LSRHWNEAGDAPGLIVIDEAHHALAASYTEMWKRYPAAKKLGVTATPCRLNRRGFTELFEVLVTSWSIAEFIEKGVLSVF DYVSIRPGSEERRLIDGLEKRGADGDYQVKEMDAVLNRRPGIERLYRSVRQFASGKKGMVYAISIEHARRIAEYYSRRGV NAVAVDSKTPAMERKRMVEEFRHGKIEVLVNVDVFSEGFDCPDVEFVQLARPTLSLAKYLQQVGRGLRRSEGKEACMLID NVGLYRIFGLPTQRWNWDAMFRGRMAGKGSLPGRMNCDASVTAFPVVERPAEAGGDLVVVMEHGRLLSSIREQALPDEKE QSPSCRLRAFVDKETGLWGLEKGDEMLPDASFKEVLSIKGRFAVGRLRNGCVRVLDDTGALVAEPGHCREVRFLKDDLLQ VRHAGNSVSYVDLRNGRCYSVRPRVLRYGSIELLQANRTYYSRTRQVYANTCGLPSSSIVWMGFYVKMYDGRVPSRCRRM EDGGFCCEPQVCLLEGDEERAYYLSGRLPDQSIVVMDEEGRYYHVEKGHGKRYVACNRPSDRSEDFDEAVALLRRQADER VEKRLREEKCEYERKRQRIISRSVEAVPFQIGVKWGLRTAERILIPPVYRRILHPVGGYCAYQDSSCQWGVLAVDGRIII RARYMEVEIDRDGTARLTLVPGKMETVKLTD
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788511, Length=352, Percent_Identity=26.7045454545455, Blast_Score=119, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6320539, Length=336, Percent_Identity=29.1666666666667, Blast_Score=144, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR006935 [H]
Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 85429; Mature: 85429
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRLMEAWKAHRSVMVQMPTGTGKTHLLASVVSEFVSSAGSGVWLIAHRRELVAQMEET CCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH LAKYGIRREDTPVRVMSVQWLSRHWNEAGDAPGLIVIDEAHHALAASYTEMWKRYPAAKK HHHCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHH LGVTATPCRLNRRGFTELFEVLVTSWSIAEFIEKGVLSVFDYVSIRPGSEERRLIDGLEK CCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RGADGDYQVKEMDAVLNRRPGIERLYRSVRQFASGKKGMVYAISIEHARRIAEYYSRRGV CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCC NAVAVDSKTPAMERKRMVEEFRHGKIEVLVNVDVFSEGFDCPDVEFVQLARPTLSLAKYL CEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH QQVGRGLRRSEGKEACMLIDNVGLYRIFGLPTQRWNWDAMFRGRMAGKGSLPGRMNCDAS HHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC VTAFPVVERPAEAGGDLVVVMEHGRLLSSIREQALPDEKEQSPSCRLRAFVDKETGLWGL CEEEECCCCHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCC EKGDEMLPDASFKEVLSIKGRFAVGRLRNGCVRVLDDTGALVAEPGHCREVRFLKDDLLQ CCCCCCCCCCHHHHHHHHCCCEEHHHHCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHH VRHAGNSVSYVDLRNGRCYSVRPRVLRYGSIELLQANRTYYSRTRQVYANTCGLPSSSIV HHHCCCCEEEEECCCCCEEEECHHHEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEE WMGFYVKMYDGRVPSRCRRMEDGGFCCEPQVCLLEGDEERAYYLSGRLPDQSIVVMDEEG EEEEEEEEECCCCCHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCC RYYHVEKGHGKRYVACNRPSDRSEDFDEAVALLRRQADERVEKRLREEKCEYERKRQRII CEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRSVEAVPFQIGVKWGLRTAERILIPPVYRRILHPVGGYCAYQDSSCQWGVLAVDGRIII HHHHHHCEEEEECCCCCCCHHHEECCHHHHHHHHCCCCEEEECCCCCCEEEEEECCEEEE RARYMEVEIDRDGTARLTLVPGKMETVKLTD EEEEEEEEECCCCCEEEEEECCCCCEEEECC >Mature Secondary Structure MKTRLMEAWKAHRSVMVQMPTGTGKTHLLASVVSEFVSSAGSGVWLIAHRRELVAQMEET CCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH LAKYGIRREDTPVRVMSVQWLSRHWNEAGDAPGLIVIDEAHHALAASYTEMWKRYPAAKK HHHCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHH LGVTATPCRLNRRGFTELFEVLVTSWSIAEFIEKGVLSVFDYVSIRPGSEERRLIDGLEK CCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RGADGDYQVKEMDAVLNRRPGIERLYRSVRQFASGKKGMVYAISIEHARRIAEYYSRRGV CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCC NAVAVDSKTPAMERKRMVEEFRHGKIEVLVNVDVFSEGFDCPDVEFVQLARPTLSLAKYL CEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH QQVGRGLRRSEGKEACMLIDNVGLYRIFGLPTQRWNWDAMFRGRMAGKGSLPGRMNCDAS HHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC VTAFPVVERPAEAGGDLVVVMEHGRLLSSIREQALPDEKEQSPSCRLRAFVDKETGLWGL CEEEECCCCHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCC EKGDEMLPDASFKEVLSIKGRFAVGRLRNGCVRVLDDTGALVAEPGHCREVRFLKDDLLQ CCCCCCCCCCHHHHHHHHCCCEEHHHHCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHH VRHAGNSVSYVDLRNGRCYSVRPRVLRYGSIELLQANRTYYSRTRQVYANTCGLPSSSIV HHHCCCCEEEEECCCCCEEEECHHHEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEE WMGFYVKMYDGRVPSRCRRMEDGGFCCEPQVCLLEGDEERAYYLSGRLPDQSIVVMDEEG EEEEEEEEECCCCCHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCC RYYHVEKGHGKRYVACNRPSDRSEDFDEAVALLRRQADERVEKRLREEKCEYERKRQRII CEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRSVEAVPFQIGVKWGLRTAERILIPPVYRRILHPVGGYCAYQDSSCQWGVLAVDGRIII HHHHHHCEEEEECCCCCCCHHHEECCHHHHHHHHCCCCEEEECCCCCCEEEEEECCEEEE RARYMEVEIDRDGTARLTLVPGKMETVKLTD EEEEEEEEECCCCCEEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]