| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004934
Identifier: 150004934
GI number: 150004934
Start: 3079994
End: 3081184
Strand: Direct
Name: 150004934
Synonym: BVU_2397
Alternate gene names: NA
Gene position: 3079994-3081184 (Clockwise)
Preceding gene: 150004933
Following gene: 150004935
Centisome position: 59.65
GC content: 42.74
Gene sequence:
>1191_bases ATGCTCCAGTACATTGACAATAGAATAAACTACAACTATTCCCTATGTCAGCAATGTGGCATTTGTGAGGCAGTATGTCC TAAACAGGCAATATCATTCAAGTTGTTGAAAAACGGCATACACAAGGTTGTCATTGATGACGAGAAGTGCATCAGGTGTC TGCGATGCGTAAAAAGTTGCCCTGCTAATAAGAAAGAAGGTTATGATGGATATTTCAATAACTTTTCGATTAAAAAGTAT TTTTTAGGGTATAATAAGGACAACAAGATAAGGCGTGAAAGCTCGTCGGGCGGGGTGTGCAAGACATTGATTATTGAGAG CCTGAAAAACAACTTGGCTGACGGCGTGTACACGTTGAGGAAGACCGGACGTTATCCGTATGCCGAAGGCGAGTTTTACA CGAAAGAGAATATACCTCGATATGATGACATTCCGAACTCGGTTTACCACTCTGTACTTGCGTGTCGTGAGGTAAAGAAA ATACAGCGGTGCGAGCGTCTGATTGTTATCGGTACCAGCTGCCAGCTTAGGGCCATGAATACCATACTGAAAGGGAAGGC GAATGAGATTATCAGAATTTGTATTTTTTGCAAGCAGCAGAAGACTTTGGATTCGACCAGATTTCTCGCTAAAATTATGG GTATGGAAATCTCTGAAAATCTAAATTTCTCGATCCGTTATCGTGGGAACGGATGGCCGGGAATTGTTCGAGTGAACGAA TCTGAACTGTCTTGGAATAGGGCAGCTCAGATTCCGTTCGGTAGAAGATTGTGGACTATTCCTGGCTGCAATGTTTGTGG TGACTCGTTCGGGACAAATGTCGGAGCGGACATAACCTTAATGGACCCTTGGAAAATAAGATCTGAAAACGATTTGGGTG AAACCTTAGTCATCGTACACACAGACAAAGGACTTAATCTGTTGAATAATATCTTATCGTTAAGGTCAGAACAGAAAGCA TATAAAGAAGTAGCACTTGCGCTCGACTTGAAAGACATTTGGCGCAAACAGCAGCTTGTGCCGTTCTTCCGTGGCGAAAA TTGTACGGAGACTGTCCTCAAGGCAGGTAAGGCTGAGCAAAGCCAGAGAAAGTTCTTGCGCTCTGTGGTTGAGACACTGC CAAGAATGCCGATTCTCTTCTACCGCATTTTATGCAAAATTTCTGACAGGCGAAATAACATATTAAAATAA
Upstream 100 bases:
>100_bases ATGATTGAAAGTGCTTATAAAAGAGTTACGGAACTTTATAATGTGCGGATTACGGCTAAAACATATTTAGAAAAATACAA AGAATTTATAGAATCAGATT
Downstream 100 bases:
>100_bases CGTTTATGGATATAAAAGTAATCACCCGACATGCTCCGTCTAATTACGGTTCTTTATTGCAGTCAATAGCCACAATAACG ACATTGGAACGATTAGGGCA
Product: iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MLQYIDNRINYNYSLCQQCGICEAVCPKQAISFKLLKNGIHKVVIDDEKCIRCLRCVKSCPANKKEGYDGYFNNFSIKKY FLGYNKDNKIRRESSSGGVCKTLIIESLKNNLADGVYTLRKTGRYPYAEGEFYTKENIPRYDDIPNSVYHSVLACREVKK IQRCERLIVIGTSCQLRAMNTILKGKANEIIRICIFCKQQKTLDSTRFLAKIMGMEISENLNFSIRYRGNGWPGIVRVNE SELSWNRAAQIPFGRRLWTIPGCNVCGDSFGTNVGADITLMDPWKIRSENDLGETLVIVHTDKGLNLLNNILSLRSEQKA YKEVALALDLKDIWRKQQLVPFFRGENCTETVLKAGKAEQSQRKFLRSVVETLPRMPILFYRILCKISDRRNNILK
Sequences:
>Translated_396_residues MLQYIDNRINYNYSLCQQCGICEAVCPKQAISFKLLKNGIHKVVIDDEKCIRCLRCVKSCPANKKEGYDGYFNNFSIKKY FLGYNKDNKIRRESSSGGVCKTLIIESLKNNLADGVYTLRKTGRYPYAEGEFYTKENIPRYDDIPNSVYHSVLACREVKK IQRCERLIVIGTSCQLRAMNTILKGKANEIIRICIFCKQQKTLDSTRFLAKIMGMEISENLNFSIRYRGNGWPGIVRVNE SELSWNRAAQIPFGRRLWTIPGCNVCGDSFGTNVGADITLMDPWKIRSENDLGETLVIVHTDKGLNLLNNILSLRSEQKA YKEVALALDLKDIWRKQQLVPFFRGENCTETVLKAGKAEQSQRKFLRSVVETLPRMPILFYRILCKISDRRNNILK >Mature_396_residues MLQYIDNRINYNYSLCQQCGICEAVCPKQAISFKLLKNGIHKVVIDDEKCIRCLRCVKSCPANKKEGYDGYFNNFSIKKY FLGYNKDNKIRRESSSGGVCKTLIIESLKNNLADGVYTLRKTGRYPYAEGEFYTKENIPRYDDIPNSVYHSVLACREVKK IQRCERLIVIGTSCQLRAMNTILKGKANEIIRICIFCKQQKTLDSTRFLAKIMGMEISENLNFSIRYRGNGWPGIVRVNE SELSWNRAAQIPFGRRLWTIPGCNVCGDSFGTNVGADITLMDPWKIRSENDLGETLVIVHTDKGLNLLNNILSLRSEQKA YKEVALALDLKDIWRKQQLVPFFRGENCTETVLKAGKAEQSQRKFLRSVVETLPRMPILFYRILCKISDRRNNILK
Specific function: Unknown
COG id: COG1035
COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45512; Mature: 45512
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQYIDNRINYNYSLCQQCGICEAVCPKQAISFKLLKNGIHKVVIDDEKCIRCLRCVKSC CCCCCCHHCCCCHHHHHHCCCHHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHC PANKKEGYDGYFNNFSIKKYFLGYNKDNKIRRESSSGGVCKTLIIESLKNNLADGVYTLR CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KTGRYPYAEGEFYTKENIPRYDDIPNSVYHSVLACREVKKIQRCERLIVIGTSCQLRAMN HCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH TILKGKANEIIRICIFCKQQKTLDSTRFLAKIMGMEISENLNFSIRYRGNGWPGIVRVNE HHHCCCHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECC SELSWNRAAQIPFGRRLWTIPGCNVCGDSFGTNVGADITLMDPWKIRSENDLGETLVIVH CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCEEEEEE TDKGLNLLNNILSLRSEQKAYKEVALALDLKDIWRKQQLVPFFRGENCTETVLKAGKAEQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCHHHHHHHCCCCHH SQRKFLRSVVETLPRMPILFYRILCKISDRRNNILK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLQYIDNRINYNYSLCQQCGICEAVCPKQAISFKLLKNGIHKVVIDDEKCIRCLRCVKSC CCCCCCHHCCCCHHHHHHCCCHHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHC PANKKEGYDGYFNNFSIKKYFLGYNKDNKIRRESSSGGVCKTLIIESLKNNLADGVYTLR CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KTGRYPYAEGEFYTKENIPRYDDIPNSVYHSVLACREVKKIQRCERLIVIGTSCQLRAMN HCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH TILKGKANEIIRICIFCKQQKTLDSTRFLAKIMGMEISENLNFSIRYRGNGWPGIVRVNE HHHCCCHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECC SELSWNRAAQIPFGRRLWTIPGCNVCGDSFGTNVGADITLMDPWKIRSENDLGETLVIVH CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCEEEEEE TDKGLNLLNNILSLRSEQKAYKEVALALDLKDIWRKQQLVPFFRGENCTETVLKAGKAEQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCHHHHHHHCCCCHH SQRKFLRSVVETLPRMPILFYRILCKISDRRNNILK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA