Click here to switch to the map view.

The map label for this gene is yccZ [C]

Identifier: 150004926

GI number: 150004926

Start: 3068915

End: 3069715

Strand: Direct

Name: yccZ [C]

Synonym: BVU_2389

Alternate gene names: 150004926

Gene position: 3068915-3069715 (Clockwise)

Preceding gene: 150004925

Following gene: 150004927

Centisome position: 59.44

GC content: 44.07

Gene sequence:

>801_bases
ATGAAGACTTTAAAGAAACTATTATTGTTTGTTGTGGCATCCGCCTTGTTGGCAGGCTGCACCTCCTATAAAAATGTACC
TTACATGCAGAATCCCGAGGTAGTGAACAGTTACAGGGAAGATCTTCCCCTTTATGATGCAAAGATTATGCCGAAAGATT
TGCTGAGTATAACTGTGAACACGAGTGATCCTCAGGCTGCCGCTCCTTTTAACCTGACGGTACAGACTCCTCTGAATGCA
GCCCTGACCAATATTAATACTACCACACAACCCACTCTCCAGCAATACCTGGTAAATAACAAGGGTGAGATAGATTTCCC
CGTTATCGGTCGTCTGAAGGTAGGCGGCCTTACGAAAAACGAGGCGGAAGATTTGATCCGTGAGCAATTGCAGCCCTATC
TGAAAGAGAGTCCTATCGTTACAGTCCGTATGGCAAATTACAAAATTTCGGTATTGGGAGAGGTGAACCGTCCGGGTACT
TTTACAGTAGGAAATGAAAAGGTAAATATCCTTGAAGCCCTTGCCATGGCGGGAGATATGACTGTTTATGGCGTCCGTGA
CAATGTGAAACTGATTCGTGAAGATGCAAAAGGCAAGCGTGAGATTATCAATTTGAATCTTAATAATGCAGAACTGGTTG
TATCTCCCTATTACTACCTGCGCCAGAACGATATCATCTATGTAACGCCCAATAAGACAAAAGCCAAGAACTCGGACATT
GGCAGCAGCACCAGCATATGGATCAGTGCTACATCCATTTTGGTATCTCTTGCAAGCCTTCTGGCAACCATCTTGAAATA
A

Upstream 100 bases:

>100_bases
ATACGTAATGCCGGTGAATCTCCTGTTTCGGAGAATCACGGCAGAGGTCTTTTTTCGCGCCTGTTTGGCAGATGATTGAA
TAATAAATGAAAAAACTGAT

Downstream 100 bases:

>100_bases
AACTCATAAATATAATTGTTGATTACAAACTGTTGATATGACTGACGAACAGAAGAACACCCCTTCGGGTACCGAGCAAC
GTGAGGAGAACGTTGATCTT

Product: polysaccharide export outer membrane protein

Products: NA

Alternate protein names: Polysaccharide Export Outer Membrane Protein; Polysaccharide Export Protein BexD/CtrA/VexA Family; Polysaccharide Export System Outer Membrane Protein; Polysaccharide Biosynthesis/Export Protein; Periplasmic Protein Involved In Polysaccharide Export; BexD/CtrA/VexA Family Polysaccharide Export Protein; Polysaccharide Exporter; EPS Related Membrane Protein; Lipoprotein

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKTLKKLLLFVVASALLAGCTSYKNVPYMQNPEVVNSYREDLPLYDAKIMPKDLLSITVNTSDPQAAAPFNLTVQTPLNA
ALTNINTTTQPTLQQYLVNNKGEIDFPVIGRLKVGGLTKNEAEDLIREQLQPYLKESPIVTVRMANYKISVLGEVNRPGT
FTVGNEKVNILEALAMAGDMTVYGVRDNVKLIREDAKGKREIINLNLNNAELVVSPYYYLRQNDIIYVTPNKTKAKNSDI
GSSTSIWISATSILVSLASLLATILK

Sequences:

>Translated_266_residues
MKTLKKLLLFVVASALLAGCTSYKNVPYMQNPEVVNSYREDLPLYDAKIMPKDLLSITVNTSDPQAAAPFNLTVQTPLNA
ALTNINTTTQPTLQQYLVNNKGEIDFPVIGRLKVGGLTKNEAEDLIREQLQPYLKESPIVTVRMANYKISVLGEVNRPGT
FTVGNEKVNILEALAMAGDMTVYGVRDNVKLIREDAKGKREIINLNLNNAELVVSPYYYLRQNDIIYVTPNKTKAKNSDI
GSSTSIWISATSILVSLASLLATILK
>Mature_266_residues
MKTLKKLLLFVVASALLAGCTSYKNVPYMQNPEVVNSYREDLPLYDAKIMPKDLLSITVNTSDPQAAAPFNLTVQTPLNA
ALTNINTTTQPTLQQYLVNNKGEIDFPVIGRLKVGGLTKNEAEDLIREQLQPYLKESPIVTVRMANYKISVLGEVNRPGT
FTVGNEKVNILEALAMAGDMTVYGVRDNVKLIREDAKGKREIINLNLNNAELVVSPYYYLRQNDIIYVTPNKTKAKNSDI
GSSTSIWISATSILVSLASLLATILK

Specific function: May Be Involved In Polysaccharide Transport. [C]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29351; Mature: 29351

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLKKLLLFVVASALLAGCTSYKNVPYMQNPEVVNSYREDLPLYDAKIMPKDLLSITVN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEE
TSDPQAAAPFNLTVQTPLNAALTNINTTTQPTLQQYLVNNKGEIDFPVIGRLKVGGLTKN
CCCCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEECEEEECCCCCH
EAEDLIREQLQPYLKESPIVTVRMANYKISVLGEVNRPGTFTVGNEKVNILEALAMAGDM
HHHHHHHHHHHHHHHCCCEEEEEEECEEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCE
TVYGVRDNVKLIREDAKGKREIINLNLNNAELVVSPYYYLRQNDIIYVTPNKTKAKNSDI
EEEEECCCHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEECCCEEEECCCCCCCCCCCC
GSSTSIWISATSILVSLASLLATILK
CCCCEEEEEHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKTLKKLLLFVVASALLAGCTSYKNVPYMQNPEVVNSYREDLPLYDAKIMPKDLLSITVN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEE
TSDPQAAAPFNLTVQTPLNAALTNINTTTQPTLQQYLVNNKGEIDFPVIGRLKVGGLTKN
CCCCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEECEEEECCCCCH
EAEDLIREQLQPYLKESPIVTVRMANYKISVLGEVNRPGTFTVGNEKVNILEALAMAGDM
HHHHHHHHHHHHHHHCCCEEEEEEECEEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCE
TVYGVRDNVKLIREDAKGKREIINLNLNNAELVVSPYYYLRQNDIIYVTPNKTKAKNSDI
EEEEECCCHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEECCCEEEECCCCCCCCCCCC
GSSTSIWISATSILVSLASLLATILK
CCCCEEEEEHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA