| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150004923
Identifier: 150004923
GI number: 150004923
Start: 3066555
End: 3067490
Strand: Direct
Name: 150004923
Synonym: BVU_2386
Alternate gene names: NA
Gene position: 3066555-3067490 (Clockwise)
Preceding gene: 150004920
Following gene: 150004924
Centisome position: 59.39
GC content: 40.71
Gene sequence:
>936_bases ATGGCAAATATGAGATTAGTAAAATTAAAGAACCGTCCGAGTAAGGGCGTTTTCGTTTTTGAATACATGCAGGAGCAGAT AGAGCGTCTTAGAGGGCAAGGAAAAGAACGGACAGTCGAAACATATCAGTCCGCATTGAACAGCTTCATGAAGTTCCGTG ACGGCATAGACTTATGTTTTGATGAGATGGATGCAGATTTGATGGAACATTATGAAACGGAGATGCGCTCCACTCACCAT TTAAGTCGTAATACCACCTCTTTTTATATGCGTATTTTGCGTTGTGTGTATCGTAAGGCAGTGGGTGAGGGACTGGCCCT TCCTGCAGATCCTTTTGAGAATGTATATACTGGTGTGGACAAGACCTCAAAGAGAGCTGCCACCCTGACAGATATCAAAC ACATCAAGCAGTTGGATCTTTCCGATCATAAATCATTGGAATTTGCACGAGATATCTTTCTCTTTTCTTTCTATATGCGA GGAATGTCTTTTATAGATCTTGCCTATTTGCGTAAAAAAGATCTCAATAGTGGCTTTGTGAGTTATAGCCGTCGTAAAAC AGGTAAGAAACTCATTATACGGTGGGAAAAACAGATGCAGGAGATTATTGACAGATACGGAGATTCGGAAACACAATATC TTTTACCTATTATAGAACGAGAAGATGGCACGGAGCACAGACAATACCGGAATAAAATGTTGCTGGTGAACCGTAAGCTG AAGAAGATTGCAGCCCGGGCAGGATTGACCACACCACTTACTATGTATGTGGCGCGCCATTCCTGGGCAAGTATAGCTAA GACGAAAAACATCTCGATTGGTATTATCAGCGAAGCGATGGGGCATGATTCAGAAACTACTACACAAATCTATCTTTCGT CTATACAGACTAATCAGATAGATAATGCAAATAGAAATATTTTAAAAGATCTATAA
Upstream 100 bases:
>100_bases CTAAAGAATCTATTTGCCATTACAAGTATTTAAGTCCTCATTAAAATATAAATCATGATATTATATTTTTCTTTGATGAT TTATTTAATTAACCTAGGTA
Downstream 100 bases:
>100_bases GAAGGGGAATATTTGAATTATTTTGAAATTAGGACGCACTCTTATATAGAGAGCGTCTATCGGCTGCAAAGGTATAGATT TATTTTCATTTTCTAGCATT
Product: transposase
Products: NA
Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Integrase Family Protein; Tyrosine Site-Specific Recombinase; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase IntIA; Bacteriophage Integrase; Site-Specific Recombinase; Integrase/Site-Specific Recombinase; Recombinase/Integrase; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MANMRLVKLKNRPSKGVFVFEYMQEQIERLRGQGKERTVETYQSALNSFMKFRDGIDLCFDEMDADLMEHYETEMRSTHH LSRNTTSFYMRILRCVYRKAVGEGLALPADPFENVYTGVDKTSKRAATLTDIKHIKQLDLSDHKSLEFARDIFLFSFYMR GMSFIDLAYLRKKDLNSGFVSYSRRKTGKKLIIRWEKQMQEIIDRYGDSETQYLLPIIEREDGTEHRQYRNKMLLVNRKL KKIAARAGLTTPLTMYVARHSWASIAKTKNISIGIISEAMGHDSETTTQIYLSSIQTNQIDNANRNILKDL
Sequences:
>Translated_311_residues MANMRLVKLKNRPSKGVFVFEYMQEQIERLRGQGKERTVETYQSALNSFMKFRDGIDLCFDEMDADLMEHYETEMRSTHH LSRNTTSFYMRILRCVYRKAVGEGLALPADPFENVYTGVDKTSKRAATLTDIKHIKQLDLSDHKSLEFARDIFLFSFYMR GMSFIDLAYLRKKDLNSGFVSYSRRKTGKKLIIRWEKQMQEIIDRYGDSETQYLLPIIEREDGTEHRQYRNKMLLVNRKL KKIAARAGLTTPLTMYVARHSWASIAKTKNISIGIISEAMGHDSETTTQIYLSSIQTNQIDNANRNILKDL >Mature_310_residues ANMRLVKLKNRPSKGVFVFEYMQEQIERLRGQGKERTVETYQSALNSFMKFRDGIDLCFDEMDADLMEHYETEMRSTHHL SRNTTSFYMRILRCVYRKAVGEGLALPADPFENVYTGVDKTSKRAATLTDIKHIKQLDLSDHKSLEFARDIFLFSFYMRG MSFIDLAYLRKKDLNSGFVSYSRRKTGKKLIIRWEKQMQEIIDRYGDSETQYLLPIIEREDGTEHRQYRNKMLLVNRKLK KIAARAGLTTPLTMYVARHSWASIAKTKNISIGIISEAMGHDSETTTQIYLSSIQTNQIDNANRNILKDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36290; Mature: 36159
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANMRLVKLKNRPSKGVFVFEYMQEQIERLRGQGKERTVETYQSALNSFMKFRDGIDLCF CCCCEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH DEMDADLMEHYETEMRSTHHLSRNTTSFYMRILRCVYRKAVGEGLALPADPFENVYTGVD HHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC KTSKRAATLTDIKHIKQLDLSDHKSLEFARDIFLFSFYMRGMSFIDLAYLRKKDLNSGFV CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHH SYSRRKTGKKLIIRWEKQMQEIIDRYGDSETQYLLPIIEREDGTEHRQYRNKMLLVNRKL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH KKIAARAGLTTPLTMYVARHSWASIAKTKNISIGIISEAMGHDSETTTQIYLSSIQTNQI HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHCCC DNANRNILKDL CCCCHHHHHCC >Mature Secondary Structure ANMRLVKLKNRPSKGVFVFEYMQEQIERLRGQGKERTVETYQSALNSFMKFRDGIDLCF CCCEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH DEMDADLMEHYETEMRSTHHLSRNTTSFYMRILRCVYRKAVGEGLALPADPFENVYTGVD HHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC KTSKRAATLTDIKHIKQLDLSDHKSLEFARDIFLFSFYMRGMSFIDLAYLRKKDLNSGFV CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHH SYSRRKTGKKLIIRWEKQMQEIIDRYGDSETQYLLPIIEREDGTEHRQYRNKMLLVNRKL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH KKIAARAGLTTPLTMYVARHSWASIAKTKNISIGIISEAMGHDSETTTQIYLSSIQTNQI HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHCCC DNANRNILKDL CCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA