| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is trxA [H]
Identifier: 150004905
GI number: 150004905
Start: 3048064
End: 3048522
Strand: Reverse
Name: trxA [H]
Synonym: BVU_2368
Alternate gene names: 150004905
Gene position: 3048522-3048064 (Counterclockwise)
Preceding gene: 150004906
Following gene: 150004902
Centisome position: 59.04
GC content: 39.43
Gene sequence:
>459_bases ATGAAGAAAACAATCACATGTATTCTATTAACTGCCGGATTAACGGGATATCTCAGTGCCCAAACTCCTGTCCAGGATAA GTCAGATAAAAATTCAGGAAAAGTCATACGTATGGACAAACAAATGTTCTTGGATAATATATTTGACTACACTTCCGGTT CCACTAACTGGAAATACAAAGGAGAGAAACCGGCAGTTATTGATTTTTACGCCACATGGTGTGGTCCCTGCCGTATGGTT GCCCCTCTGCTAAAAAGTCTGGCCAAAGAATACAAAGATCAAATTGCAGTTTACAAAGTAGATACAGACAAACAAAAAGA ATTATCTGCCGTTATGGGAATACAGTCACTGCCCACCATCATCTTTATTCCCAAAACGGGACAGCCACAAATCATTATAG GAGCAGCCAATAAAGCTACTTTCAGGAAAGCCATTGAAGAAGTGTTACTGAAAGAATGA
Upstream 100 bases:
>100_bases CACACTAATGATTTTTAAAAACGGTAAGCAATTGTGGCGACAAAGCGGTGTAATGCGTGCCAATGATTTAAGCACTATTC TAGCCCAATATGAGTAAAAT
Downstream 100 bases:
>100_bases GAAACAAGCCCTATATATCTCTAATCTAAATATAACCAATAAAAGAGAGGGGGCAATAATAATTGCTCCCCCTCTCTCCA TTTATACTATAGCAAATTGT
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKKTITCILLTAGLTGYLSAQTPVQDKSDKNSGKVIRMDKQMFLDNIFDYTSGSTNWKYKGEKPAVIDFYATWCGPCRMV APLLKSLAKEYKDQIAVYKVDTDKQKELSAVMGIQSLPTIIFIPKTGQPQIIIGAANKATFRKAIEEVLLKE
Sequences:
>Translated_152_residues MKKTITCILLTAGLTGYLSAQTPVQDKSDKNSGKVIRMDKQMFLDNIFDYTSGSTNWKYKGEKPAVIDFYATWCGPCRMV APLLKSLAKEYKDQIAVYKVDTDKQKELSAVMGIQSLPTIIFIPKTGQPQIIIGAANKATFRKAIEEVLLKE >Mature_152_residues MKKTITCILLTAGLTGYLSAQTPVQDKSDKNSGKVIRMDKQMFLDNIFDYTSGSTNWKYKGEKPAVIDFYATWCGPCRMV APLLKSLAKEYKDQIAVYKVDTDKQKELSAVMGIQSLPTIIFIPKTGQPQIIIGAANKATFRKAIEEVLLKE
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788936, Length=134, Percent_Identity=34.3283582089552, Blast_Score=84, Evalue=3e-18, Organism=Escherichia coli, GI87082331, Length=90, Percent_Identity=30, Blast_Score=66, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71980562, Length=87, Percent_Identity=37.9310344827586, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71980565, Length=87, Percent_Identity=37.9310344827586, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17509965, Length=95, Percent_Identity=31.5789473684211, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321648, Length=85, Percent_Identity=41.1764705882353, Blast_Score=77, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323072, Length=84, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI24639826, Length=73, Percent_Identity=39.7260273972603, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI17530795, Length=74, Percent_Identity=40.5405405405405, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI17648013, Length=76, Percent_Identity=38.1578947368421, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI24583090, Length=76, Percent_Identity=38.1578947368421, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI24664269, Length=90, Percent_Identity=35.5555555555556, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 16958; Mature: 16958
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTITCILLTAGLTGYLSAQTPVQDKSDKNSGKVIRMDKQMFLDNIFDYTSGSTNWKYK CCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEC GEKPAVIDFYATWCGPCRMVAPLLKSLAKEYKDQIAVYKVDTDKQKELSAVMGIQSLPTI CCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCCCCEE IFIPKTGQPQIIIGAANKATFRKAIEEVLLKE EEEECCCCCEEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKKTITCILLTAGLTGYLSAQTPVQDKSDKNSGKVIRMDKQMFLDNIFDYTSGSTNWKYK CCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEC GEKPAVIDFYATWCGPCRMVAPLLKSLAKEYKDQIAVYKVDTDKQKELSAVMGIQSLPTI CCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCCCCEE IFIPKTGQPQIIIGAANKATFRKAIEEVLLKE EEEECCCCCEEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]