| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is macB1 [H]
Identifier: 150004886
GI number: 150004886
Start: 3026312
End: 3027592
Strand: Direct
Name: macB1 [H]
Synonym: BVU_2349
Alternate gene names: 150004886
Gene position: 3026312-3027592 (Clockwise)
Preceding gene: 150004885
Following gene: 150004887
Centisome position: 58.61
GC content: 43.64
Gene sequence:
>1281_bases ATGATAAAACTATATATTAAACAGGCTTTTTACCAACTTCGTGAGAATAGGCTCATCAGCTTGGTTTCTATCATAGGAAC GGCATTGGCTATTTGTATGATCATGGTCATTGTCCTGGTGTTGGAAGTACGCATTACGGATTGTGTGCCCGAGGTGAACC GTTCACGTTCTCTTTATATGAAAGCGATGTCTATTCATCAGAAAGGAGATACCAGTGATAATTCATCAAACGGCTGTATG TCACTCACAGTGGCTAAAGAGTGTTTTAAGGCACTTACTGTTCCTGAGGCGGTAACTATAGTGTCTACAGGAGGCAGGAT GCGTATTTCTGTACCTGCTGGAAAAATGATGACAGTGGATAACCTTGAAACTGACGATACCTTTTGGAAAGTGTTCTCTT TTGATTTTATTGCCGGAAAGCCGTTTACGGCTGCCGATAGTGAAAGCGGACTTCCTAAGGTTGTACTTAGTGCTTCTGTG GCCCGGAATTTGTTTGGTACGGTAGAAGCGGTAGGACGTACGGTCCAACTCAACTTGGCCGATTATACGGTAGTGGGTGT TGTGAAAGATGTATCCAAACTGGCTGTTTCTTCTTATGCGCAGATTTGGATACCTTTCAATTCAACAGAAATAGCCAGGA AGTGCTGGTATGACAATGCGATGGGAACTTTTCGTGTGGTCATTCTGGCACATTCGGAGAAAGATTTTCCTGCCATCAGA GAAGAGGCGGAACGCCTGCGTCAGAAATTCAATGACGGATTGCAGGATTCCGAAATTTTTTATCGTGGACAACCCGATGA TCGTTTCTCTTTTATCTTTCGTCACTGGGGAAGAGAGTTACAGGCGAAGGAAGCTTATTTGCACTACCTGTTGGTGATTG TTATTTTATTGCTGGTACCGGCTATAAATTTGAGTAGCATGACTTTGTCCCGTATGCGGAAGCGCATGTCGGAAATAGGG GTGAGGAAGGCATTTGGTGCTACTGCCAATGTCTTGTTGAGGCAAGTGTTTTATGAAAATTTATTATTGACGCTCATAGC CGGAGCAGTAGGAATGCTTTTCAGTTATGCATGTACTTTTTTATTGAATGATTTCTTATTTTCCAATAGCGAGAACCGTG CCCAAATAGGAGAAACCAGTCTTTCGGCAGATATGTTGTTCAGTCCCTGGATATTCTTGGCCGCATTCATTTTCTGCCTG CTCTTGAATTTGCTGTCAGCGTGCATCCCTGCCTGGAGGGCATCGCGCATGAATATTACGGACGCTTTAAACCAACGTTA G
Upstream 100 bases:
>100_bases TTGGATTCCCGCACGTAAGGCTATGAAAGTTCAGCCGGCGGAAGCATTGCATAATGAGTAATCTCTTTTTTGTTAAAAGG TTTTAGAGCATAGCACAAAC
Downstream 100 bases:
>100_bases ATCATGAACAGGAATTTATTGAAACAGATATGGAACGAGCGCCGCAGCAATGCGTTTCTGTGGATGGAACTTTTTGTGGT GTTTGTCATATTATGGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MIKLYIKQAFYQLRENRLISLVSIIGTALAICMIMVIVLVLEVRITDCVPEVNRSRSLYMKAMSIHQKGDTSDNSSNGCM SLTVAKECFKALTVPEAVTIVSTGGRMRISVPAGKMMTVDNLETDDTFWKVFSFDFIAGKPFTAADSESGLPKVVLSASV ARNLFGTVEAVGRTVQLNLADYTVVGVVKDVSKLAVSSYAQIWIPFNSTEIARKCWYDNAMGTFRVVILAHSEKDFPAIR EEAERLRQKFNDGLQDSEIFYRGQPDDRFSFIFRHWGRELQAKEAYLHYLLVIVILLLVPAINLSSMTLSRMRKRMSEIG VRKAFGATANVLLRQVFYENLLLTLIAGAVGMLFSYACTFLLNDFLFSNSENRAQIGETSLSADMLFSPWIFLAAFIFCL LLNLLSACIPAWRASRMNITDALNQR
Sequences:
>Translated_426_residues MIKLYIKQAFYQLRENRLISLVSIIGTALAICMIMVIVLVLEVRITDCVPEVNRSRSLYMKAMSIHQKGDTSDNSSNGCM SLTVAKECFKALTVPEAVTIVSTGGRMRISVPAGKMMTVDNLETDDTFWKVFSFDFIAGKPFTAADSESGLPKVVLSASV ARNLFGTVEAVGRTVQLNLADYTVVGVVKDVSKLAVSSYAQIWIPFNSTEIARKCWYDNAMGTFRVVILAHSEKDFPAIR EEAERLRQKFNDGLQDSEIFYRGQPDDRFSFIFRHWGRELQAKEAYLHYLLVIVILLLVPAINLSSMTLSRMRKRMSEIG VRKAFGATANVLLRQVFYENLLLTLIAGAVGMLFSYACTFLLNDFLFSNSENRAQIGETSLSADMLFSPWIFLAAFIFCL LLNLLSACIPAWRASRMNITDALNQR >Mature_426_residues MIKLYIKQAFYQLRENRLISLVSIIGTALAICMIMVIVLVLEVRITDCVPEVNRSRSLYMKAMSIHQKGDTSDNSSNGCM SLTVAKECFKALTVPEAVTIVSTGGRMRISVPAGKMMTVDNLETDDTFWKVFSFDFIAGKPFTAADSESGLPKVVLSASV ARNLFGTVEAVGRTVQLNLADYTVVGVVKDVSKLAVSSYAQIWIPFNSTEIARKCWYDNAMGTFRVVILAHSEKDFPAIR EEAERLRQKFNDGLQDSEIFYRGQPDDRFSFIFRHWGRELQAKEAYLHYLLVIVILLLVPAINLSSMTLSRMRKRMSEIG VRKAFGATANVLLRQVFYENLLLTLIAGAVGMLFSYACTFLLNDFLFSNSENRAQIGETSLSADMLFSPWIFLAAFIFCL LLNLLSACIPAWRASRMNITDALNQR
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=301, Percent_Identity=26.2458471760797, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 47778; Mature: 47778
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLYIKQAFYQLRENRLISLVSIIGTALAICMIMVIVLVLEVRITDCVPEVNRSRSLYM CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KAMSIHQKGDTSDNSSNGCMSLTVAKECFKALTVPEAVTIVSTGGRMRISVPAGKMMTVD HHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEC NLETDDTFWKVFSFDFIAGKPFTAADSESGLPKVVLSASVARNLFGTVEAVGRTVQLNLA CCCCCCHHHHHHEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC DYTVVGVVKDVSKLAVSSYAQIWIPFNSTEIARKCWYDNAMGTFRVVILAHSEKDFPAIR CCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHH EEAERLRQKFNDGLQDSEIFYRGQPDDRFSFIFRHWGRELQAKEAYLHYLLVIVILLLVP HHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC AINLSSMTLSRMRKRMSEIGVRKAFGATANVLLRQVFYENLLLTLIAGAVGMLFSYACTF CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNDFLFSNSENRAQIGETSLSADMLFSPWIFLAAFIFCLLLNLLSACIPAWRASRMNIT HHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DALNQR HHHCCC >Mature Secondary Structure MIKLYIKQAFYQLRENRLISLVSIIGTALAICMIMVIVLVLEVRITDCVPEVNRSRSLYM CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KAMSIHQKGDTSDNSSNGCMSLTVAKECFKALTVPEAVTIVSTGGRMRISVPAGKMMTVD HHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEC NLETDDTFWKVFSFDFIAGKPFTAADSESGLPKVVLSASVARNLFGTVEAVGRTVQLNLA CCCCCCHHHHHHEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC DYTVVGVVKDVSKLAVSSYAQIWIPFNSTEIARKCWYDNAMGTFRVVILAHSEKDFPAIR CCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHH EEAERLRQKFNDGLQDSEIFYRGQPDDRFSFIFRHWGRELQAKEAYLHYLLVIVILLLVP HHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC AINLSSMTLSRMRKRMSEIGVRKAFGATANVLLRQVFYENLLLTLIAGAVGMLFSYACTF CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNDFLFSNSENRAQIGETSLSADMLFSPWIFLAAFIFCLLLNLLSACIPAWRASRMNIT HHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DALNQR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA