| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004885
Identifier: 150004885
GI number: 150004885
Start: 3025022
End: 3026272
Strand: Direct
Name: 150004885
Synonym: BVU_2348
Alternate gene names: NA
Gene position: 3025022-3026272 (Clockwise)
Preceding gene: 150004884
Following gene: 150004886
Centisome position: 58.59
GC content: 42.29
Gene sequence:
>1251_bases ATGAATAAGAAACTATTTACTCAGATAAAAAATGAATGGCGGTCTAATCTTTGGCTTGTCACCGAATTATTGTTGGTAAG TGTCGTTTTATGGTATATTGTGGACTATATGTATGTGCAGACCTCAATTTATAATGAACCACGGGGATTTGATATTTCTC ATTGCTATTTGGTGCAAATGGGACGTCTTACGGACAAAAGTCCAGACTTTATTCCCAATCAGACAGACGAGGAAAAGCGG CAGGATATCAAGGAACTTCTAAGTCGTCTTCAGCATAGACCGGATATAGAGGCAGCCGGATTAGGACAAAATTCTTACCC GTATAATGGCAGTAACAGCAGTGCGTCAGTGGTGTATGATACGTTACGTTCGCCGGGATGGACTATACGCAGATTGGTGT CTCCCGATTTTGTCCGTGTGTTCCGTTATCGTGGCACCCGTGGGGAGACCCCTGAACAACTGGCTGAGATGCTGAAACAT CCGAAGAATTTCTTAGCTTCAGATAATCTTTATAAACGGCGCTATGGATGTGATTTGACTTCATTGGTAGACAAACAATT TTATTTGTTCGGGGATACAACAAATACATATAATTTAGCGGCTTCTTTGCAGGTTGTGCGTTATGGGGATTATTTTGAGG CATGGAACAGTTACTGCATGGTGGCTCCTATGCCGGAAGAATGGTATGATTTGGGCACGGAGCTTTGTGTACGCGTAAAA GAGGATCAAGATCGTGATTTTATAGCCCGTTTGAAAGCGGATAGTGAGAAACTGTATCGCGTGGGCAATGTGTTTATCGC GGATGTGCGTTCTTTTACCGATATCCGTCGTAACTTTCAGCAGTCACATACGAATGCCTGGAACAGTTACCTTTTCGGAA TGGGTTTCTTGTTGTTGAATATATTCTTGGGATTGCTAGGTACTTTCTGGTTCCGTACTCAGCAACGACGTGGGGAGATT GCATTGATGAAATCATTGGGTGGAACAGATCATAGTATCTTTGTCCGTCAGTTGGCAGAGGGATTGATATTATTGGCGGT GGCCACAATTCCTGCGATTTTTATTGATTGGAATCTGGCAAATAGTGAATTGAATGCTTGGATGAATGGCACTACTATTG AAGGTGGACGTTTCATAATAACAGTTCTTATTTCCTTTATTTTGATTGCATTGATGATTGTAGTAGGCATTTGGATTCCC GCACGTAAGGCTATGAAAGTTCAGCCGGCGGAAGCATTGCATAATGAGTAA
Upstream 100 bases:
>100_bases AGCGGCATTCCTGCTTGGAGGGCTTCAAGGACTAGCATTGTCAATGCGCTGGGAGGAAGGATTCACTAAGGTGATAACGA ATTAAAAGTAAAGAATCAAG
Downstream 100 bases:
>100_bases TCTCTTTTTTGTTAAAAGGTTTTAGAGCATAGCACAAACATGATAAAACTATATATTAAACAGGCTTTTTACCAACTTCG TGAGAATAGGCTCATCAGCT
Product: putative ABC transporter permease component
Products: NA
Alternate protein names: Efflux ABC Transporter Permease Protein; ABC Transporter Permease Component; ABC Transporter Permease Protein
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MNKKLFTQIKNEWRSNLWLVTELLLVSVVLWYIVDYMYVQTSIYNEPRGFDISHCYLVQMGRLTDKSPDFIPNQTDEEKR QDIKELLSRLQHRPDIEAAGLGQNSYPYNGSNSSASVVYDTLRSPGWTIRRLVSPDFVRVFRYRGTRGETPEQLAEMLKH PKNFLASDNLYKRRYGCDLTSLVDKQFYLFGDTTNTYNLAASLQVVRYGDYFEAWNSYCMVAPMPEEWYDLGTELCVRVK EDQDRDFIARLKADSEKLYRVGNVFIADVRSFTDIRRNFQQSHTNAWNSYLFGMGFLLLNIFLGLLGTFWFRTQQRRGEI ALMKSLGGTDHSIFVRQLAEGLILLAVATIPAIFIDWNLANSELNAWMNGTTIEGGRFIITVLISFILIALMIVVGIWIP ARKAMKVQPAEALHNE
Sequences:
>Translated_416_residues MNKKLFTQIKNEWRSNLWLVTELLLVSVVLWYIVDYMYVQTSIYNEPRGFDISHCYLVQMGRLTDKSPDFIPNQTDEEKR QDIKELLSRLQHRPDIEAAGLGQNSYPYNGSNSSASVVYDTLRSPGWTIRRLVSPDFVRVFRYRGTRGETPEQLAEMLKH PKNFLASDNLYKRRYGCDLTSLVDKQFYLFGDTTNTYNLAASLQVVRYGDYFEAWNSYCMVAPMPEEWYDLGTELCVRVK EDQDRDFIARLKADSEKLYRVGNVFIADVRSFTDIRRNFQQSHTNAWNSYLFGMGFLLLNIFLGLLGTFWFRTQQRRGEI ALMKSLGGTDHSIFVRQLAEGLILLAVATIPAIFIDWNLANSELNAWMNGTTIEGGRFIITVLISFILIALMIVVGIWIP ARKAMKVQPAEALHNE >Mature_416_residues MNKKLFTQIKNEWRSNLWLVTELLLVSVVLWYIVDYMYVQTSIYNEPRGFDISHCYLVQMGRLTDKSPDFIPNQTDEEKR QDIKELLSRLQHRPDIEAAGLGQNSYPYNGSNSSASVVYDTLRSPGWTIRRLVSPDFVRVFRYRGTRGETPEQLAEMLKH PKNFLASDNLYKRRYGCDLTSLVDKQFYLFGDTTNTYNLAASLQVVRYGDYFEAWNSYCMVAPMPEEWYDLGTELCVRVK EDQDRDFIARLKADSEKLYRVGNVFIADVRSFTDIRRNFQQSHTNAWNSYLFGMGFLLLNIFLGLLGTFWFRTQQRRGEI ALMKSLGGTDHSIFVRQLAEGLILLAVATIPAIFIDWNLANSELNAWMNGTTIEGGRFIITVLISFILIALMIVVGIWIP ARKAMKVQPAEALHNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48070; Mature: 48070
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLFTQIKNEWRSNLWLVTELLLVSVVLWYIVDYMYVQTSIYNEPRGFDISHCYLVQM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GRLTDKSPDFIPNQTDEEKRQDIKELLSRLQHRPDIEAAGLGQNSYPYNGSNSSASVVYD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH TLRSPGWTIRRLVSPDFVRVFRYRGTRGETPEQLAEMLKHPKNFLASDNLYKRRYGCDLT HHCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHCCCCHHHHHHCCCHH SLVDKQFYLFGDTTNTYNLAASLQVVRYGDYFEAWNSYCMVAPMPEEWYDLGTELCVRVK HHHCCCEEEEECCCCCEEHHEEEEEEEECCHHHHHCCEEEECCCCHHHHHHHHHHHHHCC EDQDRDFIARLKADSEKLYRVGNVFIADVRSFTDIRRNFQQSHTNAWNSYLFGMGFLLLN CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLGLLGTFWFRTQQRRGEIALMKSLGGTDHSIFVRQLAEGLILLAVATIPAIFIDWNLA HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCC NSELNAWMNGTTIEGGRFIITVLISFILIALMIVVGIWIPARKAMKVQPAEALHNE CHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MNKKLFTQIKNEWRSNLWLVTELLLVSVVLWYIVDYMYVQTSIYNEPRGFDISHCYLVQM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GRLTDKSPDFIPNQTDEEKRQDIKELLSRLQHRPDIEAAGLGQNSYPYNGSNSSASVVYD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH TLRSPGWTIRRLVSPDFVRVFRYRGTRGETPEQLAEMLKHPKNFLASDNLYKRRYGCDLT HHCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHCCCCHHHHHHCCCHH SLVDKQFYLFGDTTNTYNLAASLQVVRYGDYFEAWNSYCMVAPMPEEWYDLGTELCVRVK HHHCCCEEEEECCCCCEEHHEEEEEEEECCHHHHHCCEEEECCCCHHHHHHHHHHHHHCC EDQDRDFIARLKADSEKLYRVGNVFIADVRSFTDIRRNFQQSHTNAWNSYLFGMGFLLLN CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLGLLGTFWFRTQQRRGEIALMKSLGGTDHSIFVRQLAEGLILLAVATIPAIFIDWNLA HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCC NSELNAWMNGTTIEGGRFIITVLISFILIALMIVVGIWIPARKAMKVQPAEALHNE CHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA