Click here to switch to the map view.

The map label for this gene is ydgM [C]

Identifier: 150004851

GI number: 150004851

Start: 2988582

End: 2988812

Strand: Reverse

Name: ydgM [C]

Synonym: BVU_2314

Alternate gene names: 150004851

Gene position: 2988812-2988582 (Counterclockwise)

Preceding gene: 150004852

Following gene: 150004850

Centisome position: 57.89

GC content: 43.29

Gene sequence:

>231_bases
ATGGCAAAGATTAAAGGTGCTATTGTAGTAGACACAGAGCGTTGCAAAGGTTGCAATCTATGTGTAGTGGCATGTCCGCT
GCATGTAATCGCGCTCAATGCCAAACAAGTGAATAAAAAAGGATACACATTCGCCCACCAGGTATTAGAAGATACCTGCA
ATGGTTGCGCATCATGTGCCACAGTCTGTCCGGACGGATGCATCACTGTGTATAAAGTAAAACAACAATAA

Upstream 100 bases:

>100_bases
GAGCGTAATCCGGAAAGTCCGGCCGTTTCCGCCCGTAACATGATTATGAATATTCTGAATTTCTATAACAAAGACATGTA
TAATCAATAATAACTAACCC

Downstream 100 bases:

>100_bases
ATGTAACAAATATGGCAGAAGAAGTCGTTTTAATGAAGGGAAATGAAGCCATAGCCCACGCCGCTATCCGTATCGGAGTA
GACGGTTACTTTGGCTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: 2-Oxoglutarate Ferredoxin Oxidoreductase Delta Subunit; Ferredoxin 4Fe-4S; 2-Oxoglutarate Synthase Delta Subunit; 2-Ketoglutarate Ferredoxin Oxidoreductase Subunit Delta; Photosystem I Iron-Sulfur Protein PsaC

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MAKIKGAIVVDTERCKGCNLCVVACPLHVIALNAKQVNKKGYTFAHQVLEDTCNGCASCATVCPDGCITVYKVKQQ

Sequences:

>Translated_76_residues
MAKIKGAIVVDTERCKGCNLCVVACPLHVIALNAKQVNKKGYTFAHQVLEDTCNGCASCATVCPDGCITVYKVKQQ
>Mature_75_residues
AKIKGAIVVDTERCKGCNLCVVACPLHVIALNAKQVNKKGYTFAHQVLEDTCNGCASCATVCPDGCITVYKVKQQ

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8117; Mature: 7985

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
13.2 %Cys+Met (Translated Protein)
12.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
12.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIKGAIVVDTERCKGCNLCVVACPLHVIALNAKQVNKKGYTFAHQVLEDTCNGCASCA
CCCCCCEEEEECCCCCCCCEEEEECCEEEEEECHHHCCCCCCHHHHHHHHHHHCHHHHHH
TVCPDGCITVYKVKQQ
HCCCCCCEEEEEEECC
>Mature Secondary Structure 
AKIKGAIVVDTERCKGCNLCVVACPLHVIALNAKQVNKKGYTFAHQVLEDTCNGCASCA
CCCCCEEEEECCCCCCCCEEEEECCEEEEEECHHHCCCCCCHHHHHHHHHHHCHHHHHH
TVCPDGCITVYKVKQQ
HCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA