| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004819
Identifier: 150004819
GI number: 150004819
Start: 2952149
End: 2955019
Strand: Reverse
Name: 150004819
Synonym: BVU_2282
Alternate gene names: NA
Gene position: 2955019-2952149 (Counterclockwise)
Preceding gene: 150004821
Following gene: 150004818
Centisome position: 57.23
GC content: 47.2
Gene sequence:
>2871_bases ATGAAAAAGATATTTTTGTCCTTCCTGCTGGTAATGGCAGGAATATCACACACTTTGGCACAAGGGTTAGATGGTAATGT GGAACAACGTCTAAAAGATTTTTTCACCCGGTACGAAACATCTTATGCCAACATAGGTAAATGTAAATTAGACCGTTATG AAGTAAATCATGACAAAAAAAGACTGAATGTATATGCCAGCCCCAGCTTCGGCTACCAACCGTTTACCCCCGAAAAGACA GAAGCTATCTACCGGTTACTTAGACAAAGCCTACCCGGTCCTGTAAATTATTACGATATAACCATCTATGCCGATGGCAA ATCAATCGAAGACCTGATTCCCAACTATCTGAGGAAGAAACAGGACAAAAGCCGCTTATGGCAACGGACAGATTATAAAG GTGATCCATGGGTAAAAAATATTTCCCGCCCCTTTACTGCCAGCAAAGGACTGGAAGGCAGACACATCGCCCTTTGGCAA AGCCACGGAAAATATTATAAAAAGGACAAGGGATGTTGGGAATGGCAACGTCCCCGCCTGTTCTGTACCACAGAAGACTT GTTCACCCAATCATTCGTCATACCTTATATTATACCCATGCTGGAAAATGCGGGAGCCATAGTTTATACCCCTCGTGAAC GTGACTGGCAACGCAATGAGGTGATTGTGGATAATGATACCCATCCCCAAGGTTGCATCTATCAGGAGATAAAAAGCCGG AAAGGTAAATGGAAAACCGCCCCCACCCCGGCATTCGCTCAAAAACGATTGGTTTACCGGGACGGACAAAATCCTTTTGA AGAAGGTACAGCCCGCTTTGCCTCCACCGAGAAAAAACCGGAAAAAGCCTTTGCACAATGGATTCCCCATATTCCCGAAA CAGGAAAATATGCCGTCTATGTGACTTATCAGACTTTACCCGGAAGTGTGAGTGACGCTAAATATCTGGTTTTCCATAAA GGGGGTGTCACCGAATTTCTGGTCAACCAACAAATAGGGGGAGGAACCTGGGTTTATCTGGGCACTTTTGAATTCGACAA AGGAACCAACGATTACGGTATGGTGGTACTAAGTAATGAGAGCAGACAAAAAGGAGTGGTATGCGCCGATGCCGTCCGTT TTGGCGGAGGAATGGGAAACATATCGCGCGGTGGAAAAACCAGCGGCCTGCCCCGTTATCTGGAAGGGGCACGCTATGCC GCACAATGGTCGGGTTTTCCTTATTCGGTTTACAGTCCCAGCGAAGGTAAGAATGACTATACCGATGATATAAACGCCCG CAGCTGGATAATAAACTATCTCAGCGGAAATTCTGTGTACAATCCAAAGGAGAAGGGATTGGGCGTTCCTTTTGAAATGA CCTTGGGAGTGCACAGCGATGCAGGTTTTTCCAAAGAAGATTATTTAATAGGCACGCTGGGTATCTATACCACCGATTAT AATAATGGTGAACTGAACGCCGGTATCTCCCGTTATGCTTCCCGCGACTTGGCGGACATGGTACTGACCGGTCTGCAACA GGATATCTCCGCCCAATTCGGTATCCGGTGGCAACGCCGCAGCCTGTGGAACCGCAATTACAGCGAAACCCGTCTGCCTG CCGTTCCCTCGATGATTCTGGAACTCCTCTCCCACCAGAACTTCGCCGATTTGAAATTGGGGCACGATCCGCGTTTCAAG TTTACCGTAGGACGTTCTGTTTACAAATCCATACTAAAATACCTGAGTACCATGCATGGGACGGATTACGTAGTCCAACC TTTACCGGTAAATAACTTTGCCATTCACTCCGGAAGTAGGAAAAACACCTTCCAACTAACTTGGCAAGCGGTAGACGACC CGTTGGAACCGACTGCCAAAGCTCAACAATACATAGTCTATACCCGTCTGGGACATGGTGGATTTGACAATGGAACGTTA GTACGCGGTACTGAATATACCTTCGAAGCCGAACCGGGACTGGTATATAGTTTCAAAATAACCGCAGTCAACAAGGGCGG AGAAAGTTTTCCTTCCGAAATCCTGTCAGCCTATCAGGCAAAGAAAAGTAAAGGAACAATCTTGATAGTCAACGGATTCG ACCGTTTAAGCAGACCTGCTACCGTAGGATCTCCTTTCTTGCAAGGCTTTGACTTGAATACGGATCCGGGAATACCTTAT ATAAATACACCCGCCTTCTGCGGAACGCAACAAAGCTTCGACCGCAGCCGCATAGGACGGGAGACTAAAGACGGGCTGGG ATATAGCGGCAGCGAACTGGAAGGAATGTTGATAGCCGGAAATACTTTCGATTATCCGTTCATTCATGGAAAAGCCATCC AGGCAGCCGGAGGATACTCTTTTGTATCGTGTAGTGATGAAGCCGTTGAAAATGGTTTTGTCCGGCTGGCAGATTACCCC ATTACAGACCTGATATTCGGAGCCGACAGGCGTCCTTTCTCCCACACATTGCAACAGTTGCTCACAACCTATTGTCAAGG AGGCGGCAACCTGATGCTCAGCGGCTCGTATATAGGAAGCAACATGAACAGTCCCACAGCACTGAACTTCACCGAAAACA TATTAAAATATAGTTTCGGAGGCAGCATGATAAATTCCACTTCGGGAGAAATATATGGAGCCAACACCCGTTTCAGTATT CCCCGCACTATCAACGAGCAAACATACGCCGTACCCGCTCCCGACTGTCTGACCCCGATAGCCCCTGCTTACTCCGCTTT TGTATATAATCCGGGCAGTTACAGTGCCGGTATCGCCTATAAAGGCAAATATCGGACTTTTGTCCTGGGTTTCCCCTTTG AAAGCATTCAGGGAGTGAAGGAAAGAGCACGGGTAATGAGTGCCATCCTGGGCTTCTTTGGCAGCAAGTGA
Upstream 100 bases:
>100_bases AAAGATAATTCGTTTCATTTAGGTTCATTATAGATTAGTTAGAATGACAAAACTAACAAAAATTCCTAACTTCGCAACCA TAAATAAAGAAGAAAACAAC
Downstream 100 bases:
>100_bases TATTTTTAAACGAAAATAAAAGGGCAAATAAGAGGTTATTTCATAAAAACGCCTAACTTTGTCCGTATAAACCATTAAAA TAAAACGACTATGTACACTA
Product: xanthan lyase
Products: NA
Alternate protein names: Xanthan Lyase; N-Acetylmuramoyl-L-Alanine Amidase; Exported Xanthan Lyase/N-Acetylmuramoyl-L-Alanine Amidase; Fibronectin Type IIIi Domain Protein
Number of amino acids: Translated: 956; Mature: 956
Protein sequence:
>956_residues MKKIFLSFLLVMAGISHTLAQGLDGNVEQRLKDFFTRYETSYANIGKCKLDRYEVNHDKKRLNVYASPSFGYQPFTPEKT EAIYRLLRQSLPGPVNYYDITIYADGKSIEDLIPNYLRKKQDKSRLWQRTDYKGDPWVKNISRPFTASKGLEGRHIALWQ SHGKYYKKDKGCWEWQRPRLFCTTEDLFTQSFVIPYIIPMLENAGAIVYTPRERDWQRNEVIVDNDTHPQGCIYQEIKSR KGKWKTAPTPAFAQKRLVYRDGQNPFEEGTARFASTEKKPEKAFAQWIPHIPETGKYAVYVTYQTLPGSVSDAKYLVFHK GGVTEFLVNQQIGGGTWVYLGTFEFDKGTNDYGMVVLSNESRQKGVVCADAVRFGGGMGNISRGGKTSGLPRYLEGARYA AQWSGFPYSVYSPSEGKNDYTDDINARSWIINYLSGNSVYNPKEKGLGVPFEMTLGVHSDAGFSKEDYLIGTLGIYTTDY NNGELNAGISRYASRDLADMVLTGLQQDISAQFGIRWQRRSLWNRNYSETRLPAVPSMILELLSHQNFADLKLGHDPRFK FTVGRSVYKSILKYLSTMHGTDYVVQPLPVNNFAIHSGSRKNTFQLTWQAVDDPLEPTAKAQQYIVYTRLGHGGFDNGTL VRGTEYTFEAEPGLVYSFKITAVNKGGESFPSEILSAYQAKKSKGTILIVNGFDRLSRPATVGSPFLQGFDLNTDPGIPY INTPAFCGTQQSFDRSRIGRETKDGLGYSGSELEGMLIAGNTFDYPFIHGKAIQAAGGYSFVSCSDEAVENGFVRLADYP ITDLIFGADRRPFSHTLQQLLTTYCQGGGNLMLSGSYIGSNMNSPTALNFTENILKYSFGGSMINSTSGEIYGANTRFSI PRTINEQTYAVPAPDCLTPIAPAYSAFVYNPGSYSAGIAYKGKYRTFVLGFPFESIQGVKERARVMSAILGFFGSK
Sequences:
>Translated_956_residues MKKIFLSFLLVMAGISHTLAQGLDGNVEQRLKDFFTRYETSYANIGKCKLDRYEVNHDKKRLNVYASPSFGYQPFTPEKT EAIYRLLRQSLPGPVNYYDITIYADGKSIEDLIPNYLRKKQDKSRLWQRTDYKGDPWVKNISRPFTASKGLEGRHIALWQ SHGKYYKKDKGCWEWQRPRLFCTTEDLFTQSFVIPYIIPMLENAGAIVYTPRERDWQRNEVIVDNDTHPQGCIYQEIKSR KGKWKTAPTPAFAQKRLVYRDGQNPFEEGTARFASTEKKPEKAFAQWIPHIPETGKYAVYVTYQTLPGSVSDAKYLVFHK GGVTEFLVNQQIGGGTWVYLGTFEFDKGTNDYGMVVLSNESRQKGVVCADAVRFGGGMGNISRGGKTSGLPRYLEGARYA AQWSGFPYSVYSPSEGKNDYTDDINARSWIINYLSGNSVYNPKEKGLGVPFEMTLGVHSDAGFSKEDYLIGTLGIYTTDY NNGELNAGISRYASRDLADMVLTGLQQDISAQFGIRWQRRSLWNRNYSETRLPAVPSMILELLSHQNFADLKLGHDPRFK FTVGRSVYKSILKYLSTMHGTDYVVQPLPVNNFAIHSGSRKNTFQLTWQAVDDPLEPTAKAQQYIVYTRLGHGGFDNGTL VRGTEYTFEAEPGLVYSFKITAVNKGGESFPSEILSAYQAKKSKGTILIVNGFDRLSRPATVGSPFLQGFDLNTDPGIPY INTPAFCGTQQSFDRSRIGRETKDGLGYSGSELEGMLIAGNTFDYPFIHGKAIQAAGGYSFVSCSDEAVENGFVRLADYP ITDLIFGADRRPFSHTLQQLLTTYCQGGGNLMLSGSYIGSNMNSPTALNFTENILKYSFGGSMINSTSGEIYGANTRFSI PRTINEQTYAVPAPDCLTPIAPAYSAFVYNPGSYSAGIAYKGKYRTFVLGFPFESIQGVKERARVMSAILGFFGSK >Mature_956_residues MKKIFLSFLLVMAGISHTLAQGLDGNVEQRLKDFFTRYETSYANIGKCKLDRYEVNHDKKRLNVYASPSFGYQPFTPEKT EAIYRLLRQSLPGPVNYYDITIYADGKSIEDLIPNYLRKKQDKSRLWQRTDYKGDPWVKNISRPFTASKGLEGRHIALWQ SHGKYYKKDKGCWEWQRPRLFCTTEDLFTQSFVIPYIIPMLENAGAIVYTPRERDWQRNEVIVDNDTHPQGCIYQEIKSR KGKWKTAPTPAFAQKRLVYRDGQNPFEEGTARFASTEKKPEKAFAQWIPHIPETGKYAVYVTYQTLPGSVSDAKYLVFHK GGVTEFLVNQQIGGGTWVYLGTFEFDKGTNDYGMVVLSNESRQKGVVCADAVRFGGGMGNISRGGKTSGLPRYLEGARYA AQWSGFPYSVYSPSEGKNDYTDDINARSWIINYLSGNSVYNPKEKGLGVPFEMTLGVHSDAGFSKEDYLIGTLGIYTTDY NNGELNAGISRYASRDLADMVLTGLQQDISAQFGIRWQRRSLWNRNYSETRLPAVPSMILELLSHQNFADLKLGHDPRFK FTVGRSVYKSILKYLSTMHGTDYVVQPLPVNNFAIHSGSRKNTFQLTWQAVDDPLEPTAKAQQYIVYTRLGHGGFDNGTL VRGTEYTFEAEPGLVYSFKITAVNKGGESFPSEILSAYQAKKSKGTILIVNGFDRLSRPATVGSPFLQGFDLNTDPGIPY INTPAFCGTQQSFDRSRIGRETKDGLGYSGSELEGMLIAGNTFDYPFIHGKAIQAAGGYSFVSCSDEAVENGFVRLADYP ITDLIFGADRRPFSHTLQQLLTTYCQGGGNLMLSGSYIGSNMNSPTALNFTENILKYSFGGSMINSTSGEIYGANTRFSI PRTINEQTYAVPAPDCLTPIAPAYSAFVYNPGSYSAGIAYKGKYRTFVLGFPFESIQGVKERARVMSAILGFFGSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106995; Mature: 106995
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFLSFLLVMAGISHTLAQGLDGNVEQRLKDFFTRYETSYANIGKCKLDRYEVNHDKK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE RLNVYASPSFGYQPFTPEKTEAIYRLLRQSLPGPVNYYDITIYADGKSIEDLIPNYLRKK EEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHH QDKSRLWQRTDYKGDPWVKNISRPFTASKGLEGRHIALWQSHGKYYKKDKGCWEWQRPRL HHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE FCTTEDLFTQSFVIPYIIPMLENAGAIVYTPRERDWQRNEVIVDNDTHPQGCIYQEIKSR EEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHC KGKWKTAPTPAFAQKRLVYRDGQNPFEEGTARFASTEKKPEKAFAQWIPHIPETGKYAVY CCCCCCCCCCHHHHHHHEEECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEE VTYQTLPGSVSDAKYLVFHKGGVTEFLVNQQIGGGTWVYLGTFEFDKGTNDYGMVVLSNE EEEEECCCCCCCCEEEEEECCCCHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEECCC SRQKGVVCADAVRFGGGMGNISRGGKTSGLPRYLEGARYAAQWSGFPYSVYSPSEGKNDY CCCCCCEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCEEEECCCCCCCCC TDDINARSWIINYLSGNSVYNPKEKGLGVPFEMTLGVHSDAGFSKEDYLIGTLGIYTTDY CCCCCCCEEEEEEECCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECC NNGELNAGISRYASRDLADMVLTGLQQDISAQFGIRWQRRSLWNRNYSETRLPAVPSMIL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHCCCCCCCCCCHHHHHHH ELLSHQNFADLKLGHDPRFKFTVGRSVYKSILKYLSTMHGTDYVVQPLPVNNFAIHSGSR HHHCCCCCCEEECCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCC KNTFQLTWQAVDDPLEPTAKAQQYIVYTRLGHGGFDNGTLVRGTEYTFEAEPGLVYSFKI CCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCEEEEECCCCEEEEEEE TAVNKGGESFPSEILSAYQAKKSKGTILIVNGFDRLSRPATVGSPFLQGFDLNTDPGIPY EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCHHHCCCCCCCCCCCCE INTPAFCGTQQSFDRSRIGRETKDGLGYSGSELEGMLIAGNTFDYPFIHGKAIQAAGGYS ECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCEEECCCCEE FVSCSDEAVENGFVRLADYPITDLIFGADRRPFSHTLQQLLTTYCQGGGNLMLSGSYIGS EEECCHHHHHCCEEEEECCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCEECC NMNSPTALNFTENILKYSFGGSMINSTSGEIYGANTRFSIPRTINEQTYAVPAPDCLTPI CCCCCEEECHHHHHHHHHCCCCEECCCCCEEEECCCEEECCCCCCCCEEECCCCHHHCCC APAYSAFVYNPGSYSAGIAYKGKYRTFVLGFPFESIQGVKERARVMSAILGFFGSK CCCCCEEEECCCCCCCCEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIFLSFLLVMAGISHTLAQGLDGNVEQRLKDFFTRYETSYANIGKCKLDRYEVNHDKK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE RLNVYASPSFGYQPFTPEKTEAIYRLLRQSLPGPVNYYDITIYADGKSIEDLIPNYLRKK EEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHH QDKSRLWQRTDYKGDPWVKNISRPFTASKGLEGRHIALWQSHGKYYKKDKGCWEWQRPRL HHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE FCTTEDLFTQSFVIPYIIPMLENAGAIVYTPRERDWQRNEVIVDNDTHPQGCIYQEIKSR EEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHC KGKWKTAPTPAFAQKRLVYRDGQNPFEEGTARFASTEKKPEKAFAQWIPHIPETGKYAVY CCCCCCCCCCHHHHHHHEEECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEE VTYQTLPGSVSDAKYLVFHKGGVTEFLVNQQIGGGTWVYLGTFEFDKGTNDYGMVVLSNE EEEEECCCCCCCCEEEEEECCCCHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEECCC SRQKGVVCADAVRFGGGMGNISRGGKTSGLPRYLEGARYAAQWSGFPYSVYSPSEGKNDY CCCCCCEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCEEEECCCCCCCCC TDDINARSWIINYLSGNSVYNPKEKGLGVPFEMTLGVHSDAGFSKEDYLIGTLGIYTTDY CCCCCCCEEEEEEECCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECC NNGELNAGISRYASRDLADMVLTGLQQDISAQFGIRWQRRSLWNRNYSETRLPAVPSMIL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHCCCCCCCCCCHHHHHHH ELLSHQNFADLKLGHDPRFKFTVGRSVYKSILKYLSTMHGTDYVVQPLPVNNFAIHSGSR HHHCCCCCCEEECCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCC KNTFQLTWQAVDDPLEPTAKAQQYIVYTRLGHGGFDNGTLVRGTEYTFEAEPGLVYSFKI CCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCEEEEECCCCEEEEEEE TAVNKGGESFPSEILSAYQAKKSKGTILIVNGFDRLSRPATVGSPFLQGFDLNTDPGIPY EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCHHHCCCCCCCCCCCCE INTPAFCGTQQSFDRSRIGRETKDGLGYSGSELEGMLIAGNTFDYPFIHGKAIQAAGGYS ECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCEEECCCCEE FVSCSDEAVENGFVRLADYPITDLIFGADRRPFSHTLQQLLTTYCQGGGNLMLSGSYIGS EEECCHHHHHCCEEEEECCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCEECC NMNSPTALNFTENILKYSFGGSMINSTSGEIYGANTRFSIPRTINEQTYAVPAPDCLTPI CCCCCEEECHHHHHHHHHCCCCEECCCCCEEEECCCEEECCCCCCCCEEECCCCHHHCCC APAYSAFVYNPGSYSAGIAYKGKYRTFVLGFPFESIQGVKERARVMSAILGFFGSK CCCCCEEEECCCCCCCCEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA