Click here to switch to the map view.

The map label for this gene is ygiQ [C]

Identifier: 150004817

GI number: 150004817

Start: 2949800

End: 2951689

Strand: Reverse

Name: ygiQ [C]

Synonym: BVU_2280

Alternate gene names: 150004817

Gene position: 2951689-2949800 (Counterclockwise)

Preceding gene: 150004818

Following gene: 150004816

Centisome position: 57.17

GC content: 45.24

Gene sequence:

>1890_bases
TTGAAAGAATACAAACTTACAGACTGGTTGCCGACAACCAAGAAAGAAGTAGAGATGCGCGGATGGAATGAACTGGACGT
AATCTTGTTCAGCGGTGACGCCTACGTAGATCATCCTTCATTTGGTCCGGCAGTAATTGGAAGATTATTAGAGGCGCAAG
GTTTGAAAGTGGCCATTGTGCCTCAACCCAACTGGCGTGATGACCTGCGCGATTTTAAGAAGCTGGGACGTCCACGCCTC
TTTTTCGGTGTGTCCGCCGGATGTATGGACAGCATGGTAAACAAATACACTGCCAACAAGCGTTTGCGCAGCGAGGATGC
TTATACTCCCGACGGCCGCCACGACATGCGTCCCGAATATCCCAGCATCGTTTATACACAGATTTTAAAGAAAATCTATC
CCGACGTACCTGTCATTCTGGGAGGTATAGAGGCATCTTTGCGCCGTGTCACCCATTATGACTACTGGCAGGACTGCCTG
CGTAAATCAATTCTGATAGATTCCGGAGCCGATTTATTGATCTATGGAATGGGAGAGAAGCCGATTACGGAACTTTGCAA
GAGAACGAAAGAAAGCAAAGACAGTCAGGACGGAGCCCATCTACCCTTACAAAAGGATATTCCCCACGATATACCACAAA
CGGCTTATATTATCCGTAAGAAAGGATCAGTTCCGTCCGAGCACTCTGTAATTGAGTGTGTGAACGAAAAGCCAGACATC
ATCCTACACTCTCATGAAGCATGCCTGAAAGATAAAAAGAAACAAGCCGAGAACTTCCGCTTCATTGAAGAGGAAAGCAA
CAAGTACGAAGCCTCCCGCATCTTGCAAGATACAGGCAATGAAACAGTAGTAGTCAATCCGCCTTATCCTCCAATGAGCC
AAGGCGAACTGGATCATTCTTTTGATTTGCCCTATACGCGTATGCCTCATCCTAAATATAAAGGAAAACGCATTCCCGCA
TTCGACATGATTAAATTCTCGGTCAATCTGCACCGTGGTTGTTTTGGCGGATGCGCCTTTTGTACCATTTCCGCCCATCA
AGGGAAATTTATTGTAAGCCGAAGTAAAGAGAGTATCTTAAGAGAAGTGCGAGCCATAACTGAAATGCCTGATTTCAAAG
GCTATCTGAGTGACTTGGGAGGACCTAGCGCCAACATGTATGCCATGCGTGGTAAAGATGAGAAAATTTGCCGGCGATGC
AAACGGCCGTCATGTATCCATCCCAAAGTATGTCCCAATTTGAACACGGACCATCGCCCCTTATTGGATATTTATCATTC
GGTAGACGCACTTCCCGGTATCAAGAAAAGCTTTATCGGAAGCGGTGTACGCTATGACCTGTTACAATATCAAAGCAAAG
ATCCGGCAGTAAACCGAAGTACAGCTGAATATACCCGCGAACTGATAGCCCATCATGTCAGTGGGCGCTTGAAAGTGGCT
CCGGAACATACCAGCGACCAAGTGCTGCAAATCATGAGGAAACCTTCGTTTTCACAATTTTATGACTTCAAAAAGACTTT
CGACAAAATAAATAAGGAGTTGAATATGCGGCAGCAGATTATACCTTATTTTATAAGCAGCCATCCCGGATGTACAGAAG
AAGATATGGCAGAACTGGCAGTGATCACCAAGAAATTGGATTTCCATCTGGAACAAGTACAGGACTTTACTCCTACTCCG
ATGACCGTAGCCACTGAAACCTGGTACACAGGTTATCATCCATATACGTTGCAACCGGTATTTTCCGCTAAAACACCAAA
AGAAAAACTGGCTCAACGGATGTTCTTTTTCTGGTATAAACCCGAAGAACGACGTGCTATCATCAATGAATTGCGCAAAA
TAGGACGCGCTGATCTGATAGATAAGCTGTATGGTAAATACAAAGCCTGA

Upstream 100 bases:

>100_bases
TTATATCCAATGGGAGAAAGAGAAAAATAAAGATGAAGAAGAGATATAATAAACAATCTCTGTGTTCTCTGTAGCAAAAC
AAAAAAAACAGTATTTATCA

Downstream 100 bases:

>100_bases
GTTTTAAATTCACCACAGATTATACAGATTTGATCTGTGGTGAAACTGTTTTTTAACGTCTTGTTTACCTTTCATCGTGT
TTTGACGAAACACAGGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MKEYKLTDWLPTTKKEVEMRGWNELDVILFSGDAYVDHPSFGPAVIGRLLEAQGLKVAIVPQPNWRDDLRDFKKLGRPRL
FFGVSAGCMDSMVNKYTANKRLRSEDAYTPDGRHDMRPEYPSIVYTQILKKIYPDVPVILGGIEASLRRVTHYDYWQDCL
RKSILIDSGADLLIYGMGEKPITELCKRTKESKDSQDGAHLPLQKDIPHDIPQTAYIIRKKGSVPSEHSVIECVNEKPDI
ILHSHEACLKDKKKQAENFRFIEEESNKYEASRILQDTGNETVVVNPPYPPMSQGELDHSFDLPYTRMPHPKYKGKRIPA
FDMIKFSVNLHRGCFGGCAFCTISAHQGKFIVSRSKESILREVRAITEMPDFKGYLSDLGGPSANMYAMRGKDEKICRRC
KRPSCIHPKVCPNLNTDHRPLLDIYHSVDALPGIKKSFIGSGVRYDLLQYQSKDPAVNRSTAEYTRELIAHHVSGRLKVA
PEHTSDQVLQIMRKPSFSQFYDFKKTFDKINKELNMRQQIIPYFISSHPGCTEEDMAELAVITKKLDFHLEQVQDFTPTP
MTVATETWYTGYHPYTLQPVFSAKTPKEKLAQRMFFFWYKPEERRAIINELRKIGRADLIDKLYGKYKA

Sequences:

>Translated_629_residues
MKEYKLTDWLPTTKKEVEMRGWNELDVILFSGDAYVDHPSFGPAVIGRLLEAQGLKVAIVPQPNWRDDLRDFKKLGRPRL
FFGVSAGCMDSMVNKYTANKRLRSEDAYTPDGRHDMRPEYPSIVYTQILKKIYPDVPVILGGIEASLRRVTHYDYWQDCL
RKSILIDSGADLLIYGMGEKPITELCKRTKESKDSQDGAHLPLQKDIPHDIPQTAYIIRKKGSVPSEHSVIECVNEKPDI
ILHSHEACLKDKKKQAENFRFIEEESNKYEASRILQDTGNETVVVNPPYPPMSQGELDHSFDLPYTRMPHPKYKGKRIPA
FDMIKFSVNLHRGCFGGCAFCTISAHQGKFIVSRSKESILREVRAITEMPDFKGYLSDLGGPSANMYAMRGKDEKICRRC
KRPSCIHPKVCPNLNTDHRPLLDIYHSVDALPGIKKSFIGSGVRYDLLQYQSKDPAVNRSTAEYTRELIAHHVSGRLKVA
PEHTSDQVLQIMRKPSFSQFYDFKKTFDKINKELNMRQQIIPYFISSHPGCTEEDMAELAVITKKLDFHLEQVQDFTPTP
MTVATETWYTGYHPYTLQPVFSAKTPKEKLAQRMFFFWYKPEERRAIINELRKIGRADLIDKLYGKYKA
>Mature_629_residues
MKEYKLTDWLPTTKKEVEMRGWNELDVILFSGDAYVDHPSFGPAVIGRLLEAQGLKVAIVPQPNWRDDLRDFKKLGRPRL
FFGVSAGCMDSMVNKYTANKRLRSEDAYTPDGRHDMRPEYPSIVYTQILKKIYPDVPVILGGIEASLRRVTHYDYWQDCL
RKSILIDSGADLLIYGMGEKPITELCKRTKESKDSQDGAHLPLQKDIPHDIPQTAYIIRKKGSVPSEHSVIECVNEKPDI
ILHSHEACLKDKKKQAENFRFIEEESNKYEASRILQDTGNETVVVNPPYPPMSQGELDHSFDLPYTRMPHPKYKGKRIPA
FDMIKFSVNLHRGCFGGCAFCTISAHQGKFIVSRSKESILREVRAITEMPDFKGYLSDLGGPSANMYAMRGKDEKICRRC
KRPSCIHPKVCPNLNTDHRPLLDIYHSVDALPGIKKSFIGSGVRYDLLQYQSKDPAVNRSTAEYTRELIAHHVSGRLKVA
PEHTSDQVLQIMRKPSFSQFYDFKKTFDKINKELNMRQQIIPYFISSHPGCTEEDMAELAVITKKLDFHLEQVQDFTPTP
MTVATETWYTGYHPYTLQPVFSAKTPKEKLAQRMFFFWYKPEERRAIINELRKIGRADLIDKLYGKYKA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=651, Percent_Identity=42.7035330261137, Blast_Score=533, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 72332; Mature: 72332

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00092 N6_MTASE ; PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEYKLTDWLPTTKKEVEMRGWNELDVILFSGDAYVDHPSFGPAVIGRLLEAQGLKVAIV
CCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCEEECCCCCCHHHHHHHHHHCCCEEEEE
PQPNWRDDLRDFKKLGRPRLFFGVSAGCMDSMVNKYTANKRLRSEDAYTPDGRHDMRPEY
CCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PSIVYTQILKKIYPDVPVILGGIEASLRRVTHYDYWQDCLRKSILIDSGADLLIYGMGEK
CHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHEECCCCCEEEEECCCC
PITELCKRTKESKDSQDGAHLPLQKDIPHDIPQTAYIIRKKGSVPSEHSVIECVNEKPDI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCE
ILHSHEACLKDKKKQAENFRFIEEESNKYEASRILQDTGNETVVVNPPYPPMSQGELDHS
EEECCHHHHHHHHHHHHHCEEEHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
FDLPYTRMPHPKYKGKRIPAFDMIKFSVNLHRGCFGGCAFCTISAHQGKFIVSRSKESIL
CCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCHHHHH
REVRAITEMPDFKGYLSDLGGPSANMYAMRGKDEKICRRCKRPSCIHPKVCPNLNTDHRP
HHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCH
LLDIYHSVDALPGIKKSFIGSGVRYDLLQYQSKDPAVNRSTAEYTRELIAHHVSGRLKVA
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEC
PEHTSDQVLQIMRKPSFSQFYDFKKTFDKINKELNMRQQIIPYFISSHPGCTEEDMAELA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VITKKLDFHLEQVQDFTPTPMTVATETWYTGYHPYTLQPVFSAKTPKEKLAQRMFFFWYK
HHHHHHHHHHHHHHCCCCCCCEEEECCEECCCCCEEECCHHCCCCCHHHHHHHHHEEEEC
PEERRAIINELRKIGRADLIDKLYGKYKA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEYKLTDWLPTTKKEVEMRGWNELDVILFSGDAYVDHPSFGPAVIGRLLEAQGLKVAIV
CCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCEEECCCCCCHHHHHHHHHHCCCEEEEE
PQPNWRDDLRDFKKLGRPRLFFGVSAGCMDSMVNKYTANKRLRSEDAYTPDGRHDMRPEY
CCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PSIVYTQILKKIYPDVPVILGGIEASLRRVTHYDYWQDCLRKSILIDSGADLLIYGMGEK
CHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHEECCCCCEEEEECCCC
PITELCKRTKESKDSQDGAHLPLQKDIPHDIPQTAYIIRKKGSVPSEHSVIECVNEKPDI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCE
ILHSHEACLKDKKKQAENFRFIEEESNKYEASRILQDTGNETVVVNPPYPPMSQGELDHS
EEECCHHHHHHHHHHHHHCEEEHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
FDLPYTRMPHPKYKGKRIPAFDMIKFSVNLHRGCFGGCAFCTISAHQGKFIVSRSKESIL
CCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCHHHHH
REVRAITEMPDFKGYLSDLGGPSANMYAMRGKDEKICRRCKRPSCIHPKVCPNLNTDHRP
HHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCH
LLDIYHSVDALPGIKKSFIGSGVRYDLLQYQSKDPAVNRSTAEYTRELIAHHVSGRLKVA
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEC
PEHTSDQVLQIMRKPSFSQFYDFKKTFDKINKELNMRQQIIPYFISSHPGCTEEDMAELA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VITKKLDFHLEQVQDFTPTPMTVATETWYTGYHPYTLQPVFSAKTPKEKLAQRMFFFWYK
HHHHHHHHHHHHHHCCCCCCCEEEECCEECCCCCEEECCHHCCCCCHHHHHHHHHEEEEC
PEERRAIINELRKIGRADLIDKLYGKYKA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]