| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is nahA [H]
Identifier: 150004748
GI number: 150004748
Start: 2852471
End: 2854894
Strand: Reverse
Name: nahA [H]
Synonym: BVU_2209
Alternate gene names: 150004748
Gene position: 2854894-2852471 (Counterclockwise)
Preceding gene: 150004751
Following gene: 150004747
Centisome position: 55.29
GC content: 43.19
Gene sequence:
>2424_bases ATGAAGAAAAAGAGTCTGCCAGTATTTTTCGTTGGGTTATTAATGTGTGGATGCCAAATGAAAGAAGTAATCAATGAGTA CAATGTAGTTCCATTGCCTGTTACCATGAGCGAGCAGCAGGGACGTTTTTACCTGAACAGTGATGTTCCTATCGTCGTTA ACGCCTCACAAGAAGTGAAACACATTGCTTCCGGCCTGTCAACCACTCTCCTGGATATAGCCGGTCTCAAGCTGAAACCG ACTGACGAGTTACATGAAAATGTACCCTCCATTGTTTTTGACAGCATTCCGGGGATGGAAAAAGAAGCCTACAAGTTATC GGTCACCCCTCAACTGATAAAAATTACCGCATCGGCGCCTAACGGCTTTTACTATGGATTACAGACCCTGTATCAACTGT TGCCGGTGGATGTCTATTGTAAAGAAAGAGCACGTAATGCCGAATGGAGTGTACCTTGCGTTGAAATAGAAGACGCCCCA ACATTCCGCTATCGCGGAGCCATGCTGGATGTATGCCGCCATTTCGCATCTATAGATTATATCAAAAAATTCATAGATGT ATTGGCTGCACATAAAATGAACACCTTCCACTGGCACCTTACAGACGACCAAGGCTGGAGAATTGAAATCAAAAAATACC CCAAACTGACTGAGATCGGCTCTCAACGTTCAGAAACCATGGTGGATTATTTCTATACCCATTACCCATTCAAATATGAC GGCAAGCCCCACGGAGGTTTTTACACACAAGACGAAATAAAAGAAGTCGTTGCATACGCTCAAAGCAAATATATCACTGT CATTCCGGAGATAGAGTTACCTGGACATGCCTTGGCCGCTATCGCTTCCTACCCTGAATTGTCCTGTACTCCGGACAGCA CCTACGAAGTTTGCAAATTATGGGGTGTGTTTGACCAAGTATTCTGCCCTACCGACACCTTCTTCCAGTTTATGGAAGGA GTCATGGACGAAGTGGTGGAATTATTCCCAAGCTCTTATATACATATAGGTGGTGATGAATGTCCTAAAACAGCCTGGGA ACAATGTGAACATTGTCAAAAACTGATACGTGAACTGGGATTGGAAAATGACATCACTCCCAATCCCGTAGACGGAAGAA AGCATACGAAAGAAGAGAAATTACAAAGTTATATCGTAAGCCGTGTGGAAAAATACCTGAACAGCAAAGGACGTAATATC ATCGGTTGGGATGAAATACTGGAAGGAGGGCTTGCCCCCAACGCCACAGTGATGTCATGGCGTGGTGTGGAAGGCGGAAT GACCGCAGCCAAAGCCGGACATGATGCTATTATGACTCCTAATCCTTACGCTTACCTTGACCATTACCAGGAAGAACCGG AAATAGCTCCTGTTACTATCGGTGGATACAACACACTGAAAAAGACATACAGCTATAATCCTGTACCGGCTGATGCAGAC AGTTTGGTAAAACAGCACATCATTGGTGTACAGGCCAATTGCTGGGCAGAATATATGCCAACTGAGGATAACCGTGATTA TCAAATCTTCCCACGCCTGATCGCTATATCCGAAACCGGCTGGACTCCGATGAAGAAAAAGAATTTTACTTCATTCTGCA ACCGCATGGTTGAAGACTTCCAACGTCTGGAAGCAATGGGCGTAAAACCTTGCCTCAACTTCTTTGATGTAAATATCAAC ACCCGTGCTACCCAAGAAGGTGTACTGAATGTAGAGCTGGAAACATTCTATCCGGGAGCACAAATCTATTATACGACTCA TGGTGAGCAACCATCCATACATGCCAACTTATACAATCGTCCATTCCCATTGGACGGCACATACGACTTGAAAGCCGCTG CTTTCGTTAACGGCAAACAAATCGGTAAGGTTACTCATAAACAGCTTTACAAGAATTTAATCAGTGGGAAAAAATATGAA ATCATGCCCGAACCCAAAGGTATGAAAGGTGATATTTTAGGAGAAAATGATATATTGGGCGCAGACACTGTGACTTTAGG ACTGACCAATGGAAAACGTGGAAATAATGCCTCCTCCACCCCGTGGGTAGGTATCAGCCCAGACAATAATGACAAAGTTA CTTTTATAGTAGACTTTGAGAAAGCCACTATCCGTAAAATCAGATTCGGTACATTGTATAATGCAGCAGGTGGAATATTG CCGGTGAGCAAAGCTGTAGTCTATGTTTCCTCTTTAGACAACAAATTCGAGAAAGTAGCCGAAAAAGAATTCACTTACGA TATCAAAGAAAATACGTTCAGAGGCTTCGATGAAGAAATAGAATTTCCGGCACAAGAAGCGGTGAAGGTAAAAATAGAAT TTACAAGCGGAGGTAAAATACGCAATGGAATTGATTGCTATAGCCCTCATGATAAAAGCGAGGTACCCAGCACAATAGCT TTGGACGAAATAGAAATCTATTAA
Upstream 100 bases:
>100_bases TAATCTCTCTGAAAAACATGTTTATTCCGTTTTTATTGCTATTTTTGTCCAAAAAGAATTTCTATACCCCCTTTATTTAA AAACTTAACACAGATTTATT
Downstream 100 bases:
>100_bases TTACCTATTTATATAAGGAGAATTGAATTCCATTGTAATCCGGCTCAAAACCTTGTTTTCTATTTCCTGATTGAAAACTT AGCCGGATGACAATGGAATT
Product: beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MKKKSLPVFFVGLLMCGCQMKEVINEYNVVPLPVTMSEQQGRFYLNSDVPIVVNASQEVKHIASGLSTTLLDIAGLKLKP TDELHENVPSIVFDSIPGMEKEAYKLSVTPQLIKITASAPNGFYYGLQTLYQLLPVDVYCKERARNAEWSVPCVEIEDAP TFRYRGAMLDVCRHFASIDYIKKFIDVLAAHKMNTFHWHLTDDQGWRIEIKKYPKLTEIGSQRSETMVDYFYTHYPFKYD GKPHGGFYTQDEIKEVVAYAQSKYITVIPEIELPGHALAAIASYPELSCTPDSTYEVCKLWGVFDQVFCPTDTFFQFMEG VMDEVVELFPSSYIHIGGDECPKTAWEQCEHCQKLIRELGLENDITPNPVDGRKHTKEEKLQSYIVSRVEKYLNSKGRNI IGWDEILEGGLAPNATVMSWRGVEGGMTAAKAGHDAIMTPNPYAYLDHYQEEPEIAPVTIGGYNTLKKTYSYNPVPADAD SLVKQHIIGVQANCWAEYMPTEDNRDYQIFPRLIAISETGWTPMKKKNFTSFCNRMVEDFQRLEAMGVKPCLNFFDVNIN TRATQEGVLNVELETFYPGAQIYYTTHGEQPSIHANLYNRPFPLDGTYDLKAAAFVNGKQIGKVTHKQLYKNLISGKKYE IMPEPKGMKGDILGENDILGADTVTLGLTNGKRGNNASSTPWVGISPDNNDKVTFIVDFEKATIRKIRFGTLYNAAGGIL PVSKAVVYVSSLDNKFEKVAEKEFTYDIKENTFRGFDEEIEFPAQEAVKVKIEFTSGGKIRNGIDCYSPHDKSEVPSTIA LDEIEIY
Sequences:
>Translated_807_residues MKKKSLPVFFVGLLMCGCQMKEVINEYNVVPLPVTMSEQQGRFYLNSDVPIVVNASQEVKHIASGLSTTLLDIAGLKLKP TDELHENVPSIVFDSIPGMEKEAYKLSVTPQLIKITASAPNGFYYGLQTLYQLLPVDVYCKERARNAEWSVPCVEIEDAP TFRYRGAMLDVCRHFASIDYIKKFIDVLAAHKMNTFHWHLTDDQGWRIEIKKYPKLTEIGSQRSETMVDYFYTHYPFKYD GKPHGGFYTQDEIKEVVAYAQSKYITVIPEIELPGHALAAIASYPELSCTPDSTYEVCKLWGVFDQVFCPTDTFFQFMEG VMDEVVELFPSSYIHIGGDECPKTAWEQCEHCQKLIRELGLENDITPNPVDGRKHTKEEKLQSYIVSRVEKYLNSKGRNI IGWDEILEGGLAPNATVMSWRGVEGGMTAAKAGHDAIMTPNPYAYLDHYQEEPEIAPVTIGGYNTLKKTYSYNPVPADAD SLVKQHIIGVQANCWAEYMPTEDNRDYQIFPRLIAISETGWTPMKKKNFTSFCNRMVEDFQRLEAMGVKPCLNFFDVNIN TRATQEGVLNVELETFYPGAQIYYTTHGEQPSIHANLYNRPFPLDGTYDLKAAAFVNGKQIGKVTHKQLYKNLISGKKYE IMPEPKGMKGDILGENDILGADTVTLGLTNGKRGNNASSTPWVGISPDNNDKVTFIVDFEKATIRKIRFGTLYNAAGGIL PVSKAVVYVSSLDNKFEKVAEKEFTYDIKENTFRGFDEEIEFPAQEAVKVKIEFTSGGKIRNGIDCYSPHDKSEVPSTIA LDEIEIY >Mature_807_residues MKKKSLPVFFVGLLMCGCQMKEVINEYNVVPLPVTMSEQQGRFYLNSDVPIVVNASQEVKHIASGLSTTLLDIAGLKLKP TDELHENVPSIVFDSIPGMEKEAYKLSVTPQLIKITASAPNGFYYGLQTLYQLLPVDVYCKERARNAEWSVPCVEIEDAP TFRYRGAMLDVCRHFASIDYIKKFIDVLAAHKMNTFHWHLTDDQGWRIEIKKYPKLTEIGSQRSETMVDYFYTHYPFKYD GKPHGGFYTQDEIKEVVAYAQSKYITVIPEIELPGHALAAIASYPELSCTPDSTYEVCKLWGVFDQVFCPTDTFFQFMEG VMDEVVELFPSSYIHIGGDECPKTAWEQCEHCQKLIRELGLENDITPNPVDGRKHTKEEKLQSYIVSRVEKYLNSKGRNI IGWDEILEGGLAPNATVMSWRGVEGGMTAAKAGHDAIMTPNPYAYLDHYQEEPEIAPVTIGGYNTLKKTYSYNPVPADAD SLVKQHIIGVQANCWAEYMPTEDNRDYQIFPRLIAISETGWTPMKKKNFTSFCNRMVEDFQRLEAMGVKPCLNFFDVNIN TRATQEGVLNVELETFYPGAQIYYTTHGEQPSIHANLYNRPFPLDGTYDLKAAAFVNGKQIGKVTHKQLYKNLISGKKYE IMPEPKGMKGDILGENDILGADTVTLGLTNGKRGNNASSTPWVGISPDNNDKVTFIVDFEKATIRKIRFGTLYNAAGGIL PVSKAVVYVSSLDNKFEKVAEKEFTYDIKENTFRGFDEEIEFPAQEAVKVKIEFTSGGKIRNGIDCYSPHDKSEVPSTIA LDEIEIY
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI189181666, Length=467, Percent_Identity=25.9100642398287, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI4504373, Length=461, Percent_Identity=25.1626898047722, Blast_Score=146, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17569815, Length=437, Percent_Identity=24.4851258581236, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI281365639, Length=487, Percent_Identity=26.4887063655031, Blast_Score=117, Evalue=4e-26, Organism=Drosophila melanogaster, GI24657474, Length=487, Percent_Identity=26.4887063655031, Blast_Score=117, Evalue=4e-26, Organism=Drosophila melanogaster, GI24657468, Length=487, Percent_Identity=26.4887063655031, Blast_Score=116, Evalue=6e-26, Organism=Drosophila melanogaster, GI17647501, Length=487, Percent_Identity=26.4887063655031, Blast_Score=116, Evalue=6e-26, Organism=Drosophila melanogaster, GI45551090, Length=482, Percent_Identity=25.3112033195021, Blast_Score=113, Evalue=6e-25, Organism=Drosophila melanogaster, GI24653074, Length=482, Percent_Identity=25.3112033195021, Blast_Score=112, Evalue=8e-25, Organism=Drosophila melanogaster, GI17933586, Length=489, Percent_Identity=21.6768916155419, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 91046; Mature: 91046
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSLPVFFVGLLMCGCQMKEVINEYNVVPLPVTMSEQQGRFYLNSDVPIVVNASQEVK CCCCCCCHHHHHHHHHCCHHHHHHHHCCEEEEEEEECCCCCCEEECCCCCEEEECHHHHH HIASGLSTTLLDIAGLKLKPTDELHENVPSIVFDSIPGMEKEAYKLSVTPQLIKITASAP HHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCEEEECCCEEEEEEECCC NGFYYGLQTLYQLLPVDVYCKERARNAEWSVPCVEIEDAPTFRYRGAMLDVCRHFASIDY CCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHH IKKFIDVLAAHKMNTFHWHLTDDQGWRIEIKKYPKLTEIGSQRSETMVDYFYTHYPFKYD HHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCCEEEC GKPHGGFYTQDEIKEVVAYAQSKYITVIPEIELPGHALAAIASYPELSCTPDSTYEVCKL CCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH WGVFDQVFCPTDTFFQFMEGVMDEVVELFPSSYIHIGGDECPKTAWEQCEHCQKLIRELG HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC LENDITPNPVDGRKHTKEEKLQSYIVSRVEKYLNSKGRNIIGWDEILEGGLAPNATVMSW CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCCEEEEE RGVEGGMTAAKAGHDAIMTPNPYAYLDHYQEEPEIAPVTIGGYNTLKKTYSYNPVPADAD CCCCCCCCHHCCCCCCEECCCCCHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCCHH SLVKQHIIGVQANCWAEYMPTEDNRDYQIFPRLIAISETGWTPMKKKNFTSFCNRMVEDF HHHHHHHCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH QRLEAMGVKPCLNFFDVNINTRATQEGVLNVELETFYPGAQIYYTTHGEQPSIHANLYNR HHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCEEEECCCC PFPLDGTYDLKAAAFVNGKQIGKVTHKQLYKNLISGKKYEIMPEPKGMKGDILGENDILG CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC ADTVTLGLTNGKRGNNASSTPWVGISPDNNDKVTFIVDFEKATIRKIRFGTLYNAAGGIL CCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEECCHHHHHHEEECCHHCCCCCCE PVSKAVVYVSSLDNKFEKVAEKEFTYDIKENTFRGFDEEIEFPAQEAVKVKIEFTSGGKI EHHHHEEEHHHHHHHHHHHHHHHCEEEHHHCCCCCCCHHCCCCCCCEEEEEEEECCCCCC RNGIDCYSPHDKSEVPSTIALDEIEIY CCCCCCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKKKSLPVFFVGLLMCGCQMKEVINEYNVVPLPVTMSEQQGRFYLNSDVPIVVNASQEVK CCCCCCCHHHHHHHHHCCHHHHHHHHCCEEEEEEEECCCCCCEEECCCCCEEEECHHHHH HIASGLSTTLLDIAGLKLKPTDELHENVPSIVFDSIPGMEKEAYKLSVTPQLIKITASAP HHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCEEEECCCEEEEEEECCC NGFYYGLQTLYQLLPVDVYCKERARNAEWSVPCVEIEDAPTFRYRGAMLDVCRHFASIDY CCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHH IKKFIDVLAAHKMNTFHWHLTDDQGWRIEIKKYPKLTEIGSQRSETMVDYFYTHYPFKYD HHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCCEEEC GKPHGGFYTQDEIKEVVAYAQSKYITVIPEIELPGHALAAIASYPELSCTPDSTYEVCKL CCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH WGVFDQVFCPTDTFFQFMEGVMDEVVELFPSSYIHIGGDECPKTAWEQCEHCQKLIRELG HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC LENDITPNPVDGRKHTKEEKLQSYIVSRVEKYLNSKGRNIIGWDEILEGGLAPNATVMSW CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCCEEEEE RGVEGGMTAAKAGHDAIMTPNPYAYLDHYQEEPEIAPVTIGGYNTLKKTYSYNPVPADAD CCCCCCCCHHCCCCCCEECCCCCHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCCHH SLVKQHIIGVQANCWAEYMPTEDNRDYQIFPRLIAISETGWTPMKKKNFTSFCNRMVEDF HHHHHHHCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH QRLEAMGVKPCLNFFDVNINTRATQEGVLNVELETFYPGAQIYYTTHGEQPSIHANLYNR HHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCEEEECCCC PFPLDGTYDLKAAAFVNGKQIGKVTHKQLYKNLISGKKYEIMPEPKGMKGDILGENDILG CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC ADTVTLGLTNGKRGNNASSTPWVGISPDNNDKVTFIVDFEKATIRKIRFGTLYNAAGGIL CCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEECCHHHHHHEEECCHHCCCCCCE PVSKAVVYVSSLDNKFEKVAEKEFTYDIKENTFRGFDEEIEFPAQEAVKVKIEFTSGGKI EHHHHEEEHHHHHHHHHHHHHHHCEEEHHHCCCCCCCHHCCCCCCCEEEEEEEECCCCCC RNGIDCYSPHDKSEVPSTIALDEIEIY CCCCCCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]