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The map label for this gene is pcaC [H]

Identifier: 150004747

GI number: 150004747

Start: 2851407

End: 2852237

Strand: Reverse

Name: pcaC [H]

Synonym: BVU_2208

Alternate gene names: 150004747

Gene position: 2852237-2851407 (Counterclockwise)

Preceding gene: 150004748

Following gene: 150004746

Centisome position: 55.24

GC content: 45.25

Gene sequence:

>831_bases
ATGAACAAAGTCATTTTACTTTTAATATTCAGTATTTTAACAACAACCAGTATGGCACAAAAAAAGATCAAACAGACAGC
AGGACGCGACCAATTAGGAACATTTGCTCCTAAATTCGCAGAACTTAATGACGACATTCTTTTTGGAGAAGTGTGGAGCC
GCACCGAGCAACTCGGTCTTCGTGACCGCAGTTTAGTCACAATCACCTCACTCATCAGTCAAGGAATAACGGACAGTTCG
CTTACATTCCATCTCCAATCAGCCAAAAACAACGGTATTACGCGTACGGAAATTGCAGAGATCATCACTCACATCGGCTT
CTATGCAGGATGGCCGAAAGCATGGGCGGCATTCCGTCTTGCCAAAGAAGTATGGAATGAAGATATCTCTTGTAAAGATA
AAGATGAAAAAACAACGTTCCAACGCGAAATGATTTTTCCTATCGGAGAACCAAACACCGCTTATGCACAATATTTCACT
GGTAACAGTTACCTCGCCCCTATCTCTCGTGAACAGGCAAGCATTTCCAATGTCACCTTTGAACCACGCTGCCGTAACAA
CTGGCACATCCACCATGCAACTCAAGGTGGCGGACAAATGCTTATCGGCATAGCCGGCCGTGGCTGGTATCAAGAGGAAG
GTAAAGCAGCTGTTGAGATTCTTCCCGGCACAGTGATCCATATCCCTGCCAACGTAAAACATTGGCACGGTGCAGCCGCC
AACAGTTGGTTCGCCCACCTTGCATTCGAACTTTCCGGAGAAAACACATCCAATGAATGGTTAGAACCCGTAACCGATGA
AGAATACGACAAGATTCAAATGTTGCCTTGA

Upstream 100 bases:

>100_bases
AAATGGTATAAAAATCTGTAATCCGGGTACAATCTTATTTTTTTCAACTCCATACTTTTGTACATAGAATTTATATTGAA
AGACTTAAAATATGAACGCT

Downstream 100 bases:

>100_bases
ATGAGGCAACAAAAATAATTTGTATCGGTGCAGACTTTATATGTAGAGGCGCACAATTCTTTTACCAAGACACACGTGCG
ATTTTCAAATAAATTATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNKVILLLIFSILTTTSMAQKKIKQTAGRDQLGTFAPKFAELNDDILFGEVWSRTEQLGLRDRSLVTITSLISQGITDSS
LTFHLQSAKNNGITRTEIAEIITHIGFYAGWPKAWAAFRLAKEVWNEDISCKDKDEKTTFQREMIFPIGEPNTAYAQYFT
GNSYLAPISREQASISNVTFEPRCRNNWHIHHATQGGGQMLIGIAGRGWYQEEGKAAVEILPGTVIHIPANVKHWHGAAA
NSWFAHLAFELSGENTSNEWLEPVTDEEYDKIQMLP

Sequences:

>Translated_276_residues
MNKVILLLIFSILTTTSMAQKKIKQTAGRDQLGTFAPKFAELNDDILFGEVWSRTEQLGLRDRSLVTITSLISQGITDSS
LTFHLQSAKNNGITRTEIAEIITHIGFYAGWPKAWAAFRLAKEVWNEDISCKDKDEKTTFQREMIFPIGEPNTAYAQYFT
GNSYLAPISREQASISNVTFEPRCRNNWHIHHATQGGGQMLIGIAGRGWYQEEGKAAVEILPGTVIHIPANVKHWHGAAA
NSWFAHLAFELSGENTSNEWLEPVTDEEYDKIQMLP
>Mature_276_residues
MNKVILLLIFSILTTTSMAQKKIKQTAGRDQLGTFAPKFAELNDDILFGEVWSRTEQLGLRDRSLVTITSLISQGITDSS
LTFHLQSAKNNGITRTEIAEIITHIGFYAGWPKAWAAFRLAKEVWNEDISCKDKDEKTTFQREMIFPIGEPNTAYAQYFT
GNSYLAPISREQASISNVTFEPRCRNNWHIHHATQGGGQMLIGIAGRGWYQEEGKAAVEILPGTVIHIPANVKHWHGAAA
NSWFAHLAFELSGENTSNEWLEPVTDEEYDKIQMLP

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 31012; Mature: 31012

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVILLLIFSILTTTSMAQKKIKQTAGRDQLGTFAPKFAELNDDILFGEVWSRTEQLGL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCCCCEEEHHHHHHHHHHCC
RDRSLVTITSLISQGITDSSLTFHLQSAKNNGITRTEIAEIITHIGFYAGWPKAWAAFRL
CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
AKEVWNEDISCKDKDEKTTFQREMIFPIGEPNTAYAQYFTGNSYLAPISREQASISNVTF
HHHHHCCCCCCCCCCHHHHHHHHEEEECCCCCCEEEEEEECCCEECCCCCCCHHHHCCEE
EPRCRNNWHIHHATQGGGQMLIGIAGRGWYQEEGKAAVEILPGTVIHIPANVKHWHGAAA
CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEECCCCCHHCCCCC
NSWFAHLAFELSGENTSNEWLEPVTDEEYDKIQMLP
CCEEEEEEEEECCCCCCHHHCCCCCCCCCCEEECCC
>Mature Secondary Structure
MNKVILLLIFSILTTTSMAQKKIKQTAGRDQLGTFAPKFAELNDDILFGEVWSRTEQLGL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCCCCEEEHHHHHHHHHHCC
RDRSLVTITSLISQGITDSSLTFHLQSAKNNGITRTEIAEIITHIGFYAGWPKAWAAFRL
CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
AKEVWNEDISCKDKDEKTTFQREMIFPIGEPNTAYAQYFTGNSYLAPISREQASISNVTF
HHHHHCCCCCCCCCCHHHHHHHHEEEECCCCCCEEEEEEECCCEECCCCCCCHHHHCCEE
EPRCRNNWHIHHATQGGGQMLIGIAGRGWYQEEGKAAVEILPGTVIHIPANVKHWHGAAA
CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEECCCCCHHCCCCC
NSWFAHLAFELSGENTSNEWLEPVTDEEYDKIQMLP
CCEEEEEEEEECCCCCCHHHCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]