| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is dctA [C]
Identifier: 150004741
GI number: 150004741
Start: 2840964
End: 2842145
Strand: Reverse
Name: dctA [C]
Synonym: BVU_2202
Alternate gene names: 150004741
Gene position: 2842145-2840964 (Counterclockwise)
Preceding gene: 150004742
Following gene: 150004740
Centisome position: 55.05
GC content: 41.37
Gene sequence:
>1182_bases ATGAAAAAGTTTCTAAGTAATACTATCGTACAACTGCTTATTGCCGTAATTATCGGACTGTTGGCAGGCTTTGTTGTTAA TGACGCAGTGCTGGAAGTCGTTATCTGTATAAAGCACATCACGGGACAGATTATATTTTTCCTGGTTCCCCTTATTATTC TGGGATTCATAGCCCCCTCTATTGCCCATTTGCGCAGCAATGCATCAAAGATGCTTTTATTCGCTTTCGGCATAGCCTAC CTATCATCTATCGGAGCCTCTTTTTTCGGAGCAGCCGTAGGTTACAATGTGATTCCTTTTCTGCATATAGCCGATGATGC CAATACACTGAAAGCATTGCCGGAAAATTTACTAAAAATAGATATTCCACCGGTCATGAATGTTATGACGGCCCTTGTAC TGGCAGCTTTGATAGGACTTGCTACTGCTTGGGTTAAATCGGATGAAATATCAAAACTACTGGATACTTTTCAAAAGATG GTACTTGAATTGGTGAAAAGAGTACTGCTTCCCGTACTTCCCGTATTTATTGCCGCTAACTTCTGCATTCTTAGCTATCA GGGAGCTGTTACGAAGCAGTTACCGGTATTCCTCTCCGTATTGATAGTTGTTATTGTTTGTCATTTCATCTGGCTGTCAT TGCTTTATTTCATTGCAGCTGTTTACTCAAGAAAAAATAGTTGGCAGGTATTGAAATACTATGGTCCTGCTTACCTCACA GCATTAGGTACAATGTCTTCAGCAGCTACGCTGGGAGTGGCGTTGGAATGTGCCCGCAAAAGCCCTATCCTTCGAAAAGA AATCAGTGATGTGACGATACCTTTATTCGCCAATATACACCTATGCGGCTCTATCCTGACAGAAACCGTATTTGTACTCA CTGTATCCCAAATGCTTTATGGAAGTATGCCCAGTATATTACAAATTACTTTATTCATCCTGTTATTAGGATTATTCGCC ATCGGTGCACCGGGAGTACCGGGGGGAACAGTACTTGCCTCTTTAGGGCTAATCATCTCTGTTCTTCACTTTAATGAAGC CGGAACGGCATTACTACTTACGATTTTTGCATTACAGGACAGTTTCGGAACAGCTTGTAATATTACCGGAGATGGGGCAC TAACGCTTATTACAGATACTTTCGAAAAAAAGATAGCTTCGAAGCCGAAGGCTTTTAAATAA
Upstream 100 bases:
>100_bases GGCATTCTATTTTATTTTTCTATCTTTGTTCAAGCTATGAAATAACATACCTATACAGCAAACTTTTTCCGGATATTCAT CGTTTAACTGAAAAAAATAT
Downstream 100 bases:
>100_bases AGGCTCTCTAATAACTATCTTTTTACTTAAGGGTTTTGTAAAGTTACTTTTTTGATATTATTGCAAATATTCTCAACCCA TACTAACCACAAATCAAAAA
Product: glutamate/ aspartate transporter
Products: orotate [Cytoplasm]; fumarate [Cytoplasm]; malate [Cytoplasm]; Na (I) [Cytoplasm]; succinate [Cytoplasm] [C]
Alternate protein names: SodiumDicarboxylate Symporter Family Protein; Serine/Threonine Sodium Symporter; Na+/H+-Dicarboxylate Symporter; Serine/Threonine Transporter; Na+/H+ Dicarboxylate Symporter; Proton/Sodium-Glutamate Symport Protein; Na(+)/H(+)-Dicarboxylate Symporter; Glutamate/Aspartate Transporter; Glutamate/ Aspartate Transporter; Na+H+-Dicarboxylate Symporter; Proton Glutamate Symporter Homolog; Proton/Glutamate Symporter Family Protein; Transmembrane Symporter; Na+/H+ Dicarboxylate Symporte; Dicarboxylate/Amino Acid Transporter; DAACS Family Dicarboxylate/Amino AcidCation Symporter; DAACS Family Transporter; Sodium-Glutamate Symporter; NaH+Dicarboxylate Symporter
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKKFLSNTIVQLLIAVIIGLLAGFVVNDAVLEVVICIKHITGQIIFFLVPLIILGFIAPSIAHLRSNASKMLLFAFGIAY LSSIGASFFGAAVGYNVIPFLHIADDANTLKALPENLLKIDIPPVMNVMTALVLAALIGLATAWVKSDEISKLLDTFQKM VLELVKRVLLPVLPVFIAANFCILSYQGAVTKQLPVFLSVLIVVIVCHFIWLSLLYFIAAVYSRKNSWQVLKYYGPAYLT ALGTMSSAATLGVALECARKSPILRKEISDVTIPLFANIHLCGSILTETVFVLTVSQMLYGSMPSILQITLFILLLGLFA IGAPGVPGGTVLASLGLIISVLHFNEAGTALLLTIFALQDSFGTACNITGDGALTLITDTFEKKIASKPKAFK
Sequences:
>Translated_393_residues MKKFLSNTIVQLLIAVIIGLLAGFVVNDAVLEVVICIKHITGQIIFFLVPLIILGFIAPSIAHLRSNASKMLLFAFGIAY LSSIGASFFGAAVGYNVIPFLHIADDANTLKALPENLLKIDIPPVMNVMTALVLAALIGLATAWVKSDEISKLLDTFQKM VLELVKRVLLPVLPVFIAANFCILSYQGAVTKQLPVFLSVLIVVIVCHFIWLSLLYFIAAVYSRKNSWQVLKYYGPAYLT ALGTMSSAATLGVALECARKSPILRKEISDVTIPLFANIHLCGSILTETVFVLTVSQMLYGSMPSILQITLFILLLGLFA IGAPGVPGGTVLASLGLIISVLHFNEAGTALLLTIFALQDSFGTACNITGDGALTLITDTFEKKIASKPKAFK >Mature_393_residues MKKFLSNTIVQLLIAVIIGLLAGFVVNDAVLEVVICIKHITGQIIFFLVPLIILGFIAPSIAHLRSNASKMLLFAFGIAY LSSIGASFFGAAVGYNVIPFLHIADDANTLKALPENLLKIDIPPVMNVMTALVLAALIGLATAWVKSDEISKLLDTFQKM VLELVKRVLLPVLPVFIAANFCILSYQGAVTKQLPVFLSVLIVVIVCHFIWLSLLYFIAAVYSRKNSWQVLKYYGPAYLT ALGTMSSAATLGVALECARKSPILRKEISDVTIPLFANIHLCGSILTETVFVLTVSQMLYGSMPSILQITLFILLLGLFA IGAPGVPGGTVLASLGLIISVLHFNEAGTALLLTIFALQDSFGTACNITGDGALTLITDTFEKKIASKPKAFK
Specific function: Responsible For The Aerobic Transport Of The Dicarboxylates Fumarate And Malate And To A Lesser Extent Succinate, From The Periplasm Across The Inner Membrane. [C]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40254478, Length=242, Percent_Identity=28.9256198347107, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI169790839, Length=279, Percent_Identity=24.7311827956989, Blast_Score=66, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17537407, Length=253, Percent_Identity=28.4584980237154, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71996953, Length=272, Percent_Identity=25.7352941176471, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42231; Mature: 42231
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLSNTIVQLLIAVIIGLLAGFVVNDAVLEVVICIKHITGQIIFFLVPLIILGFIAPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAHLRSNASKMLLFAFGIAYLSSIGASFFGAAVGYNVIPFLHIADDANTLKALPENLLKI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHEE DIPPVMNVMTALVLAALIGLATAWVKSDEISKLLDTFQKMVLELVKRVLLPVLPVFIAAN CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCILSYQGAVTKQLPVFLSVLIVVIVCHFIWLSLLYFIAAVYSRKNSWQVLKYYGPAYLT HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCHHHHH ALGTMSSAATLGVALECARKSPILRKEISDVTIPLFANIHLCGSILTETVFVLTVSQMLY HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSMPSILQITLFILLLGLFAIGAPGVPGGTVLASLGLIISVLHFNEAGTALLLTIFALQD CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SFGTACNITGDGALTLITDTFEKKIASKPKAFK CCCCEEEECCCCCEEEHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKFLSNTIVQLLIAVIIGLLAGFVVNDAVLEVVICIKHITGQIIFFLVPLIILGFIAPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAHLRSNASKMLLFAFGIAYLSSIGASFFGAAVGYNVIPFLHIADDANTLKALPENLLKI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHEE DIPPVMNVMTALVLAALIGLATAWVKSDEISKLLDTFQKMVLELVKRVLLPVLPVFIAAN CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCILSYQGAVTKQLPVFLSVLIVVIVCHFIWLSLLYFIAAVYSRKNSWQVLKYYGPAYLT HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCHHHHH ALGTMSSAATLGVALECARKSPILRKEISDVTIPLFANIHLCGSILTETVFVLTVSQMLY HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSMPSILQITLFILLLGLFAIGAPGVPGGTVLASLGLIISVLHFNEAGTALLLTIFALQD CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SFGTACNITGDGALTLITDTFEKKIASKPKAFK CCCCEEEECCCCCEEEHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: orotate [Periplasm]; fumarate [Periplasm]; malate [Periplasm]; Na (I) [Periplasm]; succinate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + orotate [Periplasm] = Na (I) [Cytoplasm] + orotate [Cytoplasm] Na (I) [Periplasm] + fumarate [Periplasm] = Na (I) [Cytoplasm] + fumarate [Cytoplasm] Na (I) [Periplasm] + malate [Periplasm] = Na (I) [Cytoplasm] + malate [Cytoplasm] Na
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA